RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 USP26Q9BXU7 913 aa13.38□□□□□ -0.27
SRP54-205ENST00000554803 DEFB129Q9H1M3 183 aa13.38□□□□□ -0.27
SRP54-205ENST00000554803 IGKV5-2P06315 115 aa13.37□□□□□ -0.27
SRP54-205ENST00000554803 GNAI3P08754 354 aa13.37□□□□□ -0.27
SRP54-205ENST00000554803 MCCP23508 829 aa13.37□□□□□ -0.27
SRP54-205ENST00000554803 ZNF445P59923 1031 aa13.37□□□□□ -0.27
SRP54-205ENST00000554803 TRIM28Q13263 835 aaKnown RBP13.37□□□□□ -0.27
SRP54-205ENST00000554803 CWF19L2Q2TBE0 894 aaKnown RBP13.37□□□□□ -0.27
SRP54-205ENST00000554803 UBE2Q1Q7Z7E8 422 aa13.37□□□□□ -0.27
SRP54-205ENST00000554803 METTL22Q9BUU2 404 aaPredicted RBP13.37□□□□□ -0.27
SRP54-205ENST00000554803 NR2E3Q9Y5X4 410 aa13.37□□□□□ -0.27
SRP54-205ENST00000554803 VCANP13611 3396 aa13.36□□□□□ -0.27
SRP54-205ENST00000554803 ATP5J2-PTCD1G3V325 749 aa13.36□□□□□ -0.27
SRP54-205ENST00000554803 ERC2O15083 957 aa13.36□□□□□ -0.27
SRP54-205ENST00000554803 CYP2E1P05181 493 aaPredicted RBP13.36□□□□□ -0.27
SRP54-205ENST00000554803 PPP1R9BQ96SB3 815 aa13.36□□□□□ -0.27
SRP54-205ENST00000554803 MEIS3Q99687 375 aa13.36□□□□□ -0.27
SRP54-205ENST00000554803 COL25A1Q9BXS0 654 aaPredicted RBP13.36□□□□□ -0.27
SRP54-205ENST00000554803 ZFYVE28Q9HCC9 887 aa13.36□□□□□ -0.27
SRP54-205ENST00000554803 PPP2R3BQ9Y5P8 575 aa13.36□□□□□ -0.27
SRP54-205ENST00000554803 SPTBN5Q9NRC6 3674 aaKnown RBP13.36□□□□□ -0.27
SRP54-205ENST00000554803 GSPT1P15170 499 aaKnown RBP13.35□□□□□ -0.27
SRP54-205ENST00000554803 TERF1P54274 439 aa13.35□□□□□ -0.27
SRP54-205ENST00000554803 TAF1CQ15572 869 aaPredicted RBP13.35□□□□□ -0.27
SRP54-205ENST00000554803 ANKRD13AQ8IZ07 590 aa13.35□□□□□ -0.27
SRP54-205ENST00000554803 NKX2-3Q8TAU0 364 aa13.35□□□□□ -0.27
SRP54-205ENST00000554803 FBXW7Q969H0 707 aa13.35□□□□□ -0.27
SRP54-205ENST00000554803 C1orf115Q9H7X2 142 aa13.35□□□□□ -0.27
SRP54-205ENST00000554803 MGAMO43451 1857 aa13.35□□□□□ -0.27
SRP54-205ENST00000554803 ESPNB1AK53 854 aa13.34□□□□□ -0.27
SRP54-205ENST00000554803 USP2O75604 605 aaPredicted RBP13.34□□□□□ -0.27
SRP54-205ENST00000554803 BAG4O95429 457 aaKnown RBP13.34□□□□□ -0.27
SRP54-205ENST00000554803 MBD3O95983 291 aa13.34□□□□□ -0.27
SRP54-205ENST00000554803 IREB2P48200 963 aaKnown RBP13.34□□□□□ -0.27
SRP54-205ENST00000554803 PRMT2P55345 433 aa13.34□□□□□ -0.27
SRP54-205ENST00000554803 MTFR1Q15390 333 aa13.34□□□□□ -0.27
SRP54-205ENST00000554803 SUPT20HL1Q3ZLR7 823 aa13.34□□□□□ -0.27
SRP54-205ENST00000554803 CCDC152Q4G0S7 254 aa13.34□□□□□ -0.27
SRP54-205ENST00000554803 GPR153Q6NV75 609 aa13.34□□□□□ -0.27
SRP54-205ENST00000554803 SPRYD3Q8NCJ5 442 aa13.34□□□□□ -0.27
SRP54-205ENST00000554803 LINS1Q8NG48 757 aa13.34□□□□□ -0.27
SRP54-205ENST00000554803 INTS4Q96HW7 963 aaKnown RBP13.34□□□□□ -0.27
SRP54-205ENST00000554803 MS4A4AQ96JQ5 239 aa13.34□□□□□ -0.27
SRP54-205ENST00000554803 COA1Q9GZY4 146 aa13.34□□□□□ -0.27
SRP54-205ENST00000554803 ZNF804BA4D1E1 1349 aa13.34□□□□□ -0.27
SRP54-205ENST00000554803 NEURL1BA8MQ27 555 aa13.33□□□□□ -0.28
SRP54-205ENST00000554803 GNRH1P01148 92 aa13.33□□□□□ -0.28
SRP54-205ENST00000554803 GNAI2P04899 355 aa13.33□□□□□ -0.28
SRP54-205ENST00000554803 KIAA0825Q8IV33 1275 aa13.33□□□□□ -0.28
SRP54-205ENST00000554803 ZBTB38Q8NAP3 1195 aaPredicted RBP13.33□□□□□ -0.28
SRP54-205ENST00000554803 BRI3BPQ8WY22 251 aa13.33□□□□□ -0.28
SRP54-205ENST00000554803 ARHGAP39Q9C0H5 1083 aa13.33□□□□□ -0.28
SRP54-205ENST00000554803 USP44Q9H0E7 712 aa13.33□□□□□ -0.28
SRP54-205ENST00000554803 STXBP5LQ9Y2K9 1186 aa13.33□□□□□ -0.28
SRP54-205ENST00000554803 TTC28Q96AY4 2481 aa13.33□□□□□ -0.28
SRP54-205ENST00000554803 ALDH1L1O75891 902 aa13.32□□□□□ -0.28
SRP54-205ENST00000554803 PDIA4P13667 645 aaKnown RBP13.32□□□□□ -0.28
SRP54-205ENST00000554803 MCM5P33992 734 aa13.32□□□□□ -0.28
SRP54-205ENST00000554803 GJA8P48165 433 aa13.32□□□□□ -0.28
SRP54-205ENST00000554803 NEXNQ0ZGT2 675 aa13.32□□□□□ -0.28
SRP54-205ENST00000554803 ANKRD18AQ8IVF6 992 aa13.32□□□□□ -0.28
SRP54-205ENST00000554803 JARID2Q92833 1246 aaPredicted RBP13.32□□□□□ -0.28
SRP54-205ENST00000554803 OPTNQ96CV9 577 aa13.32□□□□□ -0.28
SRP54-205ENST00000554803 GZF1Q9H116 711 aaPredicted RBP13.32□□□□□ -0.28
SRP54-205ENST00000554803 RRAGDQ9NQL2 400 aaPredicted RBP13.32□□□□□ -0.28
SRP54-205ENST00000554803 DDX49Q9Y6V7 483 aaKnown RBP13.32□□□□□ -0.28
SRP54-205ENST00000554803 ARAP2Q8WZ64 1704 aa13.32□□□□□ -0.28
SRP54-205ENST00000554803 TPM2P07951 284 aa13.31□□□□□ -0.28
SRP54-205ENST00000554803 GJB1P08034 283 aa13.31□□□□□ -0.28
SRP54-205ENST00000554803 SDSP20132 328 aa13.31□□□□□ -0.28
SRP54-205ENST00000554803 LACTBP83111 547 aaPredicted RBP13.31□□□□□ -0.28
SRP54-205ENST00000554803 GCKRQ14397 625 aa13.31□□□□□ -0.28
SRP54-205ENST00000554803 KIF22Q14807 665 aa13.31□□□□□ -0.28
SRP54-205ENST00000554803 DLGAP5Q15398 846 aa13.31□□□□□ -0.28
SRP54-205ENST00000554803 NBPF12Q5TAG4 269 aaPredicted RBP13.31□□□□□ -0.28
SRP54-205ENST00000554803 TTLL5Q6EMB2 1281 aa13.31□□□□□ -0.28
SRP54-205ENST00000554803 DEFB123Q8N688 67 aa13.31□□□□□ -0.28
SRP54-205ENST00000554803 MTMR14Q8NCE2 650 aa13.31□□□□□ -0.28
SRP54-205ENST00000554803 ELP3Q9H9T3 547 aa13.31□□□□□ -0.28
SRP54-205ENST00000554803 STAP2Q9UGK3 403 aa13.31□□□□□ -0.28
SRP54-205ENST00000554803 CCL15-CCL14A0A0B4J2E2 113 aa13.3□□□□□ -0.28
SRP54-205ENST00000554803 TLR2O60603 784 aa13.3□□□□□ -0.28
SRP54-205ENST00000554803 PDE8AO60658 829 aa13.3□□□□□ -0.28
SRP54-205ENST00000554803 NBPF7P0C2Y1 421 aaPredicted RBP13.3□□□□□ -0.28
SRP54-205ENST00000554803 NASPP49321 788 aaPredicted RBP13.3□□□□□ -0.28
SRP54-205ENST00000554803 CCL15Q16663 113 aa13.3□□□□□ -0.28
SRP54-205ENST00000554803 CCDC191Q8NCU4 936 aa13.3□□□□□ -0.28
SRP54-205ENST00000554803 SYAP1Q96A49 352 aaPredicted RBP13.3□□□□□ -0.28
SRP54-205ENST00000554803 HDAC5Q9UQL6 1122 aa13.3□□□□□ -0.28
SRP54-205ENST00000554803 RAB11FIP3O75154 756 aa13.29□□□□□ -0.28
SRP54-205ENST00000554803 WDHD1O75717 1129 aaPredicted RBP13.29□□□□□ -0.28
SRP54-205ENST00000554803 GTF2A2P52657 109 aa13.29□□□□□ -0.28
SRP54-205ENST00000554803 PDE1AP54750 535 aa13.29□□□□□ -0.28
SRP54-205ENST00000554803 GLIPR1L2Q4G1C9 344 aa13.29□□□□□ -0.28
SRP54-205ENST00000554803 TXNRD3Q86VQ6 643 aa13.29□□□□□ -0.28
SRP54-205ENST00000554803 CCDC85AQ96PX6 553 aaPredicted RBP13.29□□□□□ -0.28
SRP54-205ENST00000554803 CWC25Q9NXE8 425 aaPredicted RBP13.29□□□□□ -0.28
SRP54-205ENST00000554803 MINPP1Q9UNW1 487 aa13.29□□□□□ -0.28
SRP54-205ENST00000554803 UTYO14607 1347 aa13.29□□□□□ -0.28
SRP54-205ENST00000554803 A0A1B0GUL6 1792 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms