RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 PRDM6Q9NQX0 595 aa8.39□□□□□ -1.07
ATXN3-226ENST00000554350 TFIP11Q9UBB9 837 aaKnown RBP8.39□□□□□ -1.07
ATXN3-226ENST00000554350 COL24A1Q17RW2 1714 aa8.38□□□□□ -1.07
ATXN3-226ENST00000554350 M0R082 166 aa8.38□□□□□ -1.07
ATXN3-226ENST00000554350 PPP1R12BO60237 982 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-226ENST00000554350 ALAS2P22557 587 aa8.38□□□□□ -1.07
ATXN3-226ENST00000554350 C20orf204Q6ZNR8 217 aa8.38□□□□□ -1.07
ATXN3-226ENST00000554350 ALDH16A1Q8IZ83 802 aa8.38□□□□□ -1.07
ATXN3-226ENST00000554350 MICALL1Q8N3F8 863 aa8.38□□□□□ -1.07
ATXN3-226ENST00000554350 ZNF417Q8TAU3 575 aa8.38□□□□□ -1.07
ATXN3-226ENST00000554350 CEP63Q96MT8 703 aa8.38□□□□□ -1.07
ATXN3-226ENST00000554350 ZNF587Q96SQ5 575 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-226ENST00000554350 USP6P35125 1406 aa8.37□□□□□ -1.07
ATXN3-226ENST00000554350 NHSQ6T4R5 1651 aa8.37□□□□□ -1.07
ATXN3-226ENST00000554350 CCDC85CA6NKD9 419 aa8.37□□□□□ -1.07
ATXN3-226ENST00000554350 GCP02774 474 aa8.37□□□□□ -1.07
ATXN3-226ENST00000554350 ADH7P40394 386 aa8.37□□□□□ -1.07
ATXN3-226ENST00000554350 SMC1BQ8NDV3 1235 aa8.37□□□□□ -1.07
ATXN3-226ENST00000554350 KCNH4Q9UQ05 1017 aa8.37□□□□□ -1.07
ATXN3-226ENST00000554350 QSER1Q2KHR3 1735 aa8.37□□□□□ -1.07
ATXN3-226ENST00000554350 BTAF1O14981 1849 aa8.36□□□□□ -1.07
ATXN3-226ENST00000554350 TUBGCP6Q96RT7 1819 aa8.36□□□□□ -1.07
ATXN3-226ENST00000554350 WNK3Q9BYP7 1800 aa8.36□□□□□ -1.07
ATXN3-226ENST00000554350 FOXN1O15353 648 aa8.36□□□□□ -1.07
ATXN3-226ENST00000554350 NID1P14543 1247 aa8.36□□□□□ -1.07
ATXN3-226ENST00000554350 RASA1P20936 1047 aa8.36□□□□□ -1.07
ATXN3-226ENST00000554350 DOC2BQ14184 412 aa8.36□□□□□ -1.07
ATXN3-226ENST00000554350 NLRP13Q86W25 1043 aa8.36□□□□□ -1.07
ATXN3-226ENST00000554350 ABHD8Q96I13 439 aa8.36□□□□□ -1.07
ATXN3-226ENST00000554350 ANKIB1Q9P2G1 1089 aa8.36□□□□□ -1.07
ATXN3-226ENST00000554350 PCNTO95613 3336 aa8.36□□□□□ -1.07
ATXN3-226ENST00000554350 WDR17Q8IZU2 1322 aa8.35□□□□□ -1.07
ATXN3-226ENST00000554350 FAM229AH3BQW9 127 aa8.35□□□□□ -1.07
ATXN3-226ENST00000554350 CRTC2Q53ET0 693 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-226ENST00000554350 ARHGAP27Q6ZUM4 889 aa8.35□□□□□ -1.07
ATXN3-226ENST00000554350 BTLAQ7Z6A9 289 aa8.35□□□□□ -1.07
ATXN3-226ENST00000554350 COL23A1Q86Y22 540 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-226ENST00000554350 SCG3Q8WXD2 468 aaKnown RBP8.35□□□□□ -1.07
ATXN3-226ENST00000554350 CHMP3Q9Y3E7 222 aa8.35□□□□□ -1.07
ATXN3-226ENST00000554350 PIK3C2GO75747 1445 aa8.35□□□□□ -1.07
ATXN3-226ENST00000554350 KDM2BQ8NHM5 1336 aa8.34□□□□□ -1.07
ATXN3-226ENST00000554350 GRNP28799 593 aaKnown RBP8.34□□□□□ -1.07
ATXN3-226ENST00000554350 SEC13P55735 322 aa8.34□□□□□ -1.07
ATXN3-226ENST00000554350 PTK7Q13308 1070 aa8.34□□□□□ -1.07
ATXN3-226ENST00000554350 CFAP70Q5T0N1 1121 aa8.34□□□□□ -1.07
ATXN3-226ENST00000554350 GAS2L2Q8NHY3 880 aa8.34□□□□□ -1.07
ATXN3-226ENST00000554350 PRDM10Q9NQV6 1147 aa8.34□□□□□ -1.07
ATXN3-226ENST00000554350 DMGDHQ9UI17 866 aaKnown RBP8.34□□□□□ -1.07
ATXN3-226ENST00000554350 TRAK1Q9UPV9 953 aa8.34□□□□□ -1.07
ATXN3-226ENST00000554350 BCS1LQ9Y276 419 aa8.34□□□□□ -1.07
ATXN3-226ENST00000554350 LGR5O75473 907 aa8.33□□□□□ -1.08
ATXN3-226ENST00000554350 GATA4P43694 442 aa8.33□□□□□ -1.08
ATXN3-226ENST00000554350 Q8N3U1 123 aa8.33□□□□□ -1.08
ATXN3-226ENST00000554350 SYTL4Q96C24 671 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-226ENST00000554350 NUDT16Q96DE0 195 aaKnown RBP8.33□□□□□ -1.08
ATXN3-226ENST00000554350 ACEP12821 1306 aa8.32□□□□□ -1.08
ATXN3-226ENST00000554350 KIAA1210Q9ULL0 1709 aa8.32□□□□□ -1.08
ATXN3-226ENST00000554350 CTCFP49711 727 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-226ENST00000554350 C9orf131Q5VYM1 1079 aa8.32□□□□□ -1.08
ATXN3-226ENST00000554350 BHMTQ93088 406 aa8.32□□□□□ -1.08
ATXN3-226ENST00000554350 CARD10Q9BWT7 1032 aa8.32□□□□□ -1.08
ATXN3-226ENST00000554350 PPP1R12CQ9BZL4 782 aa8.32□□□□□ -1.08
ATXN3-226ENST00000554350 C14orf93Q9H972 538 aaKnown RBP8.32□□□□□ -1.08
ATXN3-226ENST00000554350 KCPQ6ZWJ8 1503 aa8.32□□□□□ -1.08
ATXN3-226ENST00000554350 ITSN1Q15811 1721 aa8.32□□□□□ -1.08
ATXN3-226ENST00000554350 PIK3C2AO00443 1686 aa8.31□□□□□ -1.08
ATXN3-226ENST00000554350 LBX1P52954 281 aa8.31□□□□□ -1.08
ATXN3-226ENST00000554350 DPYDQ12882 1025 aa8.31□□□□□ -1.08
ATXN3-226ENST00000554350 RSPO4Q2I0M5 234 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-226ENST00000554350 IER5Q5VY09 327 aa8.31□□□□□ -1.08
ATXN3-226ENST00000554350 CCNL1Q9UK58 526 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-226ENST00000554350 TRPM1Q7Z4N2 1603 aa8.31□□□□□ -1.08
ATXN3-226ENST00000554350 SPDYE3A6NKU9 549 aa8.3□□□□□ -1.08
ATXN3-226ENST00000554350 NEUROD1Q13562 356 aa8.3□□□□□ -1.08
ATXN3-226ENST00000554350 RTN1Q16799 776 aa8.3□□□□□ -1.08
ATXN3-226ENST00000554350 PRRT3Q5FWE3 981 aa8.3□□□□□ -1.08
ATXN3-226ENST00000554350 NKAPLQ5M9Q1 402 aa8.3□□□□□ -1.08
ATXN3-226ENST00000554350 GSX2Q9BZM3 304 aa8.3□□□□□ -1.08
ATXN3-226ENST00000554350 SEMA6BQ9H3T3 888 aa8.3□□□□□ -1.08
ATXN3-226ENST00000554350 TPSG1Q9NRR2 321 aa8.3□□□□□ -1.08
ATXN3-226ENST00000554350 NAGPAQ9UK23 515 aa8.3□□□□□ -1.08
ATXN3-226ENST00000554350 PLEKHG2Q9H7P9 1386 aa8.3□□□□□ -1.08
ATXN3-226ENST00000554350 PPIP5K1Q6PFW1 1433 aa8.29□□□□□ -1.08
ATXN3-226ENST00000554350 CICQ96RK0 1608 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-226ENST00000554350 USP17L15C9J2P7 530 aa8.29□□□□□ -1.08
ATXN3-226ENST00000554350 USP17L10C9JJH3 530 aa8.29□□□□□ -1.08
ATXN3-226ENST00000554350 USP17L13C9JLJ4 530 aa8.29□□□□□ -1.08
ATXN3-226ENST00000554350 USP17L12C9JPN9 530 aa8.29□□□□□ -1.08
ATXN3-226ENST00000554350 USP17L11C9JVI0 530 aa8.29□□□□□ -1.08
ATXN3-226ENST00000554350 USP17L21D6R901 530 aa8.29□□□□□ -1.08
ATXN3-226ENST00000554350 USP17L18D6R9N7 530 aa8.29□□□□□ -1.08
ATXN3-226ENST00000554350 USP17L22D6RA61 530 aa8.29□□□□□ -1.08
ATXN3-226ENST00000554350 USP17L17D6RBQ6 530 aa8.29□□□□□ -1.08
ATXN3-226ENST00000554350 USP17L19D6RCP7 530 aa8.29□□□□□ -1.08
ATXN3-226ENST00000554350 USP17L20D6RJB6 530 aa8.29□□□□□ -1.08
ATXN3-226ENST00000554350 TGFBR3LH3BV60 316 aa8.29□□□□□ -1.08
ATXN3-226ENST00000554350 USP17L24Q0WX57 530 aa8.29□□□□□ -1.08
ATXN3-226ENST00000554350 SLC6A14Q9UN76 642 aa8.29□□□□□ -1.08
ATXN3-226ENST00000554350 RBM19Q9Y4C8 960 aaKnown RBP8.29□□□□□ -1.08
ATXN3-226ENST00000554350 ABCC6O95255 1503 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms