RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 ZC3H13Q5T200 1668 aaKnown RBP6.89□□□□□ -1.31
ATXN3-222ENST00000553570 KDM5DQ9BY66 1539 aa6.88□□□□□ -1.31
ATXN3-222ENST00000553570 ERBINQ96RT1 1412 aa6.88□□□□□ -1.31
ATXN3-222ENST00000553570 NUP155O75694 1391 aa6.88□□□□□ -1.31
ATXN3-222ENST00000553570 ANKRD33BA6NCL7 494 aa6.88□□□□□ -1.31
ATXN3-222ENST00000553570 EREGO14944 169 aa6.88□□□□□ -1.31
ATXN3-222ENST00000553570 NRG1Q02297 640 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-222ENST00000553570 EHHADHQ08426 723 aa6.88□□□□□ -1.31
ATXN3-222ENST00000553570 AAMPQ13685 434 aa6.88□□□□□ -1.31
ATXN3-222ENST00000553570 RSPO4Q2I0M5 234 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-222ENST00000553570 IGF2-ASQ6U949 168 aa6.88□□□□□ -1.31
ATXN3-222ENST00000553570 PMEPA1Q969W9 287 aa6.88□□□□□ -1.31
ATXN3-222ENST00000553570 SSBP4Q9BWG4 385 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-222ENST00000553570 ADAM19Q9H013 955 aa6.88□□□□□ -1.31
ATXN3-222ENST00000553570 STRCQ7RTU9 1775 aa6.87□□□□□ -1.31
ATXN3-222ENST00000553570 GCC2Q8IWJ2 1684 aa6.87□□□□□ -1.31
ATXN3-222ENST00000553570 RRBP1Q9P2E9 1410 aaKnown RBP6.87□□□□□ -1.31
ATXN3-222ENST00000553570 TNRQ92752 1358 aa6.87□□□□□ -1.31
ATXN3-222ENST00000553570 TRPA1O75762 1119 aa6.87□□□□□ -1.31
ATXN3-222ENST00000553570 SMNDC1O75940 238 aaKnown RBP eCLIP6.87□□□□□ -1.31
ATXN3-222ENST00000553570 IGHA2P01877 340 aa6.87□□□□□ -1.31
ATXN3-222ENST00000553570 ERCC3P19447 782 aa6.87□□□□□ -1.31
ATXN3-222ENST00000553570 GALNT11Q8NCW6 608 aa6.87□□□□□ -1.31
ATXN3-222ENST00000553570 SNX29Q8TEQ0 813 aa6.87□□□□□ -1.31
ATXN3-222ENST00000553570 ASB16Q96NS5 453 aa6.87□□□□□ -1.31
ATXN3-222ENST00000553570 HHIPQ96QV1 700 aa6.87□□□□□ -1.31
ATXN3-222ENST00000553570 LACRTQ9GZZ8 138 aa6.87□□□□□ -1.31
ATXN3-222ENST00000553570 SRA1Q9HD15 236 aaKnown RBP6.87□□□□□ -1.31
ATXN3-222ENST00000553570 AMOTL2Q9Y2J4 779 aa6.87□□□□□ -1.31
ATXN3-222ENST00000553570 PPME1Q9Y570 386 aa6.87□□□□□ -1.31
ATXN3-222ENST00000553570 MYO3AQ8NEV4 1616 aa6.87□□□□□ -1.31
ATXN3-222ENST00000553570 ABCC3O15438 1527 aa6.86□□□□□ -1.31
ATXN3-222ENST00000553570 ADGRL2O95490 1459 aa6.86□□□□□ -1.31
ATXN3-222ENST00000553570 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.86□□□□□ -1.31
ATXN3-222ENST00000553570 KIF1BO60333 1816 aa6.86□□□□□ -1.31
ATXN3-222ENST00000553570 LINC01387J3KSC0 135 aa6.86□□□□□ -1.31
ATXN3-222ENST00000553570 K7ELQ4 463 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-222ENST00000553570 EPHA1P21709 976 aa6.86□□□□□ -1.31
ATXN3-222ENST00000553570 CDC27P30260 824 aa6.86□□□□□ -1.31
ATXN3-222ENST00000553570 PEAR1Q5VY43 1037 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-222ENST00000553570 TXNRD3Q86VQ6 643 aa6.86□□□□□ -1.31
ATXN3-222ENST00000553570 NPAS4Q8IUM7 802 aa6.86□□□□□ -1.31
ATXN3-222ENST00000553570 THEMISQ8N1K5 641 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-222ENST00000553570 FAM129BQ96TA1 746 aa6.86□□□□□ -1.31
ATXN3-222ENST00000553570 RBCK1Q9BYM8 510 aa6.86□□□□□ -1.31
ATXN3-222ENST00000553570 MUC3BQ9H195 1237 aa6.86□□□□□ -1.31
ATXN3-222ENST00000553570 ZFYVE28Q9HCC9 887 aa6.86□□□□□ -1.31
ATXN3-222ENST00000553570 SH2B1Q9NRF2 756 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-222ENST00000553570 BRPF3Q9ULD4 1205 aa6.86□□□□□ -1.31
ATXN3-222ENST00000553570 DEPDC5O75140 1603 aa6.86□□□□□ -1.31
ATXN3-222ENST00000553570 MROH1Q8NDA8 1641 aa6.86□□□□□ -1.31
ATXN3-222ENST00000553570 LMTK3Q96Q04 1460 aa6.85□□□□□ -1.31
ATXN3-222ENST00000553570 ROCK1Q13464 1354 aa6.85□□□□□ -1.31
ATXN3-222ENST00000553570 POLR1AO95602 1720 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-222ENST00000553570 E9PCH4 1651 aa6.85□□□□□ -1.31
ATXN3-222ENST00000553570 NDUFB5O43674 189 aa6.85□□□□□ -1.31
ATXN3-222ENST00000553570 PHACTR2O75167 634 aa6.85□□□□□ -1.31
ATXN3-222ENST00000553570 NOS3P29474 1203 aa6.85□□□□□ -1.31
ATXN3-222ENST00000553570 TMC7Q7Z402 723 aa6.85□□□□□ -1.31
ATXN3-222ENST00000553570 MAP4K3Q8IVH8 894 aa6.85□□□□□ -1.31
ATXN3-222ENST00000553570 TMEM130Q8N3G9 435 aa6.85□□□□□ -1.31
ATXN3-222ENST00000553570 TMEM102Q8N9M5 508 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-222ENST00000553570 TTC16Q8NEE8 873 aa6.85□□□□□ -1.31
ATXN3-222ENST00000553570 WFDC12Q8WWY7 111 aa6.85□□□□□ -1.31
ATXN3-222ENST00000553570 ZKSCAN3Q9BRR0 538 aa6.85□□□□□ -1.31
ATXN3-222ENST00000553570 TET3O43151 1660 aa6.84□□□□□ -1.31
ATXN3-222ENST00000553570 PDE2AO00408 941 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-222ENST00000553570 TXNDC11Q6PKC3 985 aa6.84□□□□□ -1.31
ATXN3-222ENST00000553570 ANKLE2Q86XL3 938 aa6.84□□□□□ -1.31
ATXN3-222ENST00000553570 ZSCAN29Q8IWY8 852 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-222ENST00000553570 NXPE3Q969Y0 559 aa6.84□□□□□ -1.31
ATXN3-222ENST00000553570 OSMRQ99650 979 aa6.84□□□□□ -1.31
ATXN3-222ENST00000553570 USP21Q9UK80 565 aa6.84□□□□□ -1.31
ATXN3-222ENST00000553570 PZPP20742 1482 aa6.84□□□□□ -1.31
ATXN3-222ENST00000553570 NPATQ14207 1427 aa6.84□□□□□ -1.32
ATXN3-222ENST00000553570 PIK3C2BO00750 1634 aa6.83□□□□□ -1.32
ATXN3-222ENST00000553570 UNC13BO14795 1591 aa6.83□□□□□ -1.32
ATXN3-222ENST00000553570 CEP170BQ9Y4F5 1589 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-222ENST00000553570 PTPRAP18433 802 aa6.83□□□□□ -1.32
ATXN3-222ENST00000553570 RBM25P49756 843 aaKnown RBP6.83□□□□□ -1.32
ATXN3-222ENST00000553570 IDI1Q13907 227 aa6.83□□□□□ -1.32
ATXN3-222ENST00000553570 FOXD4L6Q3SYB3 417 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-222ENST00000553570 ZNF326Q5BKZ1 582 aaKnown RBP6.83□□□□□ -1.32
ATXN3-222ENST00000553570 FOXD4L3Q6VB84 417 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-222ENST00000553570 CITED4Q96RK1 184 aa6.83□□□□□ -1.32
ATXN3-222ENST00000553570 LATS2Q9NRM7 1088 aa6.83□□□□□ -1.32
ATXN3-222ENST00000553570 KCNK4Q9NYG8 393 aa6.83□□□□□ -1.32
ATXN3-222ENST00000553570 SOX13Q9UN79 622 aa6.83□□□□□ -1.32
ATXN3-222ENST00000553570 EID1Q9Y6B2 187 aa6.83□□□□□ -1.32
ATXN3-222ENST00000553570 SPHKAPQ2M3C7 1700 aa6.83□□□□□ -1.32
ATXN3-222ENST00000553570 UBR1Q8IWV7 1749 aa6.83□□□□□ -1.32
ATXN3-222ENST00000553570 ZNF142P52746 1687 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-222ENST00000553570 IQGAP3Q86VI3 1631 aa6.83□□□□□ -1.32
ATXN3-222ENST00000553570 UGGT1Q9NYU2 1555 aa6.82□□□□□ -1.32
ATXN3-222ENST00000553570 PRDM15P57071 1507 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-222ENST00000553570 RBM47A0AV96 593 aaKnown RBP6.82□□□□□ -1.32
ATXN3-222ENST00000553570 F8W735 103 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-222ENST00000553570 FSCN2O14926 492 aa6.82□□□□□ -1.32
ATXN3-222ENST00000553570 IREB2P48200 963 aaKnown RBP6.82□□□□□ -1.32
ATXN3-222ENST00000553570 Q6ZS46 218 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms