RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 ZKSCAN4Q969J2 545 aaPredicted RBP27.73■■■□□ 2.03
GABRB3-206ENST00000554556 ARMC5Q96C12 935 aa27.73■■■□□ 2.03
GABRB3-206ENST00000554556 API5Q9BZZ5 524 aaKnown RBP27.73■■■□□ 2.03
GABRB3-206ENST00000554556 SIL1Q9H173 461 aa27.73■■■□□ 2.03
GABRB3-206ENST00000554556 PPIL2Q13356 520 aa27.72■■■□□ 2.03
GABRB3-206ENST00000554556 NOB1Q9ULX3 412 aaKnown RBP27.72■■■□□ 2.03
GABRB3-206ENST00000554556 POTEFA5A3E0 1075 aa27.71■■■□□ 2.03
GABRB3-206ENST00000554556 LDHBP07195 334 aaKnown RBP27.71■■■□□ 2.03
GABRB3-206ENST00000554556 DENND2AQ9ULE3 1009 aa27.71■■■□□ 2.03
GABRB3-206ENST00000554556 IRF6O14896 467 aa27.7■■■□□ 2.02
GABRB3-206ENST00000554556 SEMA3EO15041 775 aa27.7■■■□□ 2.02
GABRB3-206ENST00000554556 IL15P40933 162 aaPredicted RBP27.7■■■□□ 2.02
GABRB3-206ENST00000554556 PPATQ06203 517 aa27.7■■■□□ 2.02
GABRB3-206ENST00000554556 KIF22Q14807 665 aa27.7■■■□□ 2.02
GABRB3-206ENST00000554556 MIGA2Q7L4E1 593 aa27.7■■■□□ 2.02
GABRB3-206ENST00000554556 NBPF11Q86T75 865 aa27.7■■■□□ 2.02
GABRB3-206ENST00000554556 DAGLAQ9Y4D2 1042 aa27.7■■■□□ 2.02
GABRB3-206ENST00000554556 TLR2O60603 784 aa27.69■■■□□ 2.02
GABRB3-206ENST00000554556 CDC42EP5Q6NZY7 148 aa27.69■■■□□ 2.02
GABRB3-206ENST00000554556 TMEM106CQ9BVX2 250 aa27.69■■■□□ 2.02
GABRB3-206ENST00000554556 RBBP6Q7Z6E9 1792 aaKnown RBP27.68■■■□□ 2.02
GABRB3-206ENST00000554556 BTBD19C9JJ37 291 aa27.68■■■□□ 2.02
GABRB3-206ENST00000554556 PRDX5P30044 214 aa27.68■■■□□ 2.02
GABRB3-206ENST00000554556 TCP10Q12799 353 aa27.68■■■□□ 2.02
GABRB3-206ENST00000554556 PCDH10Q9P2E7 1040 aa27.68■■■□□ 2.02
GABRB3-206ENST00000554556 SALL1Q9NSC2 1324 aa27.67■■■□□ 2.02
GABRB3-206ENST00000554556 CAP1Q01518 475 aa27.67■■■□□ 2.02
GABRB3-206ENST00000554556 DIXDC1Q155Q3 683 aa27.67■■■□□ 2.02
GABRB3-206ENST00000554556 ZGPATQ8N5A5 531 aaKnown RBP27.67■■■□□ 2.02
GABRB3-206ENST00000554556 USP40Q9NVE5 1235 aa27.67■■■□□ 2.02
GABRB3-206ENST00000554556 LRRFIP2Q9Y608 721 aaKnown RBP27.67■■■□□ 2.02
GABRB3-206ENST00000554556 INPP5BP32019 993 aa27.66■■■□□ 2.02
GABRB3-206ENST00000554556 SLC9C1Q4G0N8 1177 aa27.66■■■□□ 2.02
GABRB3-206ENST00000554556 ZNF112Q9UJU3 913 aa27.66■■■□□ 2.02
GABRB3-206ENST00000554556 KIAA0100Q14667 2235 aaKnown RBP27.65■■■□□ 2.02
GABRB3-206ENST00000554556 ZBTB22O15209 634 aa27.65■■■□□ 2.02
GABRB3-206ENST00000554556 PHKA1P46020 1223 aa27.65■■■□□ 2.02
GABRB3-206ENST00000554556 GCC1Q96CN9 775 aa27.65■■■□□ 2.02
GABRB3-206ENST00000554556 COPRSQ9NQ92 184 aa27.65■■■□□ 2.02
GABRB3-206ENST00000554556 PTCH2Q9Y6C5 1203 aa27.65■■■□□ 2.02
GABRB3-206ENST00000554556 GNRH1P01148 92 aa27.64■■■□□ 2.02
GABRB3-206ENST00000554556 ZNF333Q96JL9 665 aa27.64■■■□□ 2.02
GABRB3-206ENST00000554556 PA2G4Q9UQ80 394 aaKnown RBP27.64■■■□□ 2.02
GABRB3-206ENST00000554556 LACTBP83111 547 aaPredicted RBP27.63■■■□□ 2.01
GABRB3-206ENST00000554556 NFIAQ12857 509 aa27.63■■■□□ 2.01
GABRB3-206ENST00000554556 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.63■■■□□ 2.01
GABRB3-206ENST00000554556 MYH2Q9UKX2 1941 aa27.63■■■□□ 2.01
GABRB3-206ENST00000554556 EN2P19622 333 aaPredicted RBP27.62■■■□□ 2.01
GABRB3-206ENST00000554556 PRMT2P55345 433 aa27.62■■■□□ 2.01
GABRB3-206ENST00000554556 CCDC102BQ68D86 513 aa27.62■■■□□ 2.01
GABRB3-206ENST00000554556 ANKRD23Q86SG2 305 aa27.62■■■□□ 2.01
GABRB3-206ENST00000554556 SLF2Q8IX21 1173 aa27.62■■■□□ 2.01
GABRB3-206ENST00000554556 FAM198AQ9UFP1 575 aa27.62■■■□□ 2.01
GABRB3-206ENST00000554556 GNAI3P08754 354 aa27.61■■■□□ 2.01
GABRB3-206ENST00000554556 NOL9Q5SY16 702 aaKnown RBP27.61■■■□□ 2.01
GABRB3-206ENST00000554556 ARHGAP45Q92619 1136 aa27.61■■■□□ 2.01
GABRB3-206ENST00000554556 MEIS3Q99687 375 aa27.61■■■□□ 2.01
GABRB3-206ENST00000554556 KCNH4Q9UQ05 1017 aa27.61■■■□□ 2.01
GABRB3-206ENST00000554556 SLC4A8Q2Y0W8 1093 aa27.6■■■□□ 2.01
GABRB3-206ENST00000554556 AKAP2Q9Y2D5 859 aa27.6■■■□□ 2.01
GABRB3-206ENST00000554556 ENTPD3O75355 529 aa27.59■■■□□ 2.01
GABRB3-206ENST00000554556 RARSP54136 660 aaKnown RBP27.59■■■□□ 2.01
GABRB3-206ENST00000554556 SPTY2D1Q68D10 685 aaPredicted RBP27.59■■■□□ 2.01
GABRB3-206ENST00000554556 C17orf99Q6UX52 265 aa27.59■■■□□ 2.01
GABRB3-206ENST00000554556 DZIP1Q86YF9 867 aaKnown RBP27.59■■■□□ 2.01
GABRB3-206ENST00000554556 PDHXO00330 501 aa27.58■■■□□ 2.01
GABRB3-206ENST00000554556 ADORA1P30542 326 aa27.58■■■□□ 2.01
GABRB3-206ENST00000554556 TIMM10P62072 90 aa27.58■■■□□ 2.01
GABRB3-206ENST00000554556 IDI2Q9BXS1 227 aa27.58■■■□□ 2.01
GABRB3-206ENST00000554556 ARHGAP39Q9C0H5 1083 aa27.58■■■□□ 2.01
GABRB3-206ENST00000554556 ABCF2Q9UG63 623 aa27.58■■■□□ 2.01
GABRB3-206ENST00000554556 CXCL11O14625 94 aa27.57■■■□□ 2
GABRB3-206ENST00000554556 HOXD10P28358 340 aa27.57■■■□□ 2
GABRB3-206ENST00000554556 PDS5AQ29RF7 1337 aaKnown RBP27.57■■■□□ 2
GABRB3-206ENST00000554556 SRGAP3O43295 1099 aa27.56■■■□□ 2
GABRB3-206ENST00000554556 RGS3P49796 1198 aa27.56■■■□□ 2
GABRB3-206ENST00000554556 MVPQ14764 893 aaKnown RBP27.56■■■□□ 2
GABRB3-206ENST00000554556 ZSCAN29Q8IWY8 852 aaPredicted RBP27.56■■■□□ 2
GABRB3-206ENST00000554556 ZFPM1Q8IX07 1006 aa27.56■■■□□ 2
GABRB3-206ENST00000554556 FAM163AQ96GL9 167 aaPredicted RBP27.56■■■□□ 2
GABRB3-206ENST00000554556 CPA4Q9UI42 421 aa27.56■■■□□ 2
GABRB3-206ENST00000554556 GAKO14976 1311 aa27.56■■■□□ 2
GABRB3-206ENST00000554556 A0A1B0GUL7 405 aa27.55■■■□□ 2
GABRB3-206ENST00000554556 CCER2I3L3R5 266 aa27.55■■■□□ 2
GABRB3-206ENST00000554556 IPO8O15397 1037 aaKnown RBP27.55■■■□□ 2
GABRB3-206ENST00000554556 RASGRF1Q13972 1273 aa27.55■■■□□ 2
GABRB3-206ENST00000554556 PICK1Q9NRD5 415 aa27.55■■■□□ 2
GABRB3-206ENST00000554556 ZSWIM8A7E2V4 1837 aa27.54■■■□□ 2
GABRB3-206ENST00000554556 PSMC4P43686 418 aa27.54■■■□□ 2
GABRB3-206ENST00000554556 DOCK2Q92608 1830 aa27.54■■■□□ 2
GABRB3-206ENST00000554556 XAGE2Q96GT9 111 aa27.54■■■□□ 2
GABRB3-206ENST00000554556 HTTP42858 3142 aa27.53■■■□□ 2
GABRB3-206ENST00000554556 TFCP2Q12800 502 aa27.53■■■□□ 2
GABRB3-206ENST00000554556 MTX1Q13505 466 aa27.53■■■□□ 2
GABRB3-206ENST00000554556 ERICH6Q7L0X2 663 aa27.53■■■□□ 2
GABRB3-206ENST00000554556 SCYL3Q8IZE3 742 aa27.53■■■□□ 2
GABRB3-206ENST00000554556 SH3TC2Q8TF17 1288 aa27.53■■■□□ 2
GABRB3-206ENST00000554556 PARK7Q99497 189 aaKnown RBP27.53■■■□□ 2
GABRB3-206ENST00000554556 PHF20L1A8MW92 1017 aa27.52■■■□□ 2
GABRB3-206ENST00000554556 FMNL1O95466 1100 aaPredicted RBP27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms