RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ZNF827Q17R98 1081 aa15.05■□□□□ -0
SHMT2-205ENST00000553474 CHST3Q7LGC8 479 aa15.05■□□□□ -0
SHMT2-205ENST00000553474 CNNM2Q9H8M5 875 aa15.05■□□□□ -0
SHMT2-205ENST00000553474 ORC3Q9UBD5 711 aaPredicted RBP15.05■□□□□ -0
SHMT2-205ENST00000553474 TIAM2Q8IVF5 1701 aa15.05■□□□□ -0
SHMT2-205ENST00000553474 TCRBV5S4A2TA0A5A2 114 aa15.04■□□□□ -0
SHMT2-205ENST00000553474 DYNC1I1O14576 645 aa15.04■□□□□ -0
SHMT2-205ENST00000553474 PDE6AP16499 860 aa15.04■□□□□ -0
SHMT2-205ENST00000553474 ME1P48163 572 aa15.04■□□□□ -0
SHMT2-205ENST00000553474 SNW1Q13573 536 aaKnown RBP15.04■□□□□ -0
SHMT2-205ENST00000553474 PI16Q6UXB8 463 aa15.04■□□□□ -0
SHMT2-205ENST00000553474 LUZP1Q86V48 1076 aa15.04■□□□□ -0
SHMT2-205ENST00000553474 SYNE4Q8N205 404 aa15.04■□□□□ -0
SHMT2-205ENST00000553474 MRPS27Q92552 414 aaKnown RBP15.04■□□□□ -0
SHMT2-205ENST00000553474 ANO10Q9NW15 660 aa15.04■□□□□ -0
SHMT2-205ENST00000553474 BCORQ6W2J9 1755 aa15.04■□□□□ -0
SHMT2-205ENST00000553474 RGL2O15211 777 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 AP5Z1O43299 807 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 IDH1O75874 414 aaKnown RBP15.03■□□□□ -0
SHMT2-205ENST00000553474 LIFRP42702 1097 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 CCDC152Q4G0S7 254 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 SGMS1Q86VZ5 419 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 PLA2G4DQ86XP0 818 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 SPATA5Q8NB90 893 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 LINC00301Q8NCQ3 95 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 KIAA1524Q8TCG1 905 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 AIDAQ96BJ3 306 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 UTP14AQ9BVJ6 771 aaKnown RBP15.03■□□□□ -0
SHMT2-205ENST00000553474 NAT10Q9H0A0 1025 aaKnown RBP15.03■□□□□ -0
SHMT2-205ENST00000553474 TFCP2L1Q9NZI6 479 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 ZNF532Q9HCE3 1301 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 PATL2C9JE40 543 aaKnown RBP15.03■□□□□ -0
SHMT2-205ENST00000553474 GOLGA6L19H0YKK7 550 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 SH2B2O14492 632 aaPredicted RBP15.03■□□□□ -0
SHMT2-205ENST00000553474 PHKA1P46020 1223 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 SYNE3Q6ZMZ3 975 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 MTERF4Q7Z6M4 381 aaKnown RBP15.03■□□□□ -0
SHMT2-205ENST00000553474 STRBPQ96SI9 672 aaKnown RBP15.03■□□□□ -0
SHMT2-205ENST00000553474 MAP7D2Q96T17 732 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 MPHOSPH8Q99549 860 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 TTC12Q9H892 705 aaPredicted RBP15.03■□□□□ -0
SHMT2-205ENST00000553474 PIH1D3Q9NQM4 214 aaKnown RBP15.03■□□□□ -0
SHMT2-205ENST00000553474 STK32BQ9NY57 414 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 RTCBQ9Y3I0 505 aaKnown RBP15.03■□□□□ -0
SHMT2-205ENST00000553474 NID2Q14112 1375 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 SCN7AQ01118 1682 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 QSER1Q2KHR3 1735 aa15.03■□□□□ -0
SHMT2-205ENST00000553474 RCAN1P53805 252 aa15.02□□□□□ -0.01
SHMT2-205ENST00000553474 RC3H1Q5TC82 1133 aaKnown RBP15.02□□□□□ -0.01
SHMT2-205ENST00000553474 MYSM1Q5VVJ2 828 aa15.02□□□□□ -0.01
SHMT2-205ENST00000553474 AMIGO3Q86WK7 504 aa15.02□□□□□ -0.01
SHMT2-205ENST00000553474 PNPLA7Q6ZV29 1317 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 STK36Q9NRP7 1315 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 METAP2P50579 478 aaKnown RBP eCLIP15.01□□□□□ -0.011e-6■■■□□ 16.1
SHMT2-205ENST00000553474 ZNF75DP51815 510 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 CEBPZQ03701 1054 aaKnown RBP15.01□□□□□ -0.01
SHMT2-205ENST00000553474 FMR1NBQ8N0W7 255 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-205ENST00000553474 FSIP1Q8NA03 581 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 MRFAP1L1Q96HT8 127 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 TRIM5Q9C035 493 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 KRT23Q9C075 422 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 NBPF3Q9H094 633 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 DNAJC25Q9H1X3 360 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 PCDHA7Q9UN72 937 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 NEMFO60524 1076 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 RPS6KA4O75676 772 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 APPP05067 770 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 IGHMBP2P38935 993 aaKnown RBP15.01□□□□□ -0.01
SHMT2-205ENST00000553474 IQCB1Q15051 598 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 STK38Q15208 465 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 SF3A1Q15459 793 aaKnown RBP15.01□□□□□ -0.01
SHMT2-205ENST00000553474 DNTTIP2Q5QJE6 756 aaKnown RBP15.01□□□□□ -0.01
SHMT2-205ENST00000553474 APOA5Q6Q788 366 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 CEP57L1Q8IYX8 460 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 JMYQ8N9B5 988 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 AKT1S1Q96B36 256 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 NACAP1Q9BZK3 213 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 ZNF652Q9Y2D9 606 aa15.01□□□□□ -0.01
SHMT2-205ENST00000553474 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15□□□□□ -0.01
SHMT2-205ENST00000553474 SPTLC2O15270 562 aa15□□□□□ -0.01
SHMT2-205ENST00000553474 HMGB2P26583 209 aaKnown RBP15□□□□□ -0.01
SHMT2-205ENST00000553474 KIF23Q02241 960 aaPredicted RBP15□□□□□ -0.01
SHMT2-205ENST00000553474 HSP90AA2PQ14568 343 aaPredicted RBP15□□□□□ -0.01
SHMT2-205ENST00000553474 CLEC4GQ6UXB4 293 aa15□□□□□ -0.01
SHMT2-205ENST00000553474 TBC1D10CQ8IV04 446 aa15□□□□□ -0.01
SHMT2-205ENST00000553474 WASF1Q92558 559 aa15□□□□□ -0.01
SHMT2-205ENST00000553474 CDC5LQ99459 802 aaKnown RBP15□□□□□ -0.01
SHMT2-205ENST00000553474 BPIFA3Q9BQP9 254 aa15□□□□□ -0.01
SHMT2-205ENST00000553474 GOLPH3LQ9H4A5 285 aa15□□□□□ -0.01
SHMT2-205ENST00000553474 UQCRHLA0A096LP55 91 aa14.99□□□□□ -0.01
SHMT2-205ENST00000553474 ZBTB43O43298 467 aa14.99□□□□□ -0.01
SHMT2-205ENST00000553474 CAMTA2O94983 1202 aa14.99□□□□□ -0.01
SHMT2-205ENST00000553474 UQCRHP07919 91 aa14.99□□□□□ -0.01
SHMT2-205ENST00000553474 GUCY1B3Q02153 619 aa14.99□□□□□ -0.01
SHMT2-205ENST00000553474 DHX8Q14562 1220 aaKnown RBP14.99□□□□□ -0.01
SHMT2-205ENST00000553474 SLC15A2Q16348 729 aa14.99□□□□□ -0.01
SHMT2-205ENST00000553474 SUSD4Q5VX71 490 aa14.99□□□□□ -0.01
SHMT2-205ENST00000553474 IFNL3Q8IZI9 196 aa14.99□□□□□ -0.01
SHMT2-205ENST00000553474 TMTC2Q8N394 836 aa14.99□□□□□ -0.01
SHMT2-205ENST00000553474 IGDCC4Q8TDY8 1250 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms