RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 CMTR1Q8N1G2 835 aaKnown RBP17.33■□□□□ 0.36
XRCC3-211ENST00000555055 SCAND2PQ9GZW5 306 aaPredicted RBP17.33■□□□□ 0.36
XRCC3-211ENST00000555055 ORC3Q9UBD5 711 aaPredicted RBP17.33■□□□□ 0.36
XRCC3-211ENST00000555055 SLC4A4Q9Y6R1 1079 aa17.33■□□□□ 0.36
XRCC3-211ENST00000555055 GSG1L2A8MUP6 293 aa17.32■□□□□ 0.36
XRCC3-211ENST00000555055 ZSCAN20P17040 1043 aaPredicted RBP17.32■□□□□ 0.36
XRCC3-211ENST00000555055 CDC27P30260 824 aa17.32■□□□□ 0.36
XRCC3-211ENST00000555055 LLPHQ9BRT6 129 aaKnown RBP17.32■□□□□ 0.36
XRCC3-211ENST00000555055 FUCA2Q9BTY2 467 aa17.32■□□□□ 0.36
XRCC3-211ENST00000555055 RAI14Q9P0K7 980 aa17.32■□□□□ 0.36
XRCC3-211ENST00000555055 CYP2D7A0A087X1C5 515 aa17.32■□□□□ 0.36
XRCC3-211ENST00000555055 NPHP1O15259 732 aa17.32■□□□□ 0.36
XRCC3-211ENST00000555055 AP5Z1O43299 807 aa17.32■□□□□ 0.36
XRCC3-211ENST00000555055 TDO2P48775 406 aa17.32■□□□□ 0.36
XRCC3-211ENST00000555055 FBXW7Q969H0 707 aa17.32■□□□□ 0.36
XRCC3-211ENST00000555055 NUP62CLQ9H1M0 184 aa17.32■□□□□ 0.36
XRCC3-211ENST00000555055 MINPP1Q9UNW1 487 aa17.32■□□□□ 0.36
XRCC3-211ENST00000555055 LRP5O75197 1615 aa17.31■□□□□ 0.36
XRCC3-211ENST00000555055 NBPF5PQ86XG9 351 aaPredicted RBP17.31■□□□□ 0.36
XRCC3-211ENST00000555055 AK7Q96M32 723 aa17.31■□□□□ 0.36
XRCC3-211ENST00000555055 ZSWIM5Q9P217 1185 aa17.31■□□□□ 0.36
XRCC3-211ENST00000555055 MINDY4BA8MYZ0 360 aa17.31■□□□□ 0.36
XRCC3-211ENST00000555055 CYP7A1P22680 504 aa17.31■□□□□ 0.36
XRCC3-211ENST00000555055 DYNLL1P63167 89 aaKnown RBP17.31■□□□□ 0.36
XRCC3-211ENST00000555055 NFXL1Q6ZNB6 911 aa17.31■□□□□ 0.36
XRCC3-211ENST00000555055 VPS37DQ86XT2 251 aa17.31■□□□□ 0.36
XRCC3-211ENST00000555055 CDC5LQ99459 802 aaKnown RBP17.31■□□□□ 0.36
XRCC3-211ENST00000555055 KIF28PB7ZC32 967 aa17.3■□□□□ 0.36
XRCC3-211ENST00000555055 TNMDQ9H2S6 317 aa17.3■□□□□ 0.36
XRCC3-211ENST00000555055 GOLPH3LQ9H4A5 285 aa17.3■□□□□ 0.36
XRCC3-211ENST00000555055 COL1A1P02452 1464 aaPredicted RBP17.3■□□□□ 0.36
XRCC3-211ENST00000555055 ELP1O95163 1332 aa17.3■□□□□ 0.36
XRCC3-211ENST00000555055 PATL2C9JE40 543 aaKnown RBP17.3■□□□□ 0.36
XRCC3-211ENST00000555055 ARHGEF1Q92888 912 aaKnown RBP17.3■□□□□ 0.36
XRCC3-211ENST00000555055 C8orf76Q96K31 380 aa17.3■□□□□ 0.36
XRCC3-211ENST00000555055 SETDB2Q96T68 719 aa17.3■□□□□ 0.36
XRCC3-211ENST00000555055 ANGEL1Q9UNK9 670 aaKnown RBP17.3■□□□□ 0.36
XRCC3-211ENST00000555055 ZPR1O75312 459 aa17.29■□□□□ 0.36
XRCC3-211ENST00000555055 TXNRD3Q86VQ6 643 aa17.29■□□□□ 0.36
XRCC3-211ENST00000555055 GPR101Q96P66 508 aaPredicted RBP17.29■□□□□ 0.36
XRCC3-211ENST00000555055 SH2B2O14492 632 aaPredicted RBP17.29■□□□□ 0.36
XRCC3-211ENST00000555055 METAP2P50579 478 aaKnown RBP eCLIP17.29■□□□□ 0.36
XRCC3-211ENST00000555055 CHAF1AQ13111 956 aaPredicted RBP17.29■□□□□ 0.36
XRCC3-211ENST00000555055 TMEM67Q5HYA8 995 aa17.29■□□□□ 0.36
XRCC3-211ENST00000555055 LUZP1Q86V48 1076 aa17.29■□□□□ 0.36
XRCC3-211ENST00000555055 KIAA1524Q8TCG1 905 aa17.29■□□□□ 0.36
XRCC3-211ENST00000555055 ZSCAN16Q9H4T2 348 aaPredicted RBP17.29■□□□□ 0.36
XRCC3-211ENST00000555055 CLIC4Q9Y696 253 aa17.29■□□□□ 0.36
XRCC3-211ENST00000555055 A0A0U1RQG5 324 aaPredicted RBP17.28■□□□□ 0.36
XRCC3-211ENST00000555055 PRDM1O75626 825 aa17.28■□□□□ 0.36
XRCC3-211ENST00000555055 KIF20AO95235 890 aa17.28■□□□□ 0.36
XRCC3-211ENST00000555055 ME1P48163 572 aa17.28■□□□□ 0.36
XRCC3-211ENST00000555055 MAP3K11Q16584 847 aa17.28■□□□□ 0.36
XRCC3-211ENST00000555055 MEX3CQ5U5Q3 659 aaKnown RBP17.28■□□□□ 0.36
XRCC3-211ENST00000555055 NAA16Q6N069 864 aaPredicted RBP17.28■□□□□ 0.36
XRCC3-211ENST00000555055 APOA5Q6Q788 366 aa17.28■□□□□ 0.36
XRCC3-211ENST00000555055 CLEC4GQ6UXB4 293 aa17.28■□□□□ 0.36
XRCC3-211ENST00000555055 ATRNO75882 1429 aa17.28■□□□□ 0.36
XRCC3-211ENST00000555055 EVCP57679 992 aa17.28■□□□□ 0.36
XRCC3-211ENST00000555055 ZNF384Q8TF68 577 aa17.28■□□□□ 0.36
XRCC3-211ENST00000555055 FAM84BQ96KN1 310 aaPredicted RBP17.28■□□□□ 0.36
XRCC3-211ENST00000555055 IFIT3O14879 490 aaKnown RBP17.27■□□□□ 0.36
XRCC3-211ENST00000555055 PDIA4P13667 645 aaKnown RBP17.27■□□□□ 0.36
XRCC3-211ENST00000555055 IGDCC4Q8TDY8 1250 aa17.27■□□□□ 0.36
XRCC3-211ENST00000555055 CHMP4CQ96CF2 233 aa17.27■□□□□ 0.36
XRCC3-211ENST00000555055 MRVI1Q9Y6F6 885 aa17.27■□□□□ 0.36
XRCC3-211ENST00000555055 COL5A3P25940 1745 aaPredicted RBP17.27■□□□□ 0.36
XRCC3-211ENST00000555055 TYRO3Q06418 890 aa17.27■□□□□ 0.35
XRCC3-211ENST00000555055 TICAM2Q86XR7 235 aa17.27■□□□□ 0.35
XRCC3-211ENST00000555055 CCAR1Q8IX12 1150 aaKnown RBP17.27■□□□□ 0.35
XRCC3-211ENST00000555055 LY9Q9HBG7 655 aa17.27■□□□□ 0.35
XRCC3-211ENST00000555055 CFAP45Q9UL16 551 aa17.27■□□□□ 0.35
XRCC3-211ENST00000555055 UTRNP46939 3433 aa17.27■□□□□ 0.35
XRCC3-211ENST00000555055 GOLGA6L6A8MZA4 724 aa17.26■□□□□ 0.35
XRCC3-211ENST00000555055 SYCP1Q15431 976 aa17.26■□□□□ 0.35
XRCC3-211ENST00000555055 FNBP4Q8N3X1 1017 aaPredicted RBP17.26■□□□□ 0.35
XRCC3-211ENST00000555055 ANKRD7Q92527 254 aa17.26■□□□□ 0.35
XRCC3-211ENST00000555055 TTC12Q9H892 705 aaPredicted RBP17.26■□□□□ 0.35
XRCC3-211ENST00000555055 BSDC1Q9NW68 430 aaPredicted RBP17.26■□□□□ 0.35
XRCC3-211ENST00000555055 NARFQ9UHQ1 456 aa17.26■□□□□ 0.35
XRCC3-211ENST00000555055 RTCBQ9Y3I0 505 aaKnown RBP17.26■□□□□ 0.35
XRCC3-211ENST00000555055 CTIFO43310 598 aaKnown RBP17.26■□□□□ 0.35
XRCC3-211ENST00000555055 RANBP6O60518 1105 aaKnown RBP17.26■□□□□ 0.35
XRCC3-211ENST00000555055 SF3B3Q15393 1217 aaKnown RBP17.26■□□□□ 0.35
XRCC3-211ENST00000555055 ANO6Q4KMQ2 910 aa17.26■□□□□ 0.35
XRCC3-211ENST00000555055 RPS6KA4O75676 772 aa17.25■□□□□ 0.35
XRCC3-211ENST00000555055 CCDC192P0DO97 292 aa17.25■□□□□ 0.35
XRCC3-211ENST00000555055 RPS8P62241 208 aaKnown RBP17.25■□□□□ 0.35
XRCC3-211ENST00000555055 FAM196AQ6ZSG2 479 aa17.25■□□□□ 0.35
XRCC3-211ENST00000555055 MFSD6Q6ZSS7 791 aa17.25■□□□□ 0.35
XRCC3-211ENST00000555055 SPC24Q8NBT2 197 aa17.25■□□□□ 0.35
XRCC3-211ENST00000555055 FBXO18Q8NFZ0 1043 aa17.25■□□□□ 0.35
XRCC3-211ENST00000555055 NLRP3Q96P20 1036 aa17.25■□□□□ 0.35
XRCC3-211ENST00000555055 LRRC4BQ9NT99 713 aa17.25■□□□□ 0.35
XRCC3-211ENST00000555055 CNTNAP4Q9C0A0 1308 aa17.25■□□□□ 0.35
XRCC3-211ENST00000555055 RREB1Q92766 1687 aa17.25■□□□□ 0.35
XRCC3-211ENST00000555055 A0A1B0GVL5 298 aa17.25■□□□□ 0.35
XRCC3-211ENST00000555055 GUCY1A2P33402 732 aa17.25■□□□□ 0.35
XRCC3-211ENST00000555055 AKNAD1Q5T1N1 836 aa17.25■□□□□ 0.35
XRCC3-211ENST00000555055 DNAJC25Q9H1X3 360 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms