RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 FXR1P51114 621 aaKnown RBP eCLIP22.21■■□□□ 1.15
SYNE2-211ENST00000553801 C17orf99Q6UX52 265 aa22.21■■□□□ 1.15
SYNE2-211ENST00000553801 MIGA2Q7L4E1 593 aa22.21■■□□□ 1.15
SYNE2-211ENST00000553801 ANKRD23Q86SG2 305 aa22.21■■□□□ 1.15
SYNE2-211ENST00000553801 FAM151AQ8WW52 585 aa22.21■■□□□ 1.15
SYNE2-211ENST00000553801 SLC5A1P13866 664 aa22.2■■□□□ 1.14
SYNE2-211ENST00000553801 FGFR2P21802 821 aa22.2■■□□□ 1.14
SYNE2-211ENST00000553801 ZEB1P37275 1124 aaPredicted RBP22.2■■□□□ 1.14
SYNE2-211ENST00000553801 KLHDC4Q8TBB5 520 aa22.2■■□□□ 1.14
SYNE2-211ENST00000553801 COLQQ9Y215 455 aaPredicted RBP22.2■■□□□ 1.14
SYNE2-211ENST00000553801 PTPRCP08575 1304 aa22.2■■□□□ 1.14
SYNE2-211ENST00000553801 INPP5BP32019 993 aa22.19■■□□□ 1.14
SYNE2-211ENST00000553801 MRPL50Q8N5N7 158 aaKnown RBP22.19■■□□□ 1.14
SYNE2-211ENST00000553801 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.19■■□□□ 1.14
SYNE2-211ENST00000553801 AK9Q5TCS8 1911 aa22.18■■□□□ 1.14
SYNE2-211ENST00000553801 PSMC4P43686 418 aa22.18■■□□□ 1.14
SYNE2-211ENST00000553801 FAM9BQ8IZU0 186 aa22.18■■□□□ 1.14
SYNE2-211ENST00000553801 LPIN2Q92539 896 aa22.18■■□□□ 1.14
SYNE2-211ENST00000553801 SRRDQ9UH36 339 aa22.18■■□□□ 1.14
SYNE2-211ENST00000553801 CPA4Q9UI42 421 aa22.18■■□□□ 1.14
SYNE2-211ENST00000553801 ZNF112Q9UJU3 913 aa22.18■■□□□ 1.14
SYNE2-211ENST00000553801 KCNH4Q9UQ05 1017 aa22.18■■□□□ 1.14
SYNE2-211ENST00000553801 CEP290O15078 2479 aa22.18■■□□□ 1.14
SYNE2-211ENST00000553801 EYA2O00167 538 aa22.17■■□□□ 1.14
SYNE2-211ENST00000553801 PDHXO00330 501 aa22.17■■□□□ 1.14
SYNE2-211ENST00000553801 NKX2-3Q8TAU0 364 aa22.17■■□□□ 1.14
SYNE2-211ENST00000553801 RAET1EQ8TD07 263 aa22.17■■□□□ 1.14
SYNE2-211ENST00000553801 USP44Q9H0E7 712 aa22.17■■□□□ 1.14
SYNE2-211ENST00000553801 FMNL1O95466 1100 aaPredicted RBP22.16■■□□□ 1.14
SYNE2-211ENST00000553801 TCP10Q12799 353 aa22.16■■□□□ 1.14
SYNE2-211ENST00000553801 DAGLAQ9Y4D2 1042 aa22.16■■□□□ 1.14
SYNE2-211ENST00000553801 BRCA2P51587 3418 aa22.16■■□□□ 1.14
SYNE2-211ENST00000553801 ZSWIM8A7E2V4 1837 aa22.15■■□□□ 1.14
SYNE2-211ENST00000553801 H0YGN5 161 aa22.15■■□□□ 1.14
SYNE2-211ENST00000553801 ECM2O94769 699 aaPredicted RBP22.15■■□□□ 1.14
SYNE2-211ENST00000553801 NOL9Q5SY16 702 aaKnown RBP22.15■■□□□ 1.14
SYNE2-211ENST00000553801 CDC42EP5Q6NZY7 148 aa22.15■■□□□ 1.14
SYNE2-211ENST00000553801 TRIM47Q96LD4 638 aa22.15■■□□□ 1.14
SYNE2-211ENST00000553801 GNL3LQ9NVN8 582 aaKnown RBP22.15■■□□□ 1.14
SYNE2-211ENST00000553801 MYH13Q9UKX3 1938 aa22.15■■□□□ 1.14
SYNE2-211ENST00000553801 OSBPP22059 807 aa22.14■■□□□ 1.13
SYNE2-211ENST00000553801 GRK4P32298 578 aa22.14■■□□□ 1.13
SYNE2-211ENST00000553801 PARK7Q99497 189 aaKnown RBP22.14■■□□□ 1.13
SYNE2-211ENST00000553801 CXCL11O14625 94 aa22.13■■□□□ 1.13
SYNE2-211ENST00000553801 LDHBP07195 334 aaKnown RBP22.13■■□□□ 1.13
SYNE2-211ENST00000553801 CTGFP29279 349 aa22.13■■□□□ 1.13
SYNE2-211ENST00000553801 RFX5P48382 616 aaPredicted RBP22.13■■□□□ 1.13
SYNE2-211ENST00000553801 MTFR1Q15390 333 aa22.13■■□□□ 1.13
SYNE2-211ENST00000553801 DPF3Q92784 378 aa22.13■■□□□ 1.13
SYNE2-211ENST00000553801 FBXO3Q9UK99 471 aa22.13■■□□□ 1.13
SYNE2-211ENST00000553801 MYPNQ86TC9 1320 aa22.12■■□□□ 1.13
SYNE2-211ENST00000553801 ADGRA2Q96PE1 1338 aa22.12■■□□□ 1.13
SYNE2-211ENST00000553801 UBXN2AP68543 259 aa22.12■■□□□ 1.13
SYNE2-211ENST00000553801 DIXDC1Q155Q3 683 aa22.12■■□□□ 1.13
SYNE2-211ENST00000553801 USP40Q9NVE5 1235 aa22.12■■□□□ 1.13
SYNE2-211ENST00000553801 BIN2Q9UBW5 565 aaPredicted RBP22.12■■□□□ 1.13
SYNE2-211ENST00000553801 TRIOBPQ9H2D6 2365 aa22.12■■□□□ 1.13
SYNE2-211ENST00000553801 ZNF521Q96K83 1311 aa22.11■■□□□ 1.13
SYNE2-211ENST00000553801 GJB1P08034 283 aa22.11■■□□□ 1.13
SYNE2-211ENST00000553801 PRDX5P30044 214 aa22.11■■□□□ 1.13
SYNE2-211ENST00000553801 FCGRTP55899 365 aa22.11■■□□□ 1.13
SYNE2-211ENST00000553801 NFIAQ12857 509 aa22.11■■□□□ 1.13
SYNE2-211ENST00000553801 SSH1Q8WYL5 1049 aa22.11■■□□□ 1.13
SYNE2-211ENST00000553801 CEP126Q9P2H0 1117 aa22.11■■□□□ 1.13
SYNE2-211ENST00000553801 GJA8P48165 433 aa22.1■■□□□ 1.13
SYNE2-211ENST00000553801 MOGSQ13724 837 aa22.1■■□□□ 1.13
SYNE2-211ENST00000553801 ATP2B3Q16720 1220 aa22.1■■□□□ 1.13
SYNE2-211ENST00000553801 FASTKD5Q7L8L6 764 aaKnown RBP22.1■■□□□ 1.13
SYNE2-211ENST00000553801 ATG9AQ7Z3C6 839 aa22.1■■□□□ 1.13
SYNE2-211ENST00000553801 SHISA4Q96DD7 197 aa22.1■■□□□ 1.13
SYNE2-211ENST00000553801 HTATIP2Q9BUP3 242 aa22.1■■□□□ 1.13
SYNE2-211ENST00000553801 FAM198AQ9UFP1 575 aa22.1■■□□□ 1.13
SYNE2-211ENST00000553801 DENND2AQ9ULE3 1009 aa22.1■■□□□ 1.13
SYNE2-211ENST00000553801 SALL1Q9NSC2 1324 aa22.09■■□□□ 1.13
SYNE2-211ENST00000553801 E9PSI1 815 aa22.09■■□□□ 1.13
SYNE2-211ENST00000553801 SEMA3EO15041 775 aa22.09■■□□□ 1.13
SYNE2-211ENST00000553801 CIAO1O76071 339 aa22.09■■□□□ 1.13
SYNE2-211ENST00000553801 CCL5P13501 91 aa22.09■■□□□ 1.13
SYNE2-211ENST00000553801 RNF208Q9H0X6 261 aa22.09■■□□□ 1.13
SYNE2-211ENST00000553801 PICK1Q9NRD5 415 aa22.09■■□□□ 1.13
SYNE2-211ENST00000553801 BCRP11274 1271 aa22.08■■□□□ 1.13
SYNE2-211ENST00000553801 GPAT2Q6NUI2 795 aa22.08■■□□□ 1.13
SYNE2-211ENST00000553801 CHRDL2Q6WN34 429 aa22.08■■□□□ 1.13
SYNE2-211ENST00000553801 ZGPATQ8N5A5 531 aaKnown RBP22.08■■□□□ 1.13
SYNE2-211ENST00000553801 SLAIN1Q8ND83 568 aa22.08■■□□□ 1.13
SYNE2-211ENST00000553801 ENTPD3O75355 529 aa22.07■■□□□ 1.12
SYNE2-211ENST00000553801 SCYL3Q8IZE3 742 aa22.07■■□□□ 1.12
SYNE2-211ENST00000553801 SIL1Q9H173 461 aa22.07■■□□□ 1.12
SYNE2-211ENST00000553801 HDAC5Q9UQL6 1122 aa22.07■■□□□ 1.12
SYNE2-211ENST00000553801 ZHX2Q9Y6X8 837 aa22.07■■□□□ 1.12
SYNE2-211ENST00000553801 UBTFL1P0CB47 393 aaPredicted RBP22.06■■□□□ 1.12
SYNE2-211ENST00000553801 CYP2C8P10632 490 aa22.06■■□□□ 1.12
SYNE2-211ENST00000553801 PRKCZQ05513 592 aa22.06■■□□□ 1.12
SYNE2-211ENST00000553801 ALDH1L2Q3SY69 923 aa22.06■■□□□ 1.12
SYNE2-211ENST00000553801 SLF2Q8IX21 1173 aa22.06■■□□□ 1.12
SYNE2-211ENST00000553801 IDI2Q9BXS1 227 aa22.06■■□□□ 1.12
SYNE2-211ENST00000553801 NR2E3Q9Y5X4 410 aa22.06■■□□□ 1.12
SYNE2-211ENST00000553801 A0A0G2JLL6 359 aaPredicted RBP22.05■■□□□ 1.12
SYNE2-211ENST00000553801 PHF20L1A8MW92 1017 aa22.05■■□□□ 1.12
SYNE2-211ENST00000553801 ZBTB22O15209 634 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms