RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ZAP70P43403 619 aa16.79■□□□□ 0.28
SNX6-203ENST00000555416 MAP2K1Q02750 393 aaPredicted RBP16.79■□□□□ 0.28
SNX6-203ENST00000555416 NOGQ13253 232 aa16.79■□□□□ 0.28
SNX6-203ENST00000555416 TNFAIP1Q13829 316 aa16.79■□□□□ 0.28
SNX6-203ENST00000555416 CCDC158Q5M9N0 1113 aa16.79■□□□□ 0.28
SNX6-203ENST00000555416 COL13A1Q5TAT6 717 aaPredicted RBP16.79■□□□□ 0.28
SNX6-203ENST00000555416 ARMC9Q7Z3E5 817 aa16.79■□□□□ 0.28
SNX6-203ENST00000555416 DZIP1Q86YF9 867 aaKnown RBP16.79■□□□□ 0.28
SNX6-203ENST00000555416 ERC1Q8IUD2 1116 aa16.79■□□□□ 0.28
SNX6-203ENST00000555416 ZFPM1Q8IX07 1006 aa16.79■□□□□ 0.28
SNX6-203ENST00000555416 CCDC102AQ96A19 550 aa16.79■□□□□ 0.28
SNX6-203ENST00000555416 BCL11AQ9H165 835 aa16.79■□□□□ 0.28
SNX6-203ENST00000555416 CHMP4BQ9H444 224 aaKnown RBP16.79■□□□□ 0.28
SNX6-203ENST00000555416 TSKSQ9UJT2 592 aa16.79■□□□□ 0.28
SNX6-203ENST00000555416 MYO5AQ9Y4I1 1855 aaKnown RBP16.78■□□□□ 0.28
SNX6-203ENST00000555416 MKRN3Q13064 507 aaKnown RBP16.78■□□□□ 0.28
SNX6-203ENST00000555416 MAP3K11Q16584 847 aa16.78■□□□□ 0.28
SNX6-203ENST00000555416 SUPT20HL1Q3ZLR7 823 aa16.78■□□□□ 0.28
SNX6-203ENST00000555416 HSP90AB4PQ58FF6 505 aa16.78■□□□□ 0.28
SNX6-203ENST00000555416 ERICH6Q7L0X2 663 aa16.78■□□□□ 0.28
SNX6-203ENST00000555416 NSUN4Q96CB9 384 aaKnown RBP16.78■□□□□ 0.28
SNX6-203ENST00000555416 ZNF512BQ96KM6 892 aaPredicted RBP16.78■□□□□ 0.28
SNX6-203ENST00000555416 CRBNQ96SW2 442 aa16.78■□□□□ 0.28
SNX6-203ENST00000555416 PIH1D3Q9NQM4 214 aaKnown RBP16.78■□□□□ 0.28
SNX6-203ENST00000555416 USP40Q9NVE5 1235 aa16.78■□□□□ 0.28
SNX6-203ENST00000555416 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.78■□□□□ 0.28
SNX6-203ENST00000555416 FAM198AQ9UFP1 575 aa16.78■□□□□ 0.28
SNX6-203ENST00000555416 PCDHB15Q9Y5E8 787 aa16.78■□□□□ 0.28
SNX6-203ENST00000555416 MROH7-TTC4A0A0A0MT08 1334 aa16.77■□□□□ 0.28
SNX6-203ENST00000555416 HSPA8P11142 646 aaKnown RBP16.77■□□□□ 0.28
SNX6-203ENST00000555416 TCP10Q12799 353 aa16.77■□□□□ 0.28
SNX6-203ENST00000555416 FKBP1CQ5VVH2 108 aa16.77■□□□□ 0.28
SNX6-203ENST00000555416 SPTY2D1Q68D10 685 aaPredicted RBP16.77■□□□□ 0.28
SNX6-203ENST00000555416 KIF1BPQ96EK5 621 aa16.77■□□□□ 0.28
SNX6-203ENST00000555416 FAM163AQ96GL9 167 aaPredicted RBP16.77■□□□□ 0.28
SNX6-203ENST00000555416 OTOFQ9HC10 1997 aa16.77■□□□□ 0.27
SNX6-203ENST00000555416 PPP1R12BO60237 982 aaPredicted RBP16.76■□□□□ 0.27
SNX6-203ENST00000555416 BTDP43251 543 aa16.76■□□□□ 0.27
SNX6-203ENST00000555416 TNNI2P48788 182 aa16.76■□□□□ 0.27
SNX6-203ENST00000555416 LBX1P52954 281 aa16.76■□□□□ 0.27
SNX6-203ENST00000555416 RHBDL3P58872 404 aa16.76■□□□□ 0.27
SNX6-203ENST00000555416 FAM83AQ86UY5 434 aa16.76■□□□□ 0.27
SNX6-203ENST00000555416 AIDAQ96BJ3 306 aa16.76■□□□□ 0.27
SNX6-203ENST00000555416 CSRNP1Q96S65 589 aa16.76■□□□□ 0.27
SNX6-203ENST00000555416 DDX4Q9NQI0 724 aaKnown RBP16.76■□□□□ 0.27
SNX6-203ENST00000555416 TMOD2Q9NZR1 351 aa16.76■□□□□ 0.27
SNX6-203ENST00000555416 RAI14Q9P0K7 980 aa16.76■□□□□ 0.27
SNX6-203ENST00000555416 RFX7Q2KHR2 1363 aa16.76■□□□□ 0.27
SNX6-203ENST00000555416 GPR75-ASB3A0A0A6YYF3 556 aa16.75■□□□□ 0.27
SNX6-203ENST00000555416 SMARCA5O60264 1052 aaPredicted RBP16.75■□□□□ 0.27
SNX6-203ENST00000555416 RAB11FIP3O75154 756 aa16.75■□□□□ 0.27
SNX6-203ENST00000555416 ADGRA1Q86SQ6 560 aa16.75■□□□□ 0.27
SNX6-203ENST00000555416 ANTXR1Q9H6X2 564 aa16.75■□□□□ 0.27
SNX6-203ENST00000555416 LRP2BPQ9P2M1 347 aa16.75■□□□□ 0.27
SNX6-203ENST00000555416 WDHD1O75717 1129 aaPredicted RBP16.74■□□□□ 0.27
SNX6-203ENST00000555416 SLURP2P0DP57 97 aa16.74■□□□□ 0.27
SNX6-203ENST00000555416 GJA5P36382 358 aa16.74■□□□□ 0.27
SNX6-203ENST00000555416 CTCFP49711 727 aaPredicted RBP16.74■□□□□ 0.27
SNX6-203ENST00000555416 SPRYD7Q5W111 196 aa16.74■□□□□ 0.27
SNX6-203ENST00000555416 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.74■□□□□ 0.27
SNX6-203ENST00000555416 SH3BP5LQ7L8J4 393 aa16.74■□□□□ 0.27
SNX6-203ENST00000555416 CLASRPQ8N2M8 674 aaKnown RBP16.74■□□□□ 0.27
SNX6-203ENST00000555416 FAM151AQ8WW52 585 aa16.74■□□□□ 0.27
SNX6-203ENST00000555416 IREB2P48200 963 aaKnown RBP16.73■□□□□ 0.27
SNX6-203ENST00000555416 RGS3P49796 1198 aa16.73■□□□□ 0.27
SNX6-203ENST00000555416 MIGA2Q7L4E1 593 aa16.73■□□□□ 0.27
SNX6-203ENST00000555416 CNKSR2Q8WXI2 1034 aa16.73■□□□□ 0.27
SNX6-203ENST00000555416 SLC10A4Q96EP9 437 aa16.73■□□□□ 0.27
SNX6-203ENST00000555416 IDI2Q9BXS1 227 aa16.73■□□□□ 0.27
SNX6-203ENST00000555416 DCTPP1Q9H773 170 aa16.73■□□□□ 0.27
SNX6-203ENST00000555416 RPAP1Q9BWH6 1393 aaPredicted RBP16.73■□□□□ 0.27
SNX6-203ENST00000555416 SLF2Q8IX21 1173 aa16.72■□□□□ 0.27
SNX6-203ENST00000555416 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.72■□□□□ 0.27
SNX6-203ENST00000555416 WNK4Q96J92 1243 aa16.72■□□□□ 0.27
SNX6-203ENST00000555416 DDTLA6NHG4 134 aaPredicted RBP16.71■□□□□ 0.27
SNX6-203ENST00000555416 IFIT2P09913 472 aaKnown RBP16.71■□□□□ 0.27
SNX6-203ENST00000555416 GSTO1P78417 241 aa16.71■□□□□ 0.27
SNX6-203ENST00000555416 PICALMQ13492 652 aa16.71■□□□□ 0.27
SNX6-203ENST00000555416 VGLL4Q14135 290 aa16.71■□□□□ 0.27
SNX6-203ENST00000555416 EDC3Q96F86 508 aaKnown RBP16.71■□□□□ 0.27
SNX6-203ENST00000555416 BEGAINQ9BUH8 593 aa16.71■□□□□ 0.27
SNX6-203ENST00000555416 LRRCC1Q9C099 1032 aa16.71■□□□□ 0.27
SNX6-203ENST00000555416 ELP3Q9H9T3 547 aa16.71■□□□□ 0.27
SNX6-203ENST00000555416 RNF186Q9NXI6 227 aa16.71■□□□□ 0.27
SNX6-203ENST00000555416 ATRNL1Q5VV63 1379 aa16.71■□□□□ 0.27
SNX6-203ENST00000555416 MAST2Q6P0Q8 1798 aa16.71■□□□□ 0.27
SNX6-203ENST00000555416 IDH1O75874 414 aaKnown RBP16.7■□□□□ 0.26
SNX6-203ENST00000555416 LDHCP07864 332 aa16.7■□□□□ 0.26
SNX6-203ENST00000555416 MAP3K9P80192 1104 aa16.7■□□□□ 0.26
SNX6-203ENST00000555416 NAA16Q6N069 864 aaPredicted RBP16.7■□□□□ 0.26
SNX6-203ENST00000555416 ANKRD13AQ8IZ07 590 aa16.7■□□□□ 0.26
SNX6-203ENST00000555416 SH3RF3Q8TEJ3 882 aaPredicted RBP16.7■□□□□ 0.26
SNX6-203ENST00000555416 ZKSCAN4Q969J2 545 aaPredicted RBP16.7■□□□□ 0.26
SNX6-203ENST00000555416 DOCK2Q92608 1830 aa16.69■□□□□ 0.26
SNX6-203ENST00000555416 ENTPD3O75355 529 aa16.69■□□□□ 0.26
SNX6-203ENST00000555416 TRPA1O75762 1119 aa16.69■□□□□ 0.26
SNX6-203ENST00000555416 INPP5BP32019 993 aa16.69■□□□□ 0.26
SNX6-203ENST00000555416 DYNLL1P63167 89 aaKnown RBP16.69■□□□□ 0.26
SNX6-203ENST00000555416 WRNIP1Q96S55 665 aa16.69■□□□□ 0.26
SNX6-203ENST00000555416 PRDM10Q9NQV6 1147 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms