RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 CCDC82Q8N4S0 544 aa7.86□□□□□ -1.15
SNX6-204ENST00000555541 LRRN4CLQ8ND94 238 aa7.86□□□□□ -1.15
SNX6-204ENST00000555541 BHLHE22Q8NFJ8 381 aaPredicted RBP7.86□□□□□ -1.15
SNX6-204ENST00000555541 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.86□□□□□ -1.15
SNX6-204ENST00000555541 PPP1R15AO75807 674 aaPredicted RBP7.85□□□□□ -1.15
SNX6-204ENST00000555541 TTC16Q8NEE8 873 aa7.85□□□□□ -1.15
SNX6-204ENST00000555541 AMOTL2Q9Y2J4 779 aa7.85□□□□□ -1.15
SNX6-204ENST00000555541 POLR3DP05423 398 aaPredicted RBP7.84□□□□□ -1.15
SNX6-204ENST00000555541 ZNF865P0CJ78 1059 aaPredicted RBP7.84□□□□□ -1.15
SNX6-204ENST00000555541 CD96P40200 585 aa7.84□□□□□ -1.15
SNX6-204ENST00000555541 ASPAP45381 313 aa7.84□□□□□ -1.15
SNX6-204ENST00000555541 USP5P45974 858 aa7.84□□□□□ -1.15
SNX6-204ENST00000555541 SF3B2Q13435 895 aaKnown RBP7.84□□□□□ -1.15
SNX6-204ENST00000555541 KSR1Q8IVT5 923 aa7.84□□□□□ -1.15
SNX6-204ENST00000555541 TCF12Q99081 682 aa7.84□□□□□ -1.15
SNX6-204ENST00000555541 SYNGAP1Q96PV0 1343 aa7.83□□□□□ -1.16
SNX6-204ENST00000555541 PCDH1Q08174 1060 aa7.83□□□□□ -1.16
SNX6-204ENST00000555541 POU4F3Q15319 338 aa7.83□□□□□ -1.16
SNX6-204ENST00000555541 PKN1Q16512 942 aa7.83□□□□□ -1.16
SNX6-204ENST00000555541 AKAP4Q5JQC9 854 aa7.83□□□□□ -1.16
SNX6-204ENST00000555541 CCNJLQ8IV13 435 aa7.83□□□□□ -1.16
SNX6-204ENST00000555541 NETO1Q8TDF5 533 aa7.83□□□□□ -1.16
SNX6-204ENST00000555541 CLEC4MQ9H2X3 399 aaPredicted RBP7.83□□□□□ -1.16
SNX6-204ENST00000555541 VAV3Q9UKW4 847 aa7.83□□□□□ -1.16
SNX6-204ENST00000555541 A0A1W2PP55 124 aa7.82□□□□□ -1.16
SNX6-204ENST00000555541 CYP11A1P05108 521 aa7.82□□□□□ -1.16
SNX6-204ENST00000555541 GRIA4P48058 902 aa7.82□□□□□ -1.16
SNX6-204ENST00000555541 PRKCQQ04759 706 aa7.82□□□□□ -1.16
SNX6-204ENST00000555541 SPRED3Q2MJR0 410 aa7.82□□□□□ -1.16
SNX6-204ENST00000555541 GALNT12Q8IXK2 581 aa7.82□□□□□ -1.16
SNX6-204ENST00000555541 FAM181AQ8N9Y4 354 aa7.82□□□□□ -1.16
SNX6-204ENST00000555541 FAM84AQ96KN4 292 aa7.82□□□□□ -1.16
SNX6-204ENST00000555541 ANO2Q9NQ90 1003 aa7.82□□□□□ -1.16
SNX6-204ENST00000555541 PPP1R9AQ9ULJ8 1098 aa7.82□□□□□ -1.16
SNX6-204ENST00000555541 A0A096LPE4 126 aa7.81□□□□□ -1.16
SNX6-204ENST00000555541 A0A1W2PPZ6 126 aa7.81□□□□□ -1.16
SNX6-204ENST00000555541 CFPP27918 469 aa7.81□□□□□ -1.16
SNX6-204ENST00000555541 AAMPQ13685 434 aa7.81□□□□□ -1.16
SNX6-204ENST00000555541 LCNL1Q6ZST4 164 aa7.81□□□□□ -1.16
SNX6-204ENST00000555541 FLAD1Q8NFF5 587 aa7.81□□□□□ -1.16
SNX6-204ENST00000555541 WDR18Q9BV38 432 aa7.81□□□□□ -1.16
SNX6-204ENST00000555541 DAGLAQ9Y4D2 1042 aa7.81□□□□□ -1.16
SNX6-204ENST00000555541 ZNF503-AS2A6NEH8 195 aa7.8□□□□□ -1.16
SNX6-204ENST00000555541 AOC2O75106 756 aa7.8□□□□□ -1.16
SNX6-204ENST00000555541 ZNF211Q13398 564 aaPredicted RBP7.8□□□□□ -1.16
SNX6-204ENST00000555541 CYP27C1Q4G0S4 372 aa7.8□□□□□ -1.16
SNX6-204ENST00000555541 USPL1Q5W0Q7 1092 aa7.8□□□□□ -1.16
SNX6-204ENST00000555541 AP4E1Q9UPM8 1137 aa7.8□□□□□ -1.16
SNX6-204ENST00000555541 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.79□□□□□ -1.16
SNX6-204ENST00000555541 B3GALT4O96024 378 aa7.79□□□□□ -1.16
SNX6-204ENST00000555541 HP1BP3Q5SSJ5 553 aaPredicted RBP7.79□□□□□ -1.16
SNX6-204ENST00000555541 LGR6Q9HBX8 967 aa7.79□□□□□ -1.16
SNX6-204ENST00000555541 CRIM1Q9NZV1 1036 aa7.79□□□□□ -1.16
SNX6-204ENST00000555541 PLAGL2Q9UPG8 496 aa7.79□□□□□ -1.16
SNX6-204ENST00000555541 FAM87AP0C7U9 286 aa7.78□□□□□ -1.16
SNX6-204ENST00000555541 CDK5R2Q13319 367 aa7.78□□□□□ -1.16
SNX6-204ENST00000555541 KIAA0319Q5VV43 1072 aa7.78□□□□□ -1.16
SNX6-204ENST00000555541 PI4K2BQ8TCG2 481 aa7.78□□□□□ -1.16
SNX6-204ENST00000555541 SLC38A3Q99624 504 aa7.78□□□□□ -1.16
SNX6-204ENST00000555541 MKNK2Q9HBH9 465 aa7.78□□□□□ -1.16
SNX6-204ENST00000555541 NCANO14594 1321 aa7.78□□□□□ -1.16
SNX6-204ENST00000555541 ICMTO60725 284 aa7.77□□□□□ -1.17
SNX6-204ENST00000555541 ABL1P00519 1130 aa7.77□□□□□ -1.17
SNX6-204ENST00000555541 OXCT1P55809 520 aa7.77□□□□□ -1.17
SNX6-204ENST00000555541 LIN7BQ9HAP6 207 aa7.77□□□□□ -1.17
SNX6-204ENST00000555541 RAD18Q9NS91 495 aa7.77□□□□□ -1.17
SNX6-204ENST00000555541 TMPRSS2O15393 492 aa7.76□□□□□ -1.17
SNX6-204ENST00000555541 TSPAN15O95858 294 aa7.76□□□□□ -1.17
SNX6-204ENST00000555541 IGHA2P01877 340 aa7.76□□□□□ -1.17
SNX6-204ENST00000555541 ZFYVE1Q9HBF4 777 aa7.76□□□□□ -1.17
SNX6-204ENST00000555541 EGFL7Q9UHF1 273 aa7.76□□□□□ -1.17
SNX6-204ENST00000555541 LRRC10BA6NIK2 292 aa7.75□□□□□ -1.17
SNX6-204ENST00000555541 KRT1P04264 644 aa7.75□□□□□ -1.17
SNX6-204ENST00000555541 ARHGAP4P98171 946 aa7.75□□□□□ -1.17
SNX6-204ENST00000555541 IFI16Q16666 785 aaKnown RBP7.75□□□□□ -1.17
SNX6-204ENST00000555541 LILRA6Q6PI73 481 aa7.75□□□□□ -1.17
SNX6-204ENST00000555541 SLC23A3Q6PIS1 610 aa7.75□□□□□ -1.17
SNX6-204ENST00000555541 TNKS2Q9H2K2 1166 aa7.75□□□□□ -1.17
SNX6-204ENST00000555541 MTMR7Q9Y216 660 aa7.75□□□□□ -1.17
SNX6-204ENST00000555541 PRRG2O14669 202 aa7.74□□□□□ -1.17
SNX6-204ENST00000555541 LEFTY1O75610 366 aa7.74□□□□□ -1.17
SNX6-204ENST00000555541 ITPKAP23677 461 aa7.74□□□□□ -1.17
SNX6-204ENST00000555541 AOC3Q16853 763 aa7.74□□□□□ -1.17
SNX6-204ENST00000555541 ZSWIM9Q86XI8 627 aa7.74□□□□□ -1.17
SNX6-204ENST00000555541 WDR89Q96FK6 387 aaPredicted RBP7.74□□□□□ -1.17
SNX6-204ENST00000555541 CORO1BQ9BR76 489 aa7.74□□□□□ -1.17
SNX6-204ENST00000555541 ZNF576Q9H609 170 aa7.74□□□□□ -1.17
SNX6-204ENST00000555541 PCDHGC5Q9Y5F6 944 aa7.74□□□□□ -1.17
SNX6-204ENST00000555541 GTF3C3Q9Y5Q9 886 aa7.74□□□□□ -1.17
SNX6-204ENST00000555541 SIAH1Q8IUQ4 282 aa7.73□□□□□ -1.17
SNX6-204ENST00000555541 TOX2Q96NM4 488 aa7.73□□□□□ -1.17
SNX6-204ENST00000555541 FAM129BQ96TA1 746 aa7.73□□□□□ -1.17
SNX6-204ENST00000555541 CEACAM5P06731 702 aa7.72□□□□□ -1.17
SNX6-204ENST00000555541 SERPINB4P48594 390 aa7.72□□□□□ -1.17
SNX6-204ENST00000555541 ORC1Q13415 861 aa7.72□□□□□ -1.17
SNX6-204ENST00000555541 FAM214BQ7L5A3 538 aa7.72□□□□□ -1.17
SNX6-204ENST00000555541 HRASLS5Q96KN8 279 aa7.72□□□□□ -1.17
SNX6-204ENST00000555541 FANCD2OSQ96PS1 177 aa7.72□□□□□ -1.17
SNX6-204ENST00000555541 DUSP23Q9BVJ7 150 aa7.72□□□□□ -1.17
SNX6-204ENST00000555541 DISC1Q9NRI5 854 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms