RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 ARSDP51689 593 aa7.74□□□□□ -1.17
VPS33B-203ENST00000554264 ZC3H6P61129 1189 aaKnown RBP7.74□□□□□ -1.17
VPS33B-203ENST00000554264 ZNF211Q13398 564 aaPredicted RBP7.74□□□□□ -1.17
VPS33B-203ENST00000554264 ZNF468Q5VIY5 522 aaPredicted RBP7.74□□□□□ -1.17
VPS33B-203ENST00000554264 SYT9Q86SS6 491 aa7.74□□□□□ -1.17
VPS33B-203ENST00000554264 RGL4Q8IZJ4 473 aa7.74□□□□□ -1.17
VPS33B-203ENST00000554264 PRR12Q9ULL5 1215 aa7.74□□□□□ -1.17
VPS33B-203ENST00000554264 NOP58Q9Y2X3 529 aaKnown RBP7.74□□□□□ -1.17
VPS33B-203ENST00000554264 KCNMB2Q9Y691 235 aa7.74□□□□□ -1.17
VPS33B-203ENST00000554264 ADGRB1O14514 1584 aa7.74□□□□□ -1.17
VPS33B-203ENST00000554264 NUP188Q5SRE5 1749 aa7.74□□□□□ -1.17
VPS33B-203ENST00000554264 SHISA8B8ZZ34 492 aa7.73□□□□□ -1.17
VPS33B-203ENST00000554264 PLSCR1O15162 318 aa7.73□□□□□ -1.17
VPS33B-203ENST00000554264 OIP5O43482 229 aa7.73□□□□□ -1.17
VPS33B-203ENST00000554264 ABL1P00519 1130 aa7.73□□□□□ -1.17
VPS33B-203ENST00000554264 BCRP11274 1271 aa7.73□□□□□ -1.17
VPS33B-203ENST00000554264 ZAP70P43403 619 aa7.73□□□□□ -1.17
VPS33B-203ENST00000554264 PDE4CQ08493 712 aa7.73□□□□□ -1.17
VPS33B-203ENST00000554264 SVOPQ8N4V2 548 aa7.73□□□□□ -1.17
VPS33B-203ENST00000554264 MDFIQ99750 246 aa7.73□□□□□ -1.17
VPS33B-203ENST00000554264 ZFATQ9P243 1243 aa7.73□□□□□ -1.17
VPS33B-203ENST00000554264 CPDO75976 1380 aa7.72□□□□□ -1.17
VPS33B-203ENST00000554264 NPR3P17342 541 aa7.72□□□□□ -1.17
VPS33B-203ENST00000554264 TRIP4Q15650 581 aaPredicted RBP7.72□□□□□ -1.17
VPS33B-203ENST00000554264 FAM9BQ8IZU0 186 aa7.72□□□□□ -1.17
VPS33B-203ENST00000554264 CMTR1Q8N1G2 835 aaKnown RBP7.72□□□□□ -1.17
VPS33B-203ENST00000554264 GALNT6Q8NCL4 622 aa7.72□□□□□ -1.17
VPS33B-203ENST00000554264 NUDT16Q96DE0 195 aaKnown RBP7.72□□□□□ -1.17
VPS33B-203ENST00000554264 TRAIPQ9BWF2 469 aa7.72□□□□□ -1.17
VPS33B-203ENST00000554264 POLR3AO14802 1390 aaPredicted RBP7.71□□□□□ -1.17
VPS33B-203ENST00000554264 PHRF1Q9P1Y6 1649 aaKnown RBP7.71□□□□□ -1.17
VPS33B-203ENST00000554264 OVOS2A0A0G2JMS6 1433 aa7.71□□□□□ -1.17
VPS33B-203ENST00000554264 OVOS2A0A0J9YW53 1432 aa7.71□□□□□ -1.17
VPS33B-203ENST00000554264 OVOS2Q6IE36 1432 aa7.71□□□□□ -1.17
VPS33B-203ENST00000554264 TCERG1O14776 1098 aaKnown RBP7.71□□□□□ -1.18
VPS33B-203ENST00000554264 SASH3O75995 380 aa7.71□□□□□ -1.18
VPS33B-203ENST00000554264 BRD1O95696 1058 aa7.71□□□□□ -1.18
VPS33B-203ENST00000554264 TARSP26639 723 aaKnown RBP7.71□□□□□ -1.18
VPS33B-203ENST00000554264 ADH6P28332 368 aa7.71□□□□□ -1.18
VPS33B-203ENST00000554264 FKBP4Q02790 459 aaKnown RBP eCLIP7.71□□□□□ -1.18
VPS33B-203ENST00000554264 NUTM2GQ5VZR2 741 aa7.71□□□□□ -1.18
VPS33B-203ENST00000554264 B4GALNT3Q6L9W6 998 aa7.71□□□□□ -1.18
VPS33B-203ENST00000554264 GOLGA6L1Q8N7Z2 621 aa7.71□□□□□ -1.18
VPS33B-203ENST00000554264 GPR152Q8TDT2 470 aa7.71□□□□□ -1.18
VPS33B-203ENST00000554264 BHMTQ93088 406 aa7.71□□□□□ -1.18
VPS33B-203ENST00000554264 CCDC136Q96JN2 1154 aa7.71□□□□□ -1.18
VPS33B-203ENST00000554264 IPO9Q96P70 1041 aaKnown RBP7.71□□□□□ -1.18
VPS33B-203ENST00000554264 AVENQ9NQS1 362 aaPredicted RBP7.71□□□□□ -1.18
VPS33B-203ENST00000554264 GDF2Q9UK05 429 aaPredicted RBP7.71□□□□□ -1.18
VPS33B-203ENST00000554264 MYBBP1AQ9BQG0 1328 aaKnown RBP7.71□□□□□ -1.18
VPS33B-203ENST00000554264 CAMTA1Q9Y6Y1 1673 aa7.7□□□□□ -1.18
VPS33B-203ENST00000554264 ITSN1Q15811 1721 aa7.7□□□□□ -1.18
VPS33B-203ENST00000554264 ICMTO60725 284 aa7.7□□□□□ -1.18
VPS33B-203ENST00000554264 EPXP11678 715 aa7.7□□□□□ -1.18
VPS33B-203ENST00000554264 EIF1AXP47813 144 aaKnown RBP7.7□□□□□ -1.18
VPS33B-203ENST00000554264 CCINQ13939 588 aa7.7□□□□□ -1.18
VPS33B-203ENST00000554264 SLCO4C1Q6ZQN7 724 aa7.7□□□□□ -1.18
VPS33B-203ENST00000554264 KRT25Q7Z3Z0 450 aa7.7□□□□□ -1.18
VPS33B-203ENST00000554264 ABTB2Q8N961 1025 aa7.7□□□□□ -1.18
VPS33B-203ENST00000554264 EDARADDQ8WWZ3 215 aa7.7□□□□□ -1.18
VPS33B-203ENST00000554264 ADAMTS8Q9UP79 889 aa7.7□□□□□ -1.18
VPS33B-203ENST00000554264 USP19O94966 1318 aa7.7□□□□□ -1.18
VPS33B-203ENST00000554264 ACEP12821 1306 aa7.7□□□□□ -1.18
VPS33B-203ENST00000554264 TRPM1Q7Z4N2 1603 aa7.7□□□□□ -1.18
VPS33B-203ENST00000554264 CRB1P82279 1406 aa7.69□□□□□ -1.18
VPS33B-203ENST00000554264 RGPD3A6NKT7 1758 aaPredicted RBP7.69□□□□□ -1.18
VPS33B-203ENST00000554264 RGPD4Q7Z3J3 1758 aa7.69□□□□□ -1.18
VPS33B-203ENST00000554264 NRKQ7Z2Y5 1582 aa7.69□□□□□ -1.18
VPS33B-203ENST00000554264 SIN3BO75182 1162 aa7.69□□□□□ -1.18
VPS33B-203ENST00000554264 XYLBO75191 536 aa7.69□□□□□ -1.18
VPS33B-203ENST00000554264 EGFRP00533 1210 aa7.69□□□□□ -1.18
VPS33B-203ENST00000554264 EPB42P16452 691 aa7.69□□□□□ -1.18
VPS33B-203ENST00000554264 HOXB4P17483 251 aaPredicted RBP7.69□□□□□ -1.18
VPS33B-203ENST00000554264 NFKB1P19838 968 aa7.69□□□□□ -1.18
VPS33B-203ENST00000554264 DDB1Q16531 1140 aa7.69□□□□□ -1.18
VPS33B-203ENST00000554264 NOM1Q5C9Z4 860 aaKnown RBP7.69□□□□□ -1.18
VPS33B-203ENST00000554264 NLRP13Q86W25 1043 aa7.69□□□□□ -1.18
VPS33B-203ENST00000554264 DCAF11Q8TEB1 546 aa7.69□□□□□ -1.18
VPS33B-203ENST00000554264 CDK19Q9BWU1 502 aa7.69□□□□□ -1.18
VPS33B-203ENST00000554264 LRRC4BQ9NT99 713 aa7.69□□□□□ -1.18
VPS33B-203ENST00000554264 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.69□□□□□ -1.18
VPS33B-203ENST00000554264 LMO7Q8WWI1 1683 aa7.69□□□□□ -1.18
VPS33B-203ENST00000554264 PARP4Q9UKK3 1724 aaKnown RBP7.69□□□□□ -1.18
VPS33B-203ENST00000554264 COL5A2P05997 1499 aaPredicted RBP7.68□□□□□ -1.18
VPS33B-203ENST00000554264 FZD6O60353 706 aa7.68□□□□□ -1.18
VPS33B-203ENST00000554264 GCP02774 474 aa7.68□□□□□ -1.18
VPS33B-203ENST00000554264 TMC1Q8TDI8 760 aa7.68□□□□□ -1.18
VPS33B-203ENST00000554264 EDEM1Q92611 657 aa7.68□□□□□ -1.18
VPS33B-203ENST00000554264 BTBD6Q96KE9 485 aa7.68□□□□□ -1.18
VPS33B-203ENST00000554264 GGNBP2Q9H3C7 697 aa7.68□□□□□ -1.18
VPS33B-203ENST00000554264 EGFL7Q9UHF1 273 aa7.68□□□□□ -1.18
VPS33B-203ENST00000554264 MTMR7Q9Y216 660 aa7.68□□□□□ -1.18
VPS33B-203ENST00000554264 BCL9O00512 1426 aa7.68□□□□□ -1.18
VPS33B-203ENST00000554264 ZBTB7AO95365 584 aa7.67□□□□□ -1.18
VPS33B-203ENST00000554264 PNISRQ8TF01 805 aaKnown RBP7.67□□□□□ -1.18
VPS33B-203ENST00000554264 PIK3R5Q8WYR1 880 aa7.67□□□□□ -1.18
VPS33B-203ENST00000554264 TNFRSF25Q93038 417 aa7.67□□□□□ -1.18
VPS33B-203ENST00000554264 SYT17Q9BSW7 474 aa7.67□□□□□ -1.18
VPS33B-203ENST00000554264 C11orf16Q9NQ32 467 aa7.67□□□□□ -1.18
VPS33B-203ENST00000554264 CCDC87Q9NVE4 849 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms