RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 MAP4K4O95819 1239 aaPredicted RBP12.9□□□□□ -0.34
TMEM260-206ENST00000555046 SPDYE6P0CI01 402 aa12.9□□□□□ -0.34
TMEM260-206ENST00000555046 ATP5JP18859 108 aa12.9□□□□□ -0.34
TMEM260-206ENST00000555046 MCAMP43121 646 aa12.9□□□□□ -0.34
TMEM260-206ENST00000555046 ANGEL2Q5VTE6 544 aaKnown RBP12.9□□□□□ -0.34
TMEM260-206ENST00000555046 APOBEC3FQ8IUX4 373 aaKnown RBP12.9□□□□□ -0.34
TMEM260-206ENST00000555046 ECHDC1Q9NTX5 307 aa12.9□□□□□ -0.34
TMEM260-206ENST00000555046 RAI14Q9P0K7 980 aa12.9□□□□□ -0.34
TMEM260-206ENST00000555046 AKAP11Q9UKA4 1901 aa12.9□□□□□ -0.35
TMEM260-206ENST00000555046 ERC2O15083 957 aa12.89□□□□□ -0.35
TMEM260-206ENST00000555046 TNNI2P48788 182 aa12.89□□□□□ -0.35
TMEM260-206ENST00000555046 MAP3K12Q12852 859 aa12.89□□□□□ -0.35
TMEM260-206ENST00000555046 NBPF9Q3BBW0 867 aa12.89□□□□□ -0.35
TMEM260-206ENST00000555046 CST9Q5W186 159 aa12.89□□□□□ -0.35
TMEM260-206ENST00000555046 USP48Q86UV5 1035 aa12.89□□□□□ -0.35
TMEM260-206ENST00000555046 CERS3Q8IU89 383 aa12.89□□□□□ -0.35
TMEM260-206ENST00000555046 ZBED3Q96IU2 234 aaPredicted RBP12.89□□□□□ -0.35
TMEM260-206ENST00000555046 PRMT6Q96LA8 375 aaPredicted RBP12.89□□□□□ -0.35
TMEM260-206ENST00000555046 NOL10Q9BSC4 688 aaKnown RBP12.89□□□□□ -0.35
TMEM260-206ENST00000555046 GGA3Q9NZ52 723 aa12.89□□□□□ -0.35
TMEM260-206ENST00000555046 HPS5Q9UPZ3 1129 aa12.89□□□□□ -0.35
TMEM260-206ENST00000555046 PPP2R3BQ9Y5P8 575 aa12.89□□□□□ -0.35
TMEM260-206ENST00000555046 BAG3O95817 575 aa12.88□□□□□ -0.35
TMEM260-206ENST00000555046 EGFRP00533 1210 aa12.88□□□□□ -0.35
TMEM260-206ENST00000555046 PRDX5P30044 214 aa12.88□□□□□ -0.35
TMEM260-206ENST00000555046 NF2P35240 595 aa12.88□□□□□ -0.35
TMEM260-206ENST00000555046 IRX6P78412 446 aaPredicted RBP12.88□□□□□ -0.35
TMEM260-206ENST00000555046 SMC5Q8IY18 1101 aa12.88□□□□□ -0.35
TMEM260-206ENST00000555046 SNRKQ9NRH2 765 aa12.88□□□□□ -0.35
TMEM260-206ENST00000555046 TLR7Q9NYK1 1049 aaKnown RBP12.88□□□□□ -0.35
TMEM260-206ENST00000555046 KIAA0100Q14667 2235 aaKnown RBP12.87□□□□□ -0.35
TMEM260-206ENST00000555046 TRAF5O00463 557 aa12.87□□□□□ -0.35
TMEM260-206ENST00000555046 SMARCA5O60264 1052 aaPredicted RBP12.87□□□□□ -0.35
TMEM260-206ENST00000555046 CYP2E1P05181 493 aaPredicted RBP12.87□□□□□ -0.35
TMEM260-206ENST00000555046 PLCG2P16885 1265 aa12.87□□□□□ -0.35
TMEM260-206ENST00000555046 ZAP70P43403 619 aa12.87□□□□□ -0.35
TMEM260-206ENST00000555046 LRRFIP1Q32MZ4 808 aaKnown RBP12.87□□□□□ -0.35
TMEM260-206ENST00000555046 SUPT20HL1Q3ZLR7 823 aa12.87□□□□□ -0.35
TMEM260-206ENST00000555046 FKBP1CQ5VVH2 108 aa12.87□□□□□ -0.35
TMEM260-206ENST00000555046 HOOK2Q96ED9 719 aa12.87□□□□□ -0.35
TMEM260-206ENST00000555046 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.87□□□□□ -0.35
TMEM260-206ENST00000555046 ZNF70Q9UC06 446 aaPredicted RBP12.87□□□□□ -0.35
TMEM260-206ENST00000555046 TTC41PQ6P2S7 1318 aa12.87□□□□□ -0.35
TMEM260-206ENST00000555046 IGHDP01880 384 aa12.86□□□□□ -0.35
TMEM260-206ENST00000555046 MECOMQ03112 1051 aa12.86□□□□□ -0.35
TMEM260-206ENST00000555046 ERICH6BQ5W0A0 696 aa12.86□□□□□ -0.35
TMEM260-206ENST00000555046 NAA16Q6N069 864 aaPredicted RBP12.86□□□□□ -0.35
TMEM260-206ENST00000555046 ZSCAN25Q6NSZ9 544 aa12.86□□□□□ -0.35
TMEM260-206ENST00000555046 APOBEC3HQ6NTF7 200 aaKnown RBP12.86□□□□□ -0.35
TMEM260-206ENST00000555046 TBC1D9Q6ZT07 1266 aa12.86□□□□□ -0.35
TMEM260-206ENST00000555046 C2orf69Q8N8R5 385 aa12.86□□□□□ -0.35
TMEM260-206ENST00000555046 ZIC5Q96T25 663 aa12.86□□□□□ -0.35
TMEM260-206ENST00000555046 HAUS7Q99871 368 aa12.86□□□□□ -0.35
TMEM260-206ENST00000555046 GLIS2Q9BZE0 524 aaPredicted RBP12.86□□□□□ -0.35
TMEM260-206ENST00000555046 DEFB129Q9H1M3 183 aa12.86□□□□□ -0.35
TMEM260-206ENST00000555046 BOLA2Q9H3K6 86 aa12.86□□□□□ -0.35
TMEM260-206ENST00000555046 TDRD3Q9H7E2 651 aaKnown RBP12.86□□□□□ -0.35
TMEM260-206ENST00000555046 VEZTQ9HBM0 779 aa12.86□□□□□ -0.35
TMEM260-206ENST00000555046 SPEF2Q9C093 1822 aa12.85□□□□□ -0.35
TMEM260-206ENST00000555046 RBBP6Q7Z6E9 1792 aaKnown RBP12.85□□□□□ -0.35
TMEM260-206ENST00000555046 GPR75-ASB3A0A0A6YYF3 556 aa12.85□□□□□ -0.35
TMEM260-206ENST00000555046 IDH1O75874 414 aaKnown RBP12.85□□□□□ -0.35
TMEM260-206ENST00000555046 GLRX3O76003 335 aaKnown RBP12.85□□□□□ -0.35
TMEM260-206ENST00000555046 FKBP1BP68106 108 aa12.85□□□□□ -0.35
TMEM260-206ENST00000555046 NUCB1Q02818 461 aa12.85□□□□□ -0.35
TMEM260-206ENST00000555046 GRIK5Q16478 980 aa12.85□□□□□ -0.35
TMEM260-206ENST00000555046 SPDYE2Q495Y8 402 aa12.85□□□□□ -0.35
TMEM260-206ENST00000555046 PI16Q6UXB8 463 aa12.85□□□□□ -0.35
TMEM260-206ENST00000555046 CTU1Q7Z7A3 348 aaKnown RBP12.85□□□□□ -0.35
TMEM260-206ENST00000555046 SAPCD2Q86UD0 394 aa12.85□□□□□ -0.35
TMEM260-206ENST00000555046 FAM83AQ86UY5 434 aa12.85□□□□□ -0.35
TMEM260-206ENST00000555046 CHD1LQ86WJ1 897 aa12.85□□□□□ -0.35
TMEM260-206ENST00000555046 NSUN4Q96CB9 384 aaKnown RBP12.85□□□□□ -0.35
TMEM260-206ENST00000555046 USP40Q9NVE5 1235 aa12.85□□□□□ -0.35
TMEM260-206ENST00000555046 CELF2O95319 508 aaKnown RBP12.84□□□□□ -0.35
TMEM260-206ENST00000555046 MX1P20591 662 aa12.84□□□□□ -0.35
TMEM260-206ENST00000555046 DNAJC2Q99543 621 aaKnown RBP12.84□□□□□ -0.35
TMEM260-206ENST00000555046 PAG1Q9NWQ8 432 aa12.84□□□□□ -0.35
TMEM260-206ENST00000555046 COLQQ9Y215 455 aaPredicted RBP12.84□□□□□ -0.35
TMEM260-206ENST00000555046 DAGLAQ9Y4D2 1042 aa12.84□□□□□ -0.35
TMEM260-206ENST00000555046 VCANP13611 3396 aa12.83□□□□□ -0.36
TMEM260-206ENST00000555046 LAMA3Q16787 3333 aa12.83□□□□□ -0.36
TMEM260-206ENST00000555046 CLRN2A0PK11 232 aa12.83□□□□□ -0.36
TMEM260-206ENST00000555046 GOLIM4O00461 696 aa12.83□□□□□ -0.36
TMEM260-206ENST00000555046 PPP1R12BO60237 982 aaPredicted RBP12.83□□□□□ -0.36
TMEM260-206ENST00000555046 NPM3O75607 178 aaKnown RBP12.83□□□□□ -0.36
TMEM260-206ENST00000555046 PPP4CP60510 307 aa12.83□□□□□ -0.36
TMEM260-206ENST00000555046 RASA3Q14644 834 aa12.83□□□□□ -0.36
TMEM260-206ENST00000555046 DIXDC1Q155Q3 683 aa12.83□□□□□ -0.36
TMEM260-206ENST00000555046 SLC9C2Q5TAH2 1124 aa12.83□□□□□ -0.36
TMEM260-206ENST00000555046 B4GALNT3Q6L9W6 998 aa12.83□□□□□ -0.36
TMEM260-206ENST00000555046 CDC42EP5Q6NZY7 148 aa12.83□□□□□ -0.36
TMEM260-206ENST00000555046 TICAM2Q86XR7 235 aa12.83□□□□□ -0.36
TMEM260-206ENST00000555046 ZNF408Q9H9D4 720 aa12.83□□□□□ -0.36
TMEM260-206ENST00000555046 SCN9AQ15858 1988 aa12.83□□□□□ -0.36
TMEM260-206ENST00000555046 MROH7-TTC4A0A0A0MT08 1334 aa12.83□□□□□ -0.36
TMEM260-206ENST00000555046 GAKO14976 1311 aa12.83□□□□□ -0.36
TMEM260-206ENST00000555046 UNCXA6NJT0 531 aa12.82□□□□□ -0.36
TMEM260-206ENST00000555046 TCP10L2B9ZVM9 353 aa12.82□□□□□ -0.36
TMEM260-206ENST00000555046 CYP7A1P22680 504 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms