RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 ANAPC4Q9UJX5 808 aa19.65■□□□□ 0.74
SYNE3-204ENST00000555759 FAM173BQ6P4H8 233 aa19.65■□□□□ 0.74
SYNE3-204ENST00000555759 EXOC4Q96A65 974 aa19.65■□□□□ 0.74
SYNE3-204ENST00000555759 FERMT2Q96AC1 680 aa19.65■□□□□ 0.74
SYNE3-204ENST00000555759 NOC4LQ9BVI4 516 aaKnown RBP19.65■□□□□ 0.74
SYNE3-204ENST00000555759 APBA1Q02410 837 aa19.65■□□□□ 0.74
SYNE3-204ENST00000555759 BCAS4Q8TDM0 211 aa19.65■□□□□ 0.74
SYNE3-204ENST00000555759 PPP1R12CQ9BZL4 782 aa19.65■□□□□ 0.74
SYNE3-204ENST00000555759 VPS16Q9H269 839 aa19.65■□□□□ 0.74
SYNE3-204ENST00000555759 KRT9P35527 623 aa19.65■□□□□ 0.74
SYNE3-204ENST00000555759 SMARCC2Q8TAQ2 1214 aa19.65■□□□□ 0.74
SYNE3-204ENST00000555759 PPP2R2CQ9Y2T4 447 aa19.65■□□□□ 0.74
SYNE3-204ENST00000555759 A0A087WUV0 522 aaPredicted RBP19.65■□□□□ 0.74
SYNE3-204ENST00000555759 GNAT2P19087 354 aa19.65■□□□□ 0.74
SYNE3-204ENST00000555759 SEL1L2Q5TEA6 688 aa19.65■□□□□ 0.74
SYNE3-204ENST00000555759 GSTA5Q7RTV2 222 aa19.65■□□□□ 0.74
SYNE3-204ENST00000555759 TDRD7Q8NHU6 1098 aaKnown RBP19.65■□□□□ 0.74
SYNE3-204ENST00000555759 USHBP1Q8N6Y0 703 aa19.64■□□□□ 0.74
SYNE3-204ENST00000555759 PAXIP1Q6ZW49 1069 aaPredicted RBP19.64■□□□□ 0.73
SYNE3-204ENST00000555759 LIG3P49916 1009 aa19.64■□□□□ 0.73
SYNE3-204ENST00000555759 DTHD1Q6ZMT9 781 aa19.64■□□□□ 0.73
SYNE3-204ENST00000555759 CCDC25Q86WR0 208 aa19.64■□□□□ 0.73
SYNE3-204ENST00000555759 VSIG1Q86XK7 387 aa19.64■□□□□ 0.73
SYNE3-204ENST00000555759 RNF10Q8N5U6 811 aaKnown RBP19.64■□□□□ 0.73
SYNE3-204ENST00000555759 MICAL1Q8TDZ2 1067 aa19.64■□□□□ 0.73
SYNE3-204ENST00000555759 HDAC9Q9UKV0 1011 aa19.64■□□□□ 0.73
SYNE3-204ENST00000555759 LUC7L3O95232 432 aaKnown RBP19.64■□□□□ 0.73
SYNE3-204ENST00000555759 SERPINA10Q9UK55 444 aa19.64■□□□□ 0.73
SYNE3-204ENST00000555759 LDHCP07864 332 aa19.63■□□□□ 0.73
SYNE3-204ENST00000555759 CRNKL1Q9BZJ0 848 aaKnown RBP19.63■□□□□ 0.73
SYNE3-204ENST00000555759 VEZTQ9HBM0 779 aa19.63■□□□□ 0.73
SYNE3-204ENST00000555759 KIAA1468Q9P260 1216 aa19.63■□□□□ 0.73
SYNE3-204ENST00000555759 PAK1Q13153 545 aa19.63■□□□□ 0.73
SYNE3-204ENST00000555759 KRT79Q5XKE5 535 aa19.63■□□□□ 0.73
SYNE3-204ENST00000555759 ADALQ6DHV7 355 aa19.63■□□□□ 0.73
SYNE3-204ENST00000555759 PROSER2Q86WR7 435 aaPredicted RBP19.63■□□□□ 0.73
SYNE3-204ENST00000555759 RABEP2Q9H5N1 569 aa19.63■□□□□ 0.73
SYNE3-204ENST00000555759 PLCD1P51178 756 aa19.62■□□□□ 0.73
SYNE3-204ENST00000555759 SNRPA1P09661 255 aaKnown RBP19.62■□□□□ 0.73
SYNE3-204ENST00000555759 RASSF2P50749 326 aa19.62■□□□□ 0.73
SYNE3-204ENST00000555759 PHLDB2Q86SQ0 1253 aa19.62■□□□□ 0.73
SYNE3-204ENST00000555759 SNCBQ16143 134 aa19.62■□□□□ 0.73
SYNE3-204ENST00000555759 ATP6V0A2Q9Y487 856 aa19.62■□□□□ 0.73
SYNE3-204ENST00000555759 RGS12O14924 1447 aa19.62■□□□□ 0.73
SYNE3-204ENST00000555759 PA2G4Q9UQ80 394 aaKnown RBP19.62■□□□□ 0.73
SYNE3-204ENST00000555759 JRKLQ9Y4A0 524 aa19.62■□□□□ 0.73
SYNE3-204ENST00000555759 SH2D4BQ5SQS7 431 aa19.61■□□□□ 0.73
SYNE3-204ENST00000555759 SLC4A4Q9Y6R1 1079 aa19.61■□□□□ 0.73
SYNE3-204ENST00000555759 MRC2Q9UBG0 1479 aa19.61■□□□□ 0.73
SYNE3-204ENST00000555759 PHLPP2Q6ZVD8 1323 aa19.61■□□□□ 0.73
SYNE3-204ENST00000555759 ATP5J2-PTCD1G3V325 749 aa19.61■□□□□ 0.73
SYNE3-204ENST00000555759 PTCD1O75127 700 aaKnown RBP19.61■□□□□ 0.73
SYNE3-204ENST00000555759 ATP2B3Q16720 1220 aa19.61■□□□□ 0.73
SYNE3-204ENST00000555759 TEX13AQ9BXU3 409 aaPredicted RBP19.61■□□□□ 0.73
SYNE3-204ENST00000555759 CRACR2BQ8N4Y2 399 aaPredicted RBP19.61■□□□□ 0.73
SYNE3-204ENST00000555759 SPATS2LQ9NUQ6 558 aaKnown RBP19.61■□□□□ 0.73
SYNE3-204ENST00000555759 BAG3O95817 575 aa19.61■□□□□ 0.73
SYNE3-204ENST00000555759 RBM5P52756 815 aaKnown RBP eCLIP19.61■□□□□ 0.73
SYNE3-204ENST00000555759 SLC9C2Q5TAH2 1124 aa19.61■□□□□ 0.73
SYNE3-204ENST00000555759 PDE11AQ9HCR9 933 aa19.61■□□□□ 0.73
SYNE3-204ENST00000555759 C6orf50Q9HD87 102 aa19.61■□□□□ 0.73
SYNE3-204ENST00000555759 BIVM-ERCC5R4GMW8 1640 aa19.61■□□□□ 0.73
SYNE3-204ENST00000555759 POSTNQ15063 836 aa19.6■□□□□ 0.73
SYNE3-204ENST00000555759 TERF2Q15554 542 aa19.6■□□□□ 0.73
SYNE3-204ENST00000555759 BICDL1Q6ZP65 573 aa19.6■□□□□ 0.73
SYNE3-204ENST00000555759 CHST3Q7LGC8 479 aa19.6■□□□□ 0.73
SYNE3-204ENST00000555759 RAB3IPQ96QF0 476 aaPredicted RBP19.6■□□□□ 0.73
SYNE3-204ENST00000555759 TMEM87BQ96K49 555 aa19.6■□□□□ 0.73
SYNE3-204ENST00000555759 RBBP5Q15291 538 aaKnown RBP19.6■□□□□ 0.73
SYNE3-204ENST00000555759 MCUR1Q96AQ8 359 aa19.6■□□□□ 0.73
SYNE3-204ENST00000555759 POLKQ9UBT6 870 aa19.6■□□□□ 0.73
SYNE3-204ENST00000555759 SLF1Q9BQI6 1058 aa19.6■□□□□ 0.73
SYNE3-204ENST00000555759 TMOD3Q9NYL9 352 aa19.6■□□□□ 0.73
SYNE3-204ENST00000555759 GPATCH8Q9UKJ3 1502 aaKnown RBP19.59■□□□□ 0.73
SYNE3-204ENST00000555759 MAGEA1P43355 309 aa19.59■□□□□ 0.73
SYNE3-204ENST00000555759 RBM6P78332 1123 aaKnown RBP19.59■□□□□ 0.73
SYNE3-204ENST00000555759 TRIM58Q8NG06 486 aa19.59■□□□□ 0.73
SYNE3-204ENST00000555759 MTMR6Q9Y217 621 aa19.59■□□□□ 0.73
SYNE3-204ENST00000555759 STX10O60499 249 aa19.59■□□□□ 0.73
SYNE3-204ENST00000555759 SLC9C1Q4G0N8 1177 aa19.59■□□□□ 0.73
SYNE3-204ENST00000555759 GKAP1Q5VSY0 366 aaPredicted RBP19.59■□□□□ 0.73
SYNE3-204ENST00000555759 SRGAP1Q7Z6B7 1085 aa19.59■□□□□ 0.73
SYNE3-204ENST00000555759 RNF168Q8IYW5 571 aaPredicted RBP19.59■□□□□ 0.73
SYNE3-204ENST00000555759 RIPOR2Q9Y4F9 1068 aa19.59■□□□□ 0.73
SYNE3-204ENST00000555759 PPP1R13BQ96KQ4 1090 aa19.59■□□□□ 0.73
SYNE3-204ENST00000555759 CARD14Q9BXL6 1004 aa19.59■□□□□ 0.73
SYNE3-204ENST00000555759 CSRNP2Q9H175 543 aa19.59■□□□□ 0.73
SYNE3-204ENST00000555759 POLR2DO15514 142 aaKnown RBP19.58■□□□□ 0.73
SYNE3-204ENST00000555759 HIP1RO75146 1068 aa19.58■□□□□ 0.73
SYNE3-204ENST00000555759 DEXIO95424 95 aa19.58■□□□□ 0.73
SYNE3-204ENST00000555759 PRDM11Q9NQV5 511 aa19.58■□□□□ 0.73
SYNE3-204ENST00000555759 CNNM4Q6P4Q7 775 aa19.58■□□□□ 0.73
SYNE3-204ENST00000555759 ZBTB3Q9H5J0 574 aa19.58■□□□□ 0.73
SYNE3-204ENST00000555759 VAT1LQ9HCJ6 419 aa19.58■□□□□ 0.73
SYNE3-204ENST00000555759 RPL13P26373 211 aaKnown RBP19.58■□□□□ 0.73
SYNE3-204ENST00000555759 HEATR3Q7Z4Q2 680 aa19.58■□□□□ 0.73
SYNE3-204ENST00000555759 NUCKS1Q9H1E3 243 aaKnown RBP19.58■□□□□ 0.73
SYNE3-204ENST00000555759 CABP5Q9NP86 173 aa19.58■□□□□ 0.73
SYNE3-204ENST00000555759 ANXA1P04083 346 aa19.58■□□□□ 0.72
SYNE3-204ENST00000555759 MCM7P33993 719 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms