RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 EDC3Q96F86 508 aaKnown RBP11.77□□□□□ -0.53
TMEM260-204ENST00000553335 MAST3O60307 1309 aa11.77□□□□□ -0.53
TMEM260-204ENST00000553335 RFX7Q2KHR2 1363 aa11.77□□□□□ -0.53
TMEM260-204ENST00000553335 ZFYP08048 801 aaPredicted RBP11.76□□□□□ -0.53
TMEM260-204ENST00000553335 RPS12P25398 132 aaKnown RBP11.76□□□□□ -0.53
TMEM260-204ENST00000553335 GSTO1P78417 241 aa11.76□□□□□ -0.53
TMEM260-204ENST00000553335 CASC1Q6TDU7 716 aa11.76□□□□□ -0.53
TMEM260-204ENST00000553335 DZIP1Q86YF9 867 aaKnown RBP11.76□□□□□ -0.53
TMEM260-204ENST00000553335 GPC2Q8N158 579 aa11.76□□□□□ -0.53
TMEM260-204ENST00000553335 PIH1D3Q9NQM4 214 aaKnown RBP11.76□□□□□ -0.53
TMEM260-204ENST00000553335 HDAC9Q9UKV0 1011 aa11.76□□□□□ -0.53
TMEM260-204ENST00000553335 GJA3Q9Y6H8 435 aa11.76□□□□□ -0.53
TMEM260-204ENST00000553335 LDHCP07864 332 aa11.75□□□□□ -0.53
TMEM260-204ENST00000553335 PRDX5P30044 214 aa11.75□□□□□ -0.53
TMEM260-204ENST00000553335 MMP14P50281 582 aa11.75□□□□□ -0.53
TMEM260-204ENST00000553335 SLC9C2Q5TAH2 1124 aa11.75□□□□□ -0.53
TMEM260-204ENST00000553335 NAA16Q6N069 864 aaPredicted RBP11.75□□□□□ -0.53
TMEM260-204ENST00000553335 CERS5Q8N5B7 392 aa11.75□□□□□ -0.53
TMEM260-204ENST00000553335 TTF2Q9UNY4 1162 aaKnown RBP11.75□□□□□ -0.53
TMEM260-204ENST00000553335 ECM29Q5VYK3 1845 aa11.74□□□□□ -0.53
TMEM260-204ENST00000553335 F8W031 263 aaPredicted RBP11.74□□□□□ -0.53
TMEM260-204ENST00000553335 RNF113AO15541 343 aaKnown RBP11.74□□□□□ -0.53
TMEM260-204ENST00000553335 CDC45O75419 566 aa11.74□□□□□ -0.53
TMEM260-204ENST00000553335 ADD2P35612 726 aa11.74□□□□□ -0.53
TMEM260-204ENST00000553335 HDLBPQ00341 1268 aaKnown RBP11.74□□□□□ -0.53
TMEM260-204ENST00000553335 MECOMQ03112 1051 aa11.74□□□□□ -0.53
TMEM260-204ENST00000553335 UBE3CQ15386 1083 aa11.74□□□□□ -0.53
TMEM260-204ENST00000553335 KIAA0825Q8IV33 1275 aa11.74□□□□□ -0.53
TMEM260-204ENST00000553335 OGFOD1Q8N543 542 aa11.74□□□□□ -0.53
TMEM260-204ENST00000553335 MAGEB6Q8N7X4 407 aa11.74□□□□□ -0.53
TMEM260-204ENST00000553335 NSUN4Q96CB9 384 aaKnown RBP11.74□□□□□ -0.53
TMEM260-204ENST00000553335 DDX27Q96GQ7 796 aaKnown RBP11.74□□□□□ -0.53
TMEM260-204ENST00000553335 NOL10Q9BSC4 688 aaKnown RBP11.74□□□□□ -0.53
TMEM260-204ENST00000553335 MXD3Q9BW11 206 aa11.74□□□□□ -0.53
TMEM260-204ENST00000553335 MRIQ9BWK5 157 aa11.74□□□□□ -0.53
TMEM260-204ENST00000553335 DIAPH3Q9NSV4 1193 aa11.74□□□□□ -0.53
TMEM260-204ENST00000553335 ZNF541Q9H0D2 1346 aa11.74□□□□□ -0.53
TMEM260-204ENST00000553335 SCN4AP35499 1836 aa11.74□□□□□ -0.53
TMEM260-204ENST00000553335 USP17L8P0C7I0 530 aa11.73□□□□□ -0.53
TMEM260-204ENST00000553335 PDE6AP16499 860 aa11.73□□□□□ -0.53
TMEM260-204ENST00000553335 CYP7A1P22680 504 aa11.73□□□□□ -0.53
TMEM260-204ENST00000553335 GRIK5Q16478 980 aa11.73□□□□□ -0.53
TMEM260-204ENST00000553335 RUFY2Q8WXA3 655 aa11.73□□□□□ -0.53
TMEM260-204ENST00000553335 DPF2Q92785 391 aa11.73□□□□□ -0.53
TMEM260-204ENST00000553335 GPBP1L1Q9HC44 474 aaPredicted RBP11.73□□□□□ -0.53
TMEM260-204ENST00000553335 ZNF532Q9HCE3 1301 aa11.73□□□□□ -0.53
TMEM260-204ENST00000553335 ADAMTSL1Q8N6G6 1762 aa11.72□□□□□ -0.53
TMEM260-204ENST00000553335 GLTPD2A6NH11 291 aa11.72□□□□□ -0.53
TMEM260-204ENST00000553335 BAG3O95817 575 aa11.72□□□□□ -0.53
TMEM260-204ENST00000553335 LMOD1P29536 600 aaPredicted RBP11.72□□□□□ -0.53
TMEM260-204ENST00000553335 GMPSP49915 693 aaPredicted RBP11.72□□□□□ -0.53
TMEM260-204ENST00000553335 RBM5P52756 815 aaKnown RBP eCLIP11.72□□□□□ -0.53
TMEM260-204ENST00000553335 HHIPL2Q6UWX4 724 aa11.72□□□□□ -0.53
TMEM260-204ENST00000553335 CERS3Q8IU89 383 aa11.72□□□□□ -0.53
TMEM260-204ENST00000553335 ZNF526Q8TF50 670 aaPredicted RBP11.72□□□□□ -0.53
TMEM260-204ENST00000553335 APPBP2Q92624 585 aa11.72□□□□□ -0.53
TMEM260-204ENST00000553335 TEKT1Q969V4 418 aa11.72□□□□□ -0.53
TMEM260-204ENST00000553335 GMLQ99445 158 aa11.72□□□□□ -0.53
TMEM260-204ENST00000553335 HELLSQ9NRZ9 838 aa11.72□□□□□ -0.53
TMEM260-204ENST00000553335 BMP2KQ9NSY1 1161 aaPredicted RBP11.72□□□□□ -0.53
TMEM260-204ENST00000553335 SERPINA10Q9UK55 444 aa11.72□□□□□ -0.53
TMEM260-204ENST00000553335 MROH7-TTC4A0A0A0MT08 1334 aa11.71□□□□□ -0.53
TMEM260-204ENST00000553335 H7C1D1 291 aa11.71□□□□□ -0.53
TMEM260-204ENST00000553335 EIF5BO60841 1220 aaKnown RBP11.71□□□□□ -0.53
TMEM260-204ENST00000553335 DDNO94850 711 aaPredicted RBP11.71□□□□□ -0.53
TMEM260-204ENST00000553335 CHMLP26374 656 aa11.71□□□□□ -0.53
TMEM260-204ENST00000553335 CRKP46108 304 aa11.71□□□□□ -0.53
TMEM260-204ENST00000553335 SCNN1DP51172 638 aa11.71□□□□□ -0.53
TMEM260-204ENST00000553335 CLCN6P51797 869 aa11.71□□□□□ -0.53
TMEM260-204ENST00000553335 MFAP1P55081 439 aaKnown RBP11.71□□□□□ -0.53
TMEM260-204ENST00000553335 C1QTNF8P60827 252 aa11.71□□□□□ -0.53
TMEM260-204ENST00000553335 NMIQ13287 307 aaPredicted RBP11.71□□□□□ -0.53
TMEM260-204ENST00000553335 ZMYM1Q5SVZ6 1142 aa11.71□□□□□ -0.53
TMEM260-204ENST00000553335 CWC27Q6UX04 472 aaKnown RBP11.71□□□□□ -0.53
TMEM260-204ENST00000553335 FAM163AQ96GL9 167 aaPredicted RBP11.71□□□□□ -0.53
TMEM260-204ENST00000553335 CNOT7Q9UIV1 285 aaKnown RBP11.71□□□□□ -0.53
TMEM260-204ENST00000553335 CDK5RAP2Q96SN8 1893 aa11.71□□□□□ -0.53
TMEM260-204ENST00000553335 WDR90Q96KV7 1748 aa11.71□□□□□ -0.54
TMEM260-204ENST00000553335 FOCADQ5VW36 1801 aa11.7□□□□□ -0.54
TMEM260-204ENST00000553335 GAKO14976 1311 aa11.7□□□□□ -0.54
TMEM260-204ENST00000553335 RAD50Q92878 1312 aa11.7□□□□□ -0.54
TMEM260-204ENST00000553335 TCRBV5S4A2TA0A5A2 114 aa11.7□□□□□ -0.54
TMEM260-204ENST00000553335 TESPA1A2RU30 521 aaPredicted RBP11.7□□□□□ -0.54
TMEM260-204ENST00000553335 DIXDC1Q155Q3 683 aa11.7□□□□□ -0.54
TMEM260-204ENST00000553335 MCMDC2Q4G0Z9 681 aa11.7□□□□□ -0.54
TMEM260-204ENST00000553335 MICALL2Q8IY33 904 aa11.7□□□□□ -0.54
TMEM260-204ENST00000553335 AIDAQ96BJ3 306 aa11.7□□□□□ -0.54
TMEM260-204ENST00000553335 ARIH1Q9Y4X5 557 aaPredicted RBP11.7□□□□□ -0.54
TMEM260-204ENST00000553335 GPR75-ASB3A0A0A6YYF3 556 aa11.69□□□□□ -0.54
TMEM260-204ENST00000553335 MAGEB6P1A0A0J9YX57 407 aa11.69□□□□□ -0.54
TMEM260-204ENST00000553335 GALR2O43603 387 aaPredicted RBP11.69□□□□□ -0.54
TMEM260-204ENST00000553335 PLCG2P16885 1265 aa11.69□□□□□ -0.54
TMEM260-204ENST00000553335 BTDP43251 543 aa11.69□□□□□ -0.54
TMEM260-204ENST00000553335 ZNF280AP59817 542 aaPredicted RBP11.69□□□□□ -0.54
TMEM260-204ENST00000553335 DLGAP5Q15398 846 aa11.69□□□□□ -0.54
TMEM260-204ENST00000553335 CFAP100Q494V2 611 aa11.69□□□□□ -0.54
TMEM260-204ENST00000553335 MTMR14Q8NCE2 650 aa11.69□□□□□ -0.54
TMEM260-204ENST00000553335 ZNF384Q8TF68 577 aa11.69□□□□□ -0.54
TMEM260-204ENST00000553335 FAM227BQ96M60 508 aa11.69□□□□□ -0.54
TMEM260-204ENST00000553335 ZDHHC15Q96MV8 337 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms