RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 BCORQ6W2J9 1755 aa7.22□□□□□ -1.25
VIPAS39-204ENST00000553576 MYO5AQ9Y4I1 1855 aaKnown RBP7.21□□□□□ -1.25
VIPAS39-204ENST00000553576 ZNF609O15014 1411 aa7.21□□□□□ -1.25
VIPAS39-204ENST00000553576 TAF5LO75529 589 aa7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 BAG4O95429 457 aaKnown RBP7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 ADAMTS2O95450 1211 aa7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 ZKSCAN1P17029 563 aaPredicted RBP7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 PSMA5P28066 241 aa7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 TIMM10P62072 90 aa7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 IFIT5Q13325 482 aaKnown RBP7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 NNTQ13423 1086 aa7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 MCMDC2Q4G0Z9 681 aa7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 LRRC24Q50LG9 513 aa7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 RNF20Q5VTR2 975 aa7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 FAM89AQ96GI7 184 aa7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 ZNF512BQ96KM6 892 aaPredicted RBP7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 ZSCAN31Q96LW9 406 aaPredicted RBP7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 FAM227BQ96M60 508 aa7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 FSD1Q9BTV5 496 aa7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 HELLSQ9NRZ9 838 aa7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 ISY1Q9ULR0 285 aaKnown RBP7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 LIMCH1Q9UPQ0 1083 aa7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 ZDHHC9Q9Y397 364 aa7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 RBM8AQ9Y5S9 174 aaKnown RBP7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 SBF2Q86WG5 1849 aa7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 BCL9LQ86UU0 1499 aa7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 SH3TC1Q8TE82 1336 aa7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 DDX60Q8IY21 1712 aaKnown RBP7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 ARAP2Q8WZ64 1704 aa7.21□□□□□ -1.26
VIPAS39-204ENST00000553576 RPAP1Q9BWH6 1393 aaPredicted RBP7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 CASZ1Q86V15 1759 aa7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 LOC102724428A0A0B4J2F2 783 aa7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 A0A0D9SFI3 127 aa7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 GOLGA6L22H0YM25 854 aa7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 BRD1O95696 1058 aa7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 HSP90B1P14625 803 aaKnown RBP7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 TIMP2P16035 220 aa7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 SSFA2P28290 1259 aa7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 SIK1P57059 783 aa7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 GUCA2AQ02747 115 aa7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 PARP10Q53GL7 1025 aa7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 CREB3L3Q68CJ9 461 aa7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 CLEC4GQ6UXB4 293 aa7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 RUFY3Q7L099 469 aa7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 DZIP3Q86Y13 1208 aaKnown RBP7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 ZGPATQ8N5A5 531 aaKnown RBP7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 SYMPKQ92797 1274 aaKnown RBP7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 ZNF594Q96JF6 807 aaPredicted RBP7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 SH2B1Q9NRF2 756 aaPredicted RBP7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 CCDC87Q9NVE4 849 aa7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 CHMP3Q9Y3E7 222 aa7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 CYP46A1Q9Y6A2 500 aa7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 TAF1LQ8IZX4 1826 aa7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 RTL9Q8NET4 1388 aa7.2□□□□□ -1.26
VIPAS39-204ENST00000553576 A0A1B0GUL7 405 aa7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 ANKRD18BA2A2Z9 1011 aa7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 IRS4O14654 1257 aaPredicted RBP7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 SLC27A2O14975 620 aa7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 CAMTA2O94983 1202 aa7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 ZFYP08048 801 aaPredicted RBP7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 CRKLP46109 303 aaKnown RBP7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 AK2P54819 239 aa7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 CTSWP56202 376 aa7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 KRT32Q14532 448 aa7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 LRRFIP1Q32MZ4 808 aaKnown RBP7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 ZMYM1Q5SVZ6 1142 aa7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 SMYD5Q6GMV2 418 aa7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 PRPF40BQ6NWY9 871 aaKnown RBP7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 XAGE2Q96GT9 111 aa7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 NEUROD6Q96NK8 337 aa7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 DSCC1Q9BVC3 393 aa7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 PUS3Q9BZE2 481 aaKnown RBP7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 PAG1Q9NWQ8 432 aa7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 TRMT112Q9UI30 125 aaKnown RBP7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 SPATA31A6Q5VVP1 1343 aa7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 THSD7AQ9UPZ6 1657 aa7.19□□□□□ -1.26
VIPAS39-204ENST00000553576 LY75O60449 1722 aa7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 DOCK2Q92608 1830 aa7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 FSD2A1L4K1 749 aa7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 NUTM2BA6NNL0 878 aaPredicted RBP7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 NUTM2EB1AL46 878 aaPredicted RBP7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 RNF225M0QZC1 329 aaPredicted RBP7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 RNF113AO15541 343 aaKnown RBP7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 ADH1CP00326 375 aa7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 IFIT1P09914 478 aaKnown RBP7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 CASTP20810 708 aaKnown RBP7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 ITGA6P23229 1130 aa7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 WDR4P57081 412 aaKnown RBP7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 ITPK1Q13572 414 aa7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 ANKRD1Q15327 319 aa7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 KLHL40Q2TBA0 621 aa7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 ADCK5Q3MIX3 580 aa7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 CCDC158Q5M9N0 1113 aa7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 LDHAL6AQ6ZMR3 332 aa7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 ZNF589Q86UQ0 364 aaPredicted RBP7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 RETREG3Q86VR2 466 aa7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 NUTM2AQ8IVF1 878 aaPredicted RBP7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 VGLL2Q8N8G2 317 aa7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 SYTL4Q96C24 671 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms