RNA–Protein interactions for RNA: ENST00000555381.5

ATXN3-232, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-232ENST00000555381 SMIM5Q71RC9 77 aa6.78□□□□□ -1.32
ATXN3-232ENST00000555381 CD163Q86VB7 1156 aa6.78□□□□□ -1.32
ATXN3-232ENST00000555381 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
ATXN3-232ENST00000555381 TPCN2Q8NHX9 752 aa6.78□□□□□ -1.32
ATXN3-232ENST00000555381 PIGBQ92521 554 aa6.78□□□□□ -1.32
ATXN3-232ENST00000555381 IQSEC3Q9UPP2 1182 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-232ENST00000555381 KDM2BQ8NHM5 1336 aa6.77□□□□□ -1.32
ATXN3-232ENST00000555381 PCDH11XQ9BZA7 1347 aa6.77□□□□□ -1.32
ATXN3-232ENST00000555381 PCDH11YQ9BZA8 1340 aa6.77□□□□□ -1.32
ATXN3-232ENST00000555381 A6NJY4 79 aa6.77□□□□□ -1.33
ATXN3-232ENST00000555381 CYP27B1O15528 508 aa6.77□□□□□ -1.33
ATXN3-232ENST00000555381 BNIP3LO60238 219 aa6.77□□□□□ -1.33
ATXN3-232ENST00000555381 DPEP1P16444 411 aa6.77□□□□□ -1.33
ATXN3-232ENST00000555381 HOXB4P17483 251 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-232ENST00000555381 RASA1P20936 1047 aa6.77□□□□□ -1.33
ATXN3-232ENST00000555381 EPHA4P54764 986 aa6.77□□□□□ -1.33
ATXN3-232ENST00000555381 TMF1P82094 1093 aa6.77□□□□□ -1.33
ATXN3-232ENST00000555381 PTK7Q13308 1070 aa6.77□□□□□ -1.33
ATXN3-232ENST00000555381 DOC2BQ14184 412 aa6.77□□□□□ -1.33
ATXN3-232ENST00000555381 CRTC2Q53ET0 693 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-232ENST00000555381 TRAPPC3LQ5T215 181 aa6.77□□□□□ -1.33
ATXN3-232ENST00000555381 SIX5Q8N196 739 aa6.77□□□□□ -1.33
ATXN3-232ENST00000555381 USHBP1Q8N6Y0 703 aa6.77□□□□□ -1.33
ATXN3-232ENST00000555381 LINC00116Q8NCU8 138 aa6.77□□□□□ -1.33
ATXN3-232ENST00000555381 SMC1BQ8NDV3 1235 aa6.77□□□□□ -1.33
ATXN3-232ENST00000555381 RHBDD1Q8TEB9 315 aa6.77□□□□□ -1.33
ATXN3-232ENST00000555381 BTBD6Q96KE9 485 aa6.77□□□□□ -1.33
ATXN3-232ENST00000555381 CCDC87Q9NVE4 849 aa6.77□□□□□ -1.33
ATXN3-232ENST00000555381 QSER1Q2KHR3 1735 aa6.76□□□□□ -1.33
ATXN3-232ENST00000555381 WNK3Q9BYP7 1800 aa6.76□□□□□ -1.33
ATXN3-232ENST00000555381 CDK2AP1O14519 115 aa6.76□□□□□ -1.33
ATXN3-232ENST00000555381 BACH1O14867 736 aa6.76□□□□□ -1.33
ATXN3-232ENST00000555381 RFX1P22670 979 aa6.76□□□□□ -1.33
ATXN3-232ENST00000555381 CHRNA4P43681 627 aa6.76□□□□□ -1.33
ATXN3-232ENST00000555381 PLA2G4AP47712 749 aa6.76□□□□□ -1.33
ATXN3-232ENST00000555381 ZNF594Q96JF6 807 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-232ENST00000555381 CARD11Q9BXL7 1154 aa6.76□□□□□ -1.33
ATXN3-232ENST00000555381 VRTNQ9H8Y1 702 aa6.76□□□□□ -1.33
ATXN3-232ENST00000555381 NDFIP2Q9NV92 336 aa6.76□□□□□ -1.33
ATXN3-232ENST00000555381 PIM2Q9P1W9 311 aa6.76□□□□□ -1.33
ATXN3-232ENST00000555381 CD163L1Q9NR16 1453 aa6.76□□□□□ -1.33
ATXN3-232ENST00000555381 QRICH2Q9H0J4 1663 aa6.76□□□□□ -1.33
ATXN3-232ENST00000555381 MEGF6O75095 1541 aa6.76□□□□□ -1.33
ATXN3-232ENST00000555381 A0A1W2PP64 1363 aa6.75□□□□□ -1.33
ATXN3-232ENST00000555381 SFI1A8K8P3 1242 aa6.75□□□□□ -1.33
ATXN3-232ENST00000555381 NEURL1BA8MQ27 555 aa6.75□□□□□ -1.33
ATXN3-232ENST00000555381 EPXP11678 715 aa6.75□□□□□ -1.33
ATXN3-232ENST00000555381 KCNA3P22001 575 aa6.75□□□□□ -1.33
ATXN3-232ENST00000555381 ITPK1Q13572 414 aa6.75□□□□□ -1.33
ATXN3-232ENST00000555381 RRS1Q15050 365 aaKnown RBP6.75□□□□□ -1.33
ATXN3-232ENST00000555381 CDCA8Q53HL2 280 aa6.75□□□□□ -1.33
ATXN3-232ENST00000555381 HSP90AB2PQ58FF8 381 aa6.75□□□□□ -1.33
ATXN3-232ENST00000555381 DALRD3Q5D0E6 543 aaKnown RBP6.75□□□□□ -1.33
ATXN3-232ENST00000555381 SIN3AQ96ST3 1273 aa6.75□□□□□ -1.33
ATXN3-232ENST00000555381 TMOD3Q9NYL9 352 aa6.75□□□□□ -1.33
ATXN3-232ENST00000555381 SCHIP1Q9P0W5 487 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-232ENST00000555381 TIMELESSQ9UNS1 1208 aa6.75□□□□□ -1.33
ATXN3-232ENST00000555381 SPG7Q9UQ90 795 aa6.75□□□□□ -1.33
ATXN3-232ENST00000555381 RTCBQ9Y3I0 505 aaKnown RBP6.75□□□□□ -1.33
ATXN3-232ENST00000555381 PARP3Q9Y6F1 533 aa6.75□□□□□ -1.33
ATXN3-232ENST00000555381 RGPD5Q99666 1765 aa6.74□□□□□ -1.33
ATXN3-232ENST00000555381 PLEKHG2Q9H7P9 1386 aa6.74□□□□□ -1.33
ATXN3-232ENST00000555381 FAM196BA6NMK8 535 aa6.74□□□□□ -1.33
ATXN3-232ENST00000555381 FYB1O15117 783 aa6.74□□□□□ -1.33
ATXN3-232ENST00000555381 HSPA1AP0DMV8 641 aaKnown RBP6.74□□□□□ -1.33
ATXN3-232ENST00000555381 HSPA1BP0DMV9 641 aaKnown RBP6.74□□□□□ -1.33
ATXN3-232ENST00000555381 ARAFP10398 606 aa6.74□□□□□ -1.33
ATXN3-232ENST00000555381 RFC4P35249 363 aa6.74□□□□□ -1.33
ATXN3-232ENST00000555381 DGKGP49619 791 aa6.74□□□□□ -1.33
ATXN3-232ENST00000555381 NEUROD1Q13562 356 aa6.74□□□□□ -1.33
ATXN3-232ENST00000555381 FIGNL1Q6PIW4 674 aa6.74□□□□□ -1.33
ATXN3-232ENST00000555381 KRTAP4-7Q9BYR0 210 aa6.74□□□□□ -1.33
ATXN3-232ENST00000555381 CRISPLD1Q9H336 500 aa6.74□□□□□ -1.33
ATXN3-232ENST00000555381 NOP53Q9NZM5 478 aaKnown RBP6.74□□□□□ -1.33
ATXN3-232ENST00000555381 RNF181Q9P0P0 153 aa6.74□□□□□ -1.33
ATXN3-232ENST00000555381 ASAP1Q9ULH1 1129 aa6.74□□□□□ -1.33
ATXN3-232ENST00000555381 SMG6Q86US8 1419 aaKnown RBP6.74□□□□□ -1.33
ATXN3-232ENST00000555381 KAT6BQ8WYB5 2073 aa6.73□□□□□ -1.33
ATXN3-232ENST00000555381 PXDNLA1KZ92 1463 aa6.73□□□□□ -1.33
ATXN3-232ENST00000555381 RTL1A6NKG5 1358 aa6.73□□□□□ -1.33
ATXN3-232ENST00000555381 USP17L15C9J2P7 530 aa6.73□□□□□ -1.33
ATXN3-232ENST00000555381 USP17L10C9JJH3 530 aa6.73□□□□□ -1.33
ATXN3-232ENST00000555381 USP17L13C9JLJ4 530 aa6.73□□□□□ -1.33
ATXN3-232ENST00000555381 USP17L12C9JPN9 530 aa6.73□□□□□ -1.33
ATXN3-232ENST00000555381 USP17L11C9JVI0 530 aa6.73□□□□□ -1.33
ATXN3-232ENST00000555381 USP17L21D6R901 530 aa6.73□□□□□ -1.33
ATXN3-232ENST00000555381 USP17L18D6R9N7 530 aa6.73□□□□□ -1.33
ATXN3-232ENST00000555381 USP17L22D6RA61 530 aa6.73□□□□□ -1.33
ATXN3-232ENST00000555381 USP17L17D6RBQ6 530 aa6.73□□□□□ -1.33
ATXN3-232ENST00000555381 USP17L19D6RCP7 530 aa6.73□□□□□ -1.33
ATXN3-232ENST00000555381 USP17L20D6RJB6 530 aa6.73□□□□□ -1.33
ATXN3-232ENST00000555381 M0R2N6 131 aa6.73□□□□□ -1.33
ATXN3-232ENST00000555381 GYS1P13807 737 aa6.73□□□□□ -1.33
ATXN3-232ENST00000555381 VEGFAP15692 232 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-232ENST00000555381 USP17L24Q0WX57 530 aa6.73□□□□□ -1.33
ATXN3-232ENST00000555381 FOXD4L6Q3SYB3 417 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-232ENST00000555381 TBCELQ5QJ74 424 aa6.73□□□□□ -1.33
ATXN3-232ENST00000555381 FOXD4L3Q6VB84 417 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-232ENST00000555381 TSEN2Q8NCE0 465 aaKnown RBP6.73□□□□□ -1.33
ATXN3-232ENST00000555381 ZCCHC2Q9C0B9 1178 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms