RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 NAP1L4Q99733 375 aaKnown RBP7.24□□□□□ -1.25
TDP1-215ENST00000556498 CRACR2AQ9BSW2 395 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 MAK16Q9BXY0 300 aaKnown RBP7.24□□□□□ -1.25
TDP1-215ENST00000556498 UNC45AQ9H3U1 944 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 GMPR2Q9P2T1 348 aaKnown RBP7.24□□□□□ -1.25
TDP1-215ENST00000556498 BLOC1S6Q9UL45 172 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 BCS1LQ9Y276 419 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 FAN1Q9Y2M0 1017 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 CECR2Q9BXF3 1484 aa7.24□□□□□ -1.25
TDP1-215ENST00000556498 IBTKQ9P2D0 1353 aaPredicted RBP7.23□□□□□ -1.25
TDP1-215ENST00000556498 LCE2BO14633 110 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 ZBTB39O15060 712 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 FRAT2O75474 233 aaPredicted RBP7.23□□□□□ -1.25
TDP1-215ENST00000556498 PARNO95453 639 aaKnown RBP7.23□□□□□ -1.25
TDP1-215ENST00000556498 FAM163BP0C2L3 166 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 HARSP12081 509 aaKnown RBP7.23□□□□□ -1.25
TDP1-215ENST00000556498 USP8P40818 1118 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 ZNF132P52740 706 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 IGBP1P78318 339 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 PTSQ03393 145 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 KRT72Q14CN4 511 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 HIF1AQ16665 826 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 CCDC178Q5BJE1 867 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 ARSJQ5FYB0 599 aaPredicted RBP7.23□□□□□ -1.25
TDP1-215ENST00000556498 MSL1Q68DK7 614 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 BICDL1Q6ZP65 573 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 ETFBKMTQ8IXQ9 262 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 CCDC26Q8TAB7 109 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 CCDC34Q96HJ3 373 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 SUSD3Q96L08 255 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 UIMC1Q96RL1 719 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 BACH2Q9BYV9 841 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 GRPEL1Q9HAV7 217 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 ANKIB1Q9P2G1 1089 aa7.23□□□□□ -1.25
TDP1-215ENST00000556498 MORC2Q9Y6X9 1032 aaPredicted RBP7.23□□□□□ -1.25
TDP1-215ENST00000556498 hCG_2014768A0A024R1R8 64 aa7.22□□□□□ -1.25
TDP1-215ENST00000556498 E2F6O75461 281 aa7.22□□□□□ -1.25
TDP1-215ENST00000556498 TPM1P09493 284 aa7.22□□□□□ -1.25
TDP1-215ENST00000556498 XBP1P17861 261 aa7.22□□□□□ -1.25
TDP1-215ENST00000556498 EIF1AXP47813 144 aaKnown RBP7.22□□□□□ -1.25
TDP1-215ENST00000556498 SH3BGRP55822 239 aaPredicted RBP7.22□□□□□ -1.25
TDP1-215ENST00000556498 EIF2B5Q13144 721 aaKnown RBP7.22□□□□□ -1.25
TDP1-215ENST00000556498 SLC5A9Q2M3M2 681 aa7.22□□□□□ -1.25
TDP1-215ENST00000556498 ACBD5Q5T8D3 534 aaPredicted RBP7.22□□□□□ -1.25
TDP1-215ENST00000556498 ALKBH2Q6NS38 261 aa7.22□□□□□ -1.25
TDP1-215ENST00000556498 GIMAP6Q6P9H5 292 aa7.22□□□□□ -1.25
TDP1-215ENST00000556498 CCDC80Q76M96 950 aa7.22□□□□□ -1.25
TDP1-215ENST00000556498 ARHGEF25Q86VW2 580 aa7.22□□□□□ -1.25
TDP1-215ENST00000556498 ABTB2Q8N961 1025 aa7.22□□□□□ -1.25
TDP1-215ENST00000556498 ZNF280CQ8ND82 737 aa7.22□□□□□ -1.25
TDP1-215ENST00000556498 ENOX1Q8TC92 643 aaKnown RBP7.22□□□□□ -1.25
TDP1-215ENST00000556498 MIPOL1Q8TD10 442 aa7.22□□□□□ -1.25
TDP1-215ENST00000556498 SMARCC1Q92922 1105 aaPredicted RBP7.22□□□□□ -1.25
TDP1-215ENST00000556498 IWS1Q96ST2 819 aa7.22□□□□□ -1.25
TDP1-215ENST00000556498 GAS2L1Q99501 681 aaPredicted RBP7.22□□□□□ -1.25
TDP1-215ENST00000556498 CRISPLD1Q9H336 500 aa7.22□□□□□ -1.25
TDP1-215ENST00000556498 SPATS2LQ9NUQ6 558 aaKnown RBP7.22□□□□□ -1.25
TDP1-215ENST00000556498 EXOC1Q9NV70 894 aa7.22□□□□□ -1.25
TDP1-215ENST00000556498 MAP3K20Q9NYL2 800 aaKnown RBP7.22□□□□□ -1.25
TDP1-215ENST00000556498 RABL2BQ9UNT1 228 aa7.22□□□□□ -1.25
TDP1-215ENST00000556498 ATP8A1Q9Y2Q0 1164 aa7.22□□□□□ -1.25
TDP1-215ENST00000556498 ERBB4Q15303 1308 aa7.22□□□□□ -1.25
TDP1-215ENST00000556498 A0A1W2PNR3 127 aa7.21□□□□□ -1.26
TDP1-215ENST00000556498 SLC35F4A4IF30 521 aa7.21□□□□□ -1.26
TDP1-215ENST00000556498 U2AF1L5P0DN76 240 aaPredicted RBP7.21□□□□□ -1.26
TDP1-215ENST00000556498 MYBL2P10244 700 aa7.21□□□□□ -1.26
TDP1-215ENST00000556498 TNNT1P13805 278 aa7.21□□□□□ -1.26
TDP1-215ENST00000556498 MARSP56192 900 aaKnown RBP7.21□□□□□ -1.26
TDP1-215ENST00000556498 U2AF1Q01081 240 aaKnown RBP eCLIP7.21□□□□□ -1.26
TDP1-215ENST00000556498 PRPF4BQ13523 1007 aaKnown RBP7.21□□□□□ -1.26
TDP1-215ENST00000556498 TRIM29Q14134 588 aa7.21□□□□□ -1.26
TDP1-215ENST00000556498 IER5Q5VY09 327 aa7.21□□□□□ -1.26
TDP1-215ENST00000556498 LEKR1Q6ZMV7 388 aa7.21□□□□□ -1.26
TDP1-215ENST00000556498 ELOA2Q8IYF1 753 aaPredicted RBP7.21□□□□□ -1.26
TDP1-215ENST00000556498 MYO1HQ8N1T3 1032 aa7.21□□□□□ -1.26
TDP1-215ENST00000556498 PHC3Q8NDX5 983 aa7.21□□□□□ -1.26
TDP1-215ENST00000556498 GPAMQ9HCL2 828 aa7.21□□□□□ -1.26
TDP1-215ENST00000556498 NEUROD4Q9HD90 331 aa7.21□□□□□ -1.26
TDP1-215ENST00000556498 HOXC10Q9NYD6 342 aa7.21□□□□□ -1.26
TDP1-215ENST00000556498 PPP1R1BQ9UD71 204 aaPredicted RBP7.21□□□□□ -1.26
TDP1-215ENST00000556498 DMGDHQ9UI17 866 aaKnown RBP7.21□□□□□ -1.26
TDP1-215ENST00000556498 ACAD8Q9UKU7 415 aa7.21□□□□□ -1.26
TDP1-215ENST00000556498 TRAK1Q9UPV9 953 aa7.21□□□□□ -1.26
TDP1-215ENST00000556498 ZNF652Q9Y2D9 606 aa7.21□□□□□ -1.26
TDP1-215ENST00000556498 TRIM64CA6NLI5 447 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 F8VZ95 297 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 TGFBR3LH3BV60 316 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 FZD6O60353 706 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 KRT38O76015 456 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 MICAL2O94851 1124 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 SNRPBP14678 240 aaKnown RBP7.2□□□□□ -1.26
TDP1-215ENST00000556498 RASSF7Q02833 373 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 DEUP1Q05D60 604 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 RAD51AP2Q09MP3 1159 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 SEPT7Q16181 437 aaKnown RBP7.2□□□□□ -1.26
TDP1-215ENST00000556498 DBN1Q16643 649 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 ATP2B3Q16720 1220 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 TTC31Q49AM3 519 aaPredicted RBP7.2□□□□□ -1.26
TDP1-215ENST00000556498 PARP10Q53GL7 1025 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 IQCEQ6IPM2 695 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms