RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 TDRD7Q8NHU6 1098 aaKnown RBP14.06□□□□□ -0.16
TMEM116-218ENST00000552839 EXOC6Q8TAG9 804 aa14.06□□□□□ -0.16
TMEM116-218ENST00000552839 SH3TC2Q8TF17 1288 aa14.06□□□□□ -0.16
TMEM116-218ENST00000552839 ARHGAP39Q9C0H5 1083 aa14.06□□□□□ -0.16
TMEM116-218ENST00000552839 TLR2O60603 784 aa14.05□□□□□ -0.16
TMEM116-218ENST00000552839 EPHA10Q5JZY3 1008 aa14.05□□□□□ -0.16
TMEM116-218ENST00000552839 LDHAL6AQ6ZMR3 332 aa14.05□□□□□ -0.16
TMEM116-218ENST00000552839 CSADQ9Y600 493 aa14.05□□□□□ -0.16
TMEM116-218ENST00000552839 CRKP46108 304 aa14.04□□□□□ -0.16
TMEM116-218ENST00000552839 GYG1P46976 350 aa14.04□□□□□ -0.16
TMEM116-218ENST00000552839 LACTBP83111 547 aaPredicted RBP14.04□□□□□ -0.16
TMEM116-218ENST00000552839 FAM84BQ96KN1 310 aaPredicted RBP14.04□□□□□ -0.16
TMEM116-218ENST00000552839 CNNM1Q9NRU3 951 aa14.04□□□□□ -0.16
TMEM116-218ENST00000552839 ZBTB40Q9NUA8 1239 aa14.04□□□□□ -0.16
TMEM116-218ENST00000552839 SPDYE5A6NIY4 337 aa14.03□□□□□ -0.16
TMEM116-218ENST00000552839 BTBD19C9JJ37 291 aa14.03□□□□□ -0.16
TMEM116-218ENST00000552839 HIBADHP31937 336 aaKnown RBP14.03□□□□□ -0.16
TMEM116-218ENST00000552839 TNNI2P48788 182 aa14.03□□□□□ -0.16
TMEM116-218ENST00000552839 UBE4AQ14139 1066 aa14.03□□□□□ -0.16
TMEM116-218ENST00000552839 GRIK5Q16478 980 aa14.03□□□□□ -0.16
TMEM116-218ENST00000552839 RPAP2Q8IXW5 612 aaPredicted RBP14.03□□□□□ -0.16
TMEM116-218ENST00000552839 ANKRD44Q8N8A2 993 aa14.03□□□□□ -0.16
TMEM116-218ENST00000552839 ZBTB47Q9UFB7 747 aaPredicted RBP14.03□□□□□ -0.16
TMEM116-218ENST00000552839 SNCAIPQ9Y6H5 919 aa14.03□□□□□ -0.16
TMEM116-218ENST00000552839 TRIOBPQ9H2D6 2365 aa14.02□□□□□ -0.16
TMEM116-218ENST00000552839 ECM2O94769 699 aaPredicted RBP14.02□□□□□ -0.17
TMEM116-218ENST00000552839 CETPP11597 493 aa14.02□□□□□ -0.17
TMEM116-218ENST00000552839 KIF22Q14807 665 aa14.02□□□□□ -0.17
TMEM116-218ENST00000552839 MTFR1Q15390 333 aa14.02□□□□□ -0.17
TMEM116-218ENST00000552839 RABL6Q3YEC7 729 aaPredicted RBP14.02□□□□□ -0.17
TMEM116-218ENST00000552839 CEP85Q6P2H3 762 aa14.02□□□□□ -0.17
TMEM116-218ENST00000552839 CHRDL2Q6WN34 429 aa14.02□□□□□ -0.17
TMEM116-218ENST00000552839 ERO1BQ86YB8 467 aa14.02□□□□□ -0.17
TMEM116-218ENST00000552839 SHISA4Q96DD7 197 aa14.02□□□□□ -0.17
TMEM116-218ENST00000552839 SIL1Q9H173 461 aa14.02□□□□□ -0.17
TMEM116-218ENST00000552839 IRF6O14896 467 aa14.01□□□□□ -0.17
TMEM116-218ENST00000552839 WDHD1O75717 1129 aaPredicted RBP14.01□□□□□ -0.17
TMEM116-218ENST00000552839 GNRH1P01148 92 aa14.01□□□□□ -0.17
TMEM116-218ENST00000552839 CTGFP29279 349 aa14.01□□□□□ -0.17
TMEM116-218ENST00000552839 CACNB3P54284 484 aa14.01□□□□□ -0.17
TMEM116-218ENST00000552839 G3BP1Q13283 466 aaKnown RBP eCLIP14.01□□□□□ -0.17
TMEM116-218ENST00000552839 ZKSCAN4Q969J2 545 aaPredicted RBP14.01□□□□□ -0.17
TMEM116-218ENST00000552839 KAZALD1Q96I82 304 aa14.01□□□□□ -0.17
TMEM116-218ENST00000552839 PUS3Q9BZE2 481 aaKnown RBP14.01□□□□□ -0.17
TMEM116-218ENST00000552839 ZCCHC17Q9NP64 241 aaKnown RBP14.01□□□□□ -0.17
TMEM116-218ENST00000552839 ATP8B2P98198 1209 aa14□□□□□ -0.17
TMEM116-218ENST00000552839 SNAPC2Q13487 334 aa14□□□□□ -0.17
TMEM116-218ENST00000552839 WRNIP1Q96S55 665 aa14□□□□□ -0.17
TMEM116-218ENST00000552839 RBM27Q9P2N5 1060 aaKnown RBP14□□□□□ -0.17
TMEM116-218ENST00000552839 IQSEC3Q9UPP2 1182 aaPredicted RBP14□□□□□ -0.17
TMEM116-218ENST00000552839 CEP290O15078 2479 aa14□□□□□ -0.17
TMEM116-218ENST00000552839 AK9Q5TCS8 1911 aa14□□□□□ -0.17
TMEM116-218ENST00000552839 MGAMO43451 1857 aa13.99□□□□□ -0.17
TMEM116-218ENST00000552839 PNMA6EA0A0J9YXQ4 647 aa13.99□□□□□ -0.17
TMEM116-218ENST00000552839 SURF6O75683 361 aaKnown RBP13.99□□□□□ -0.17
TMEM116-218ENST00000552839 PRMT2P55345 433 aa13.99□□□□□ -0.17
TMEM116-218ENST00000552839 HDLBPQ00341 1268 aaKnown RBP13.99□□□□□ -0.17
TMEM116-218ENST00000552839 MTX1Q13505 466 aa13.99□□□□□ -0.17
TMEM116-218ENST00000552839 HSP90AB4PQ58FF6 505 aa13.99□□□□□ -0.17
TMEM116-218ENST00000552839 METTL24Q5JXM2 366 aa13.99□□□□□ -0.17
TMEM116-218ENST00000552839 C17orf99Q6UX52 265 aa13.99□□□□□ -0.17
TMEM116-218ENST00000552839 DPF3Q92784 378 aa13.99□□□□□ -0.17
TMEM116-218ENST00000552839 BCL11AQ9H165 835 aa13.99□□□□□ -0.17
TMEM116-218ENST00000552839 RWDD1Q9H446 243 aaPredicted RBP13.99□□□□□ -0.17
TMEM116-218ENST00000552839 APBB1O00213 710 aa13.98□□□□□ -0.17
TMEM116-218ENST00000552839 PSMC4P43686 418 aa13.98□□□□□ -0.17
TMEM116-218ENST00000552839 CHAF1AQ13111 956 aaPredicted RBP13.98□□□□□ -0.17
TMEM116-218ENST00000552839 PPIL2Q13356 520 aa13.98□□□□□ -0.17
TMEM116-218ENST00000552839 FBXO33Q7Z6M2 555 aa13.98□□□□□ -0.17
TMEM116-218ENST00000552839 KLHDC4Q8TBB5 520 aa13.98□□□□□ -0.17
TMEM116-218ENST00000552839 TRIM47Q96LD4 638 aa13.98□□□□□ -0.17
TMEM116-218ENST00000552839 SRRDQ9UH36 339 aa13.98□□□□□ -0.17
TMEM116-218ENST00000552839 CPA4Q9UI42 421 aa13.98□□□□□ -0.17
TMEM116-218ENST00000552839 PA2G4Q9UQ80 394 aaKnown RBP13.98□□□□□ -0.17
TMEM116-218ENST00000552839 RIPOR2Q9Y4F9 1068 aa13.98□□□□□ -0.17
TMEM116-218ENST00000552839 MROH5Q6ZUA9 1318 aa13.97□□□□□ -0.17
TMEM116-218ENST00000552839 EYA2O00167 538 aa13.97□□□□□ -0.17
TMEM116-218ENST00000552839 OSBPP22059 807 aa13.97□□□□□ -0.17
TMEM116-218ENST00000552839 GRK4P32298 578 aa13.97□□□□□ -0.17
TMEM116-218ENST00000552839 UBE2Q1Q7Z7E8 422 aa13.97□□□□□ -0.17
TMEM116-218ENST00000552839 FAM83AQ86UY5 434 aa13.97□□□□□ -0.17
TMEM116-218ENST00000552839 ERC1Q8IUD2 1116 aa13.97□□□□□ -0.17
TMEM116-218ENST00000552839 SSH3Q8TE77 659 aa13.97□□□□□ -0.17
TMEM116-218ENST00000552839 TEKT1Q969V4 418 aa13.97□□□□□ -0.17
TMEM116-218ENST00000552839 ZDHHC15Q96MV8 337 aa13.97□□□□□ -0.17
TMEM116-218ENST00000552839 SZT2Q5T011 3432 aa13.97□□□□□ -0.17
TMEM116-218ENST00000552839 ADGRA2Q96PE1 1338 aa13.96□□□□□ -0.17
TMEM116-218ENST00000552839 MYH13Q9UKX3 1938 aa13.96□□□□□ -0.17
TMEM116-218ENST00000552839 INPP5BP32019 993 aa13.96□□□□□ -0.17
TMEM116-218ENST00000552839 IL15P40933 162 aaPredicted RBP13.96□□□□□ -0.17
TMEM116-218ENST00000552839 GJA8P48165 433 aa13.96□□□□□ -0.17
TMEM116-218ENST00000552839 PPATQ06203 517 aa13.96□□□□□ -0.17
TMEM116-218ENST00000552839 APOBEC3HQ6NTF7 200 aaKnown RBP13.96□□□□□ -0.17
TMEM116-218ENST00000552839 ANKRD23Q86SG2 305 aa13.96□□□□□ -0.17
TMEM116-218ENST00000552839 VPS37DQ86XT2 251 aa13.96□□□□□ -0.17
TMEM116-218ENST00000552839 NKX2-3Q8TAU0 364 aa13.96□□□□□ -0.17
TMEM116-218ENST00000552839 TBC1D22AQ8WUA7 517 aa13.96□□□□□ -0.17
TMEM116-218ENST00000552839 MRIQ9BWK5 157 aa13.96□□□□□ -0.17
TMEM116-218ENST00000552839 PRO3102Q9H379 93 aa13.96□□□□□ -0.17
TMEM116-218ENST00000552839 COPRSQ9NQ92 184 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms