RNA–Protein interactions for RNA: ENST00000553866.1

CHGA-203, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 889 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-203ENST00000553866 HSPA8P11142 646 aaKnown RBP15.49■□□□□ 0.07
CHGA-203ENST00000553866 ZAP70P43403 619 aa15.49■□□□□ 0.07
CHGA-203ENST00000553866 MKRN3Q13064 507 aaKnown RBP15.49■□□□□ 0.07
CHGA-203ENST00000553866 TNFAIP1Q13829 316 aa15.49■□□□□ 0.07
CHGA-203ENST00000553866 MAP3K11Q16584 847 aa15.49■□□□□ 0.07
CHGA-203ENST00000553866 ARMC9Q7Z3E5 817 aa15.49■□□□□ 0.07
CHGA-203ENST00000553866 ZFPM1Q8IX07 1006 aa15.49■□□□□ 0.07
CHGA-203ENST00000553866 USP40Q9NVE5 1235 aa15.49■□□□□ 0.07
CHGA-203ENST00000553866 OTOFQ9HC10 1997 aa15.49■□□□□ 0.07
CHGA-203ENST00000553866 LBX1P52954 281 aa15.48■□□□□ 0.07
CHGA-203ENST00000553866 SUPT20HL1Q3ZLR7 823 aa15.48■□□□□ 0.07
CHGA-203ENST00000553866 CCDC158Q5M9N0 1113 aa15.48■□□□□ 0.07
CHGA-203ENST00000553866 ERICH6Q7L0X2 663 aa15.48■□□□□ 0.07
CHGA-203ENST00000553866 AACSQ86V21 672 aa15.48■□□□□ 0.07
CHGA-203ENST00000553866 DZIP1Q86YF9 867 aaKnown RBP15.48■□□□□ 0.07
CHGA-203ENST00000553866 ZGPATQ8N5A5 531 aaKnown RBP15.48■□□□□ 0.07
CHGA-203ENST00000553866 AIDAQ96BJ3 306 aa15.48■□□□□ 0.07
CHGA-203ENST00000553866 NSUN4Q96CB9 384 aaKnown RBP15.48■□□□□ 0.07
CHGA-203ENST00000553866 FAM163AQ96GL9 167 aaPredicted RBP15.48■□□□□ 0.07
CHGA-203ENST00000553866 CSRNP1Q96S65 589 aa15.48■□□□□ 0.07
CHGA-203ENST00000553866 FAM198AQ9UFP1 575 aa15.48■□□□□ 0.07
CHGA-203ENST00000553866 TNNI2P48788 182 aa15.47■□□□□ 0.07
CHGA-203ENST00000553866 TCP10Q12799 353 aa15.47■□□□□ 0.07
CHGA-203ENST00000553866 SPTY2D1Q68D10 685 aaPredicted RBP15.47■□□□□ 0.07
CHGA-203ENST00000553866 FAM83AQ86UY5 434 aa15.47■□□□□ 0.07
CHGA-203ENST00000553866 ERC1Q8IUD2 1116 aa15.47■□□□□ 0.07
CHGA-203ENST00000553866 BCL11AQ9H165 835 aa15.47■□□□□ 0.07
CHGA-203ENST00000553866 CHMP4BQ9H444 224 aaKnown RBP15.47■□□□□ 0.07
CHGA-203ENST00000553866 PIH1D3Q9NQM4 214 aaKnown RBP15.47■□□□□ 0.07
CHGA-203ENST00000553866 MROH7-TTC4A0A0A0MT08 1334 aa15.46■□□□□ 0.07
CHGA-203ENST00000553866 PPP1R12BO60237 982 aaPredicted RBP15.46■□□□□ 0.07
CHGA-203ENST00000553866 HMMRO75330 724 aa15.46■□□□□ 0.07
CHGA-203ENST00000553866 GJA5P36382 358 aa15.46■□□□□ 0.07
CHGA-203ENST00000553866 BTDP43251 543 aa15.46■□□□□ 0.07
CHGA-203ENST00000553866 CTCFP49711 727 aaPredicted RBP15.46■□□□□ 0.07
CHGA-203ENST00000553866 HSP90AB4PQ58FF6 505 aa15.46■□□□□ 0.07
CHGA-203ENST00000553866 FKBP1CQ5VVH2 108 aa15.46■□□□□ 0.07
CHGA-203ENST00000553866 ZNF512BQ96KM6 892 aaPredicted RBP15.46■□□□□ 0.07
CHGA-203ENST00000553866 CRBNQ96SW2 442 aa15.46■□□□□ 0.07
CHGA-203ENST00000553866 DDX4Q9NQI0 724 aaKnown RBP15.46■□□□□ 0.07
CHGA-203ENST00000553866 TMOD2Q9NZR1 351 aa15.46■□□□□ 0.07
CHGA-203ENST00000553866 RAI14Q9P0K7 980 aa15.46■□□□□ 0.07
CHGA-203ENST00000553866 PCDHB15Q9Y5E8 787 aa15.46■□□□□ 0.07
CHGA-203ENST00000553866 RFX7Q2KHR2 1363 aa15.46■□□□□ 0.07
CHGA-203ENST00000553866 SMARCA5O60264 1052 aaPredicted RBP15.45■□□□□ 0.06
CHGA-203ENST00000553866 SLURP2P0DP57 97 aa15.45■□□□□ 0.06
CHGA-203ENST00000553866 RHBDL3P58872 404 aa15.45■□□□□ 0.06
CHGA-203ENST00000553866 FAM151AQ8WW52 585 aa15.45■□□□□ 0.06
CHGA-203ENST00000553866 KIF1BPQ96EK5 621 aa15.45■□□□□ 0.06
CHGA-203ENST00000553866 ANTXR1Q9H6X2 564 aa15.45■□□□□ 0.06
CHGA-203ENST00000553866 GPR75-ASB3A0A0A6YYF3 556 aa15.44■□□□□ 0.06
CHGA-203ENST00000553866 RAB11FIP3O75154 756 aa15.44■□□□□ 0.06
CHGA-203ENST00000553866 WDHD1O75717 1129 aaPredicted RBP15.44■□□□□ 0.06
CHGA-203ENST00000553866 RGS3P49796 1198 aa15.44■□□□□ 0.06
CHGA-203ENST00000553866 SPRYD7Q5W111 196 aa15.44■□□□□ 0.06
CHGA-203ENST00000553866 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.44■□□□□ 0.06
CHGA-203ENST00000553866 SH3BP5LQ7L8J4 393 aa15.44■□□□□ 0.06
CHGA-203ENST00000553866 ADGRA1Q86SQ6 560 aa15.44■□□□□ 0.06
CHGA-203ENST00000553866 CNKSR2Q8WXI2 1034 aa15.44■□□□□ 0.06
CHGA-203ENST00000553866 SLC10A4Q96EP9 437 aa15.44■□□□□ 0.06
CHGA-203ENST00000553866 LRP2BPQ9P2M1 347 aa15.44■□□□□ 0.06
CHGA-203ENST00000553866 IREB2P48200 963 aaKnown RBP15.43■□□□□ 0.06
CHGA-203ENST00000553866 MIGA2Q7L4E1 593 aa15.43■□□□□ 0.06
CHGA-203ENST00000553866 CLASRPQ8N2M8 674 aaKnown RBP15.43■□□□□ 0.06
CHGA-203ENST00000553866 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.43■□□□□ 0.06
CHGA-203ENST00000553866 WNK4Q96J92 1243 aa15.43■□□□□ 0.06
CHGA-203ENST00000553866 BEGAINQ9BUH8 593 aa15.43■□□□□ 0.06
CHGA-203ENST00000553866 IDI2Q9BXS1 227 aa15.43■□□□□ 0.06
CHGA-203ENST00000553866 ELP3Q9H9T3 547 aa15.43■□□□□ 0.06
CHGA-203ENST00000553866 RNF186Q9NXI6 227 aa15.43■□□□□ 0.06
CHGA-203ENST00000553866 RPAP1Q9BWH6 1393 aaPredicted RBP15.43■□□□□ 0.06
CHGA-203ENST00000553866 MAST2Q6P0Q8 1798 aa15.43■□□□□ 0.06
CHGA-203ENST00000553866 AK9Q5TCS8 1911 aa15.43■□□□□ 0.06
CHGA-203ENST00000553866 TRPA1O75762 1119 aa15.42■□□□□ 0.06
CHGA-203ENST00000553866 PICALMQ13492 652 aa15.42■□□□□ 0.06
CHGA-203ENST00000553866 ANKRD13AQ8IZ07 590 aa15.42■□□□□ 0.06
CHGA-203ENST00000553866 PRDM10Q9NQV6 1147 aa15.42■□□□□ 0.06
CHGA-203ENST00000553866 DOCK2Q92608 1830 aa15.41■□□□□ 0.06
CHGA-203ENST00000553866 ATRNL1Q5VV63 1379 aa15.41■□□□□ 0.06
CHGA-203ENST00000553866 DDTLA6NHG4 134 aaPredicted RBP15.41■□□□□ 0.06
CHGA-203ENST00000553866 VGLL4Q14135 290 aa15.41■□□□□ 0.06
CHGA-203ENST00000553866 NAA16Q6N069 864 aaPredicted RBP15.41■□□□□ 0.06
CHGA-203ENST00000553866 SLF2Q8IX21 1173 aa15.41■□□□□ 0.06
CHGA-203ENST00000553866 SH3RF3Q8TEJ3 882 aaPredicted RBP15.41■□□□□ 0.06
CHGA-203ENST00000553866 ZKSCAN4Q969J2 545 aaPredicted RBP15.41■□□□□ 0.06
CHGA-203ENST00000553866 EDC3Q96F86 508 aaKnown RBP15.41■□□□□ 0.06
CHGA-203ENST00000553866 DCTPP1Q9H773 170 aa15.41■□□□□ 0.06
CHGA-203ENST00000553866 LAMB1P07942 1786 aa15.4■□□□□ 0.06
CHGA-203ENST00000553866 ENTPD3O75355 529 aa15.4■□□□□ 0.06
CHGA-203ENST00000553866 LDHCP07864 332 aa15.4■□□□□ 0.06
CHGA-203ENST00000553866 IFIT2P09913 472 aaKnown RBP15.4■□□□□ 0.06
CHGA-203ENST00000553866 INPP5BP32019 993 aa15.4■□□□□ 0.06
CHGA-203ENST00000553866 TM4SF4P48230 202 aa15.4■□□□□ 0.06
CHGA-203ENST00000553866 GSTO1P78417 241 aa15.4■□□□□ 0.06
CHGA-203ENST00000553866 MAP3K9P80192 1104 aa15.4■□□□□ 0.06
CHGA-203ENST00000553866 WRNIP1Q96S55 665 aa15.4■□□□□ 0.06
CHGA-203ENST00000553866 SNCAIPQ9Y6H5 919 aa15.4■□□□□ 0.06
CHGA-203ENST00000553866 CASP8AP2Q9UKL3 1982 aa15.4■□□□□ 0.06
CHGA-203ENST00000553866 CDK5RAP2Q96SN8 1893 aa15.4■□□□□ 0.06
CHGA-203ENST00000553866 UNCXA6NJT0 531 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms