RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 PPP4R3BQ5MIZ7 849 aa8.42□□□□□ -1.06
PSEN1-216ENST00000556066 POTEEQ6S8J3 1075 aa8.42□□□□□ -1.06
PSEN1-216ENST00000556066 C15orf52Q6ZUT6 534 aaKnown RBP8.42□□□□□ -1.06
PSEN1-216ENST00000556066 RASAL3Q86YV0 1011 aa8.42□□□□□ -1.06
PSEN1-216ENST00000556066 APOBEC3FQ8IUX4 373 aaKnown RBP8.42□□□□□ -1.06
PSEN1-216ENST00000556066 CERS5Q8N5B7 392 aa8.42□□□□□ -1.06
PSEN1-216ENST00000556066 SSH1Q8WYL5 1049 aa8.42□□□□□ -1.06
PSEN1-216ENST00000556066 PUS3Q9BZE2 481 aaKnown RBP8.42□□□□□ -1.06
PSEN1-216ENST00000556066 BICC1Q9H694 974 aaKnown RBP8.42□□□□□ -1.06
PSEN1-216ENST00000556066 IRS2Q9Y4H2 1338 aa8.42□□□□□ -1.06
PSEN1-216ENST00000556066 MYH13Q9UKX3 1938 aa8.41□□□□□ -1.06
PSEN1-216ENST00000556066 PTPRCP08575 1304 aa8.41□□□□□ -1.06
PSEN1-216ENST00000556066 CLRN2A0PK11 232 aa8.41□□□□□ -1.06
PSEN1-216ENST00000556066 DPYSL4O14531 572 aa8.41□□□□□ -1.06
PSEN1-216ENST00000556066 MYO1BO43795 1136 aa8.41□□□□□ -1.06
PSEN1-216ENST00000556066 IL1R1P14778 569 aa8.41□□□□□ -1.06
PSEN1-216ENST00000556066 GYG1P46976 350 aa8.41□□□□□ -1.06
PSEN1-216ENST00000556066 MMP14P50281 582 aa8.41□□□□□ -1.06
PSEN1-216ENST00000556066 SLFN5Q08AF3 891 aa8.41□□□□□ -1.06
PSEN1-216ENST00000556066 CFAP100Q494V2 611 aa8.41□□□□□ -1.06
PSEN1-216ENST00000556066 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.41□□□□□ -1.06
PSEN1-216ENST00000556066 VPS37DQ86XT2 251 aa8.41□□□□□ -1.06
PSEN1-216ENST00000556066 CDCA7LQ96GN5 454 aa8.41□□□□□ -1.06
PSEN1-216ENST00000556066 KAZALD1Q96I82 304 aa8.41□□□□□ -1.06
PSEN1-216ENST00000556066 CSRNP1Q96S65 589 aa8.41□□□□□ -1.06
PSEN1-216ENST00000556066 VEZTQ9HBM0 779 aa8.41□□□□□ -1.06
PSEN1-216ENST00000556066 SMC4Q9NTJ3 1288 aa8.41□□□□□ -1.06
PSEN1-216ENST00000556066 RNF186Q9NXI6 227 aa8.41□□□□□ -1.06
PSEN1-216ENST00000556066 PCDHAC2Q9Y5I4 1007 aa8.41□□□□□ -1.06
PSEN1-216ENST00000556066 UTYO14607 1347 aa8.4□□□□□ -1.06
PSEN1-216ENST00000556066 MROH5Q6ZUA9 1318 aa8.4□□□□□ -1.06
PSEN1-216ENST00000556066 FRAT2O75474 233 aaPredicted RBP8.4□□□□□ -1.06
PSEN1-216ENST00000556066 HIBADHP31937 336 aaKnown RBP8.4□□□□□ -1.06
PSEN1-216ENST00000556066 SOX10P56693 466 aa8.4□□□□□ -1.06
PSEN1-216ENST00000556066 UBE4AQ14139 1066 aa8.4□□□□□ -1.06
PSEN1-216ENST00000556066 METTL24Q5JXM2 366 aa8.4□□□□□ -1.06
PSEN1-216ENST00000556066 MFSD14BQ5SR56 506 aa8.4□□□□□ -1.06
PSEN1-216ENST00000556066 ARMC9Q7Z3E5 817 aa8.4□□□□□ -1.06
PSEN1-216ENST00000556066 ZBED3Q96IU2 234 aaPredicted RBP8.4□□□□□ -1.06
PSEN1-216ENST00000556066 DEFB129Q9H1M3 183 aa8.4□□□□□ -1.06
PSEN1-216ENST00000556066 SAGE1Q9NXZ1 904 aa8.4□□□□□ -1.06
PSEN1-216ENST00000556066 ANGEL1Q9UNK9 670 aaKnown RBP8.4□□□□□ -1.06
PSEN1-216ENST00000556066 FZD1Q9UP38 647 aa8.4□□□□□ -1.06
PSEN1-216ENST00000556066 IQSEC3Q9UPP2 1182 aaPredicted RBP8.4□□□□□ -1.06
PSEN1-216ENST00000556066 RIPOR2Q9Y4F9 1068 aa8.4□□□□□ -1.06
PSEN1-216ENST00000556066 ARAP2Q8WZ64 1704 aa8.4□□□□□ -1.07
PSEN1-216ENST00000556066 SPDYE16A6NNV3 312 aaPredicted RBP8.39□□□□□ -1.07
PSEN1-216ENST00000556066 PTPN12Q05209 780 aaKnown RBP8.39□□□□□ -1.07
PSEN1-216ENST00000556066 CHAF1AQ13111 956 aaPredicted RBP8.39□□□□□ -1.07
PSEN1-216ENST00000556066 LRRC24Q50LG9 513 aa8.39□□□□□ -1.07
PSEN1-216ENST00000556066 ANKRD44Q8N8A2 993 aa8.39□□□□□ -1.07
PSEN1-216ENST00000556066 TDRD7Q8NHU6 1098 aaKnown RBP8.39□□□□□ -1.07
PSEN1-216ENST00000556066 KLHDC4Q8TBB5 520 aa8.39□□□□□ -1.07
PSEN1-216ENST00000556066 OXER1Q8TDS5 423 aa8.39□□□□□ -1.07
PSEN1-216ENST00000556066 FAM84BQ96KN1 310 aaPredicted RBP8.39□□□□□ -1.07
PSEN1-216ENST00000556066 PRMT6Q96LA8 375 aaPredicted RBP8.39□□□□□ -1.07
PSEN1-216ENST00000556066 USP44Q9H0E7 712 aa8.39□□□□□ -1.07
PSEN1-216ENST00000556066 TTF2Q9UNY4 1162 aaKnown RBP8.39□□□□□ -1.07
PSEN1-216ENST00000556066 FAM205AQ6ZU69 1335 aa8.38□□□□□ -1.07
PSEN1-216ENST00000556066 PPP1R12BO60237 982 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-216ENST00000556066 TBC1D8O95759 1140 aa8.38□□□□□ -1.07
PSEN1-216ENST00000556066 FKBP1AP62942 108 aaKnown RBP8.38□□□□□ -1.07
PSEN1-216ENST00000556066 ALDH1L2Q3SY69 923 aa8.38□□□□□ -1.07
PSEN1-216ENST00000556066 RABL6Q3YEC7 729 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-216ENST00000556066 CAVIN4Q5BKX8 364 aa8.38□□□□□ -1.07
PSEN1-216ENST00000556066 MTMR14Q8NCE2 650 aa8.38□□□□□ -1.07
PSEN1-216ENST00000556066 IRX2Q9BZI1 471 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-216ENST00000556066 AK9Q5TCS8 1911 aa8.38□□□□□ -1.07
PSEN1-216ENST00000556066 CEP290O15078 2479 aa8.38□□□□□ -1.07
PSEN1-216ENST00000556066 COL1A1P02452 1464 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-216ENST00000556066 AOX1Q06278 1338 aa8.37□□□□□ -1.07
PSEN1-216ENST00000556066 HRO43593 1189 aa8.37□□□□□ -1.07
PSEN1-216ENST00000556066 PDE8BO95263 885 aa8.37□□□□□ -1.07
PSEN1-216ENST00000556066 MAP3K9P80192 1104 aa8.37□□□□□ -1.07
PSEN1-216ENST00000556066 RASA3Q14644 834 aa8.37□□□□□ -1.07
PSEN1-216ENST00000556066 SUPT20HL1Q3ZLR7 823 aa8.37□□□□□ -1.07
PSEN1-216ENST00000556066 NBPF12Q5TAG4 269 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-216ENST00000556066 PRPF38BQ5VTL8 546 aaKnown RBP8.37□□□□□ -1.07
PSEN1-216ENST00000556066 PTCD2Q8WV60 388 aaKnown RBP8.37□□□□□ -1.07
PSEN1-216ENST00000556066 SLC10A4Q96EP9 437 aa8.37□□□□□ -1.07
PSEN1-216ENST00000556066 TDRD3Q9H7E2 651 aaKnown RBP8.37□□□□□ -1.07
PSEN1-216ENST00000556066 NOB1Q9ULX3 412 aaKnown RBP8.37□□□□□ -1.07
PSEN1-216ENST00000556066 PPP2R3BQ9Y5P8 575 aa8.37□□□□□ -1.07
PSEN1-216ENST00000556066 OTOFQ9HC10 1997 aa8.37□□□□□ -1.07
PSEN1-216ENST00000556066 SSC5DA1L4H1 1573 aa8.36□□□□□ -1.07
PSEN1-216ENST00000556066 TCP10L2B9ZVM9 353 aa8.36□□□□□ -1.07
PSEN1-216ENST00000556066 IFIT1P09914 478 aaKnown RBP8.36□□□□□ -1.07
PSEN1-216ENST00000556066 UBTFL1P0CB47 393 aaPredicted RBP8.36□□□□□ -1.07
PSEN1-216ENST00000556066 CRKP46108 304 aa8.36□□□□□ -1.07
PSEN1-216ENST00000556066 BCAMP50895 628 aa8.36□□□□□ -1.07
PSEN1-216ENST00000556066 SREBF2Q12772 1141 aa8.36□□□□□ -1.07
PSEN1-216ENST00000556066 TNFAIP1Q13829 316 aa8.36□□□□□ -1.07
PSEN1-216ENST00000556066 GRIK5Q16478 980 aa8.36□□□□□ -1.07
PSEN1-216ENST00000556066 LDLRAD1Q5T700 205 aa8.36□□□□□ -1.07
PSEN1-216ENST00000556066 SPRYD7Q5W111 196 aa8.36□□□□□ -1.07
PSEN1-216ENST00000556066 SMYD5Q6GMV2 418 aa8.36□□□□□ -1.07
PSEN1-216ENST00000556066 FBXO33Q7Z6M2 555 aa8.36□□□□□ -1.07
PSEN1-216ENST00000556066 DZIP1LQ8IYY4 767 aaKnown RBP8.36□□□□□ -1.07
PSEN1-216ENST00000556066 VGLL2Q8N8G2 317 aa8.36□□□□□ -1.07
PSEN1-216ENST00000556066 CLMNQ96JQ2 1002 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms