RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, human

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK4-211	ENST00000552254	KIF1BP	Q96EK5	621 aa		11.25	□□□□□ -0.61
CDK4-211	ENST00000552254	PRMT6	Q96LA8	375 aa	Predicted RBP	11.25	□□□□□ -0.61
CDK4-211	ENST00000552254	DBNDD2	Q9BQY9	259 aa		11.25	□□□□□ -0.61
CDK4-211	ENST00000552254	DCTPP1	Q9H773	170 aa		11.25	□□□□□ -0.61
CDK4-211	ENST00000552254	DENND2A	Q9ULE3	1009 aa		11.25	□□□□□ -0.61
CDK4-211	ENST00000552254	TRIM17	Q9Y577	477 aa		11.25	□□□□□ -0.61
CDK4-211	ENST00000552254	POTEF	A5A3E0	1075 aa		11.24	□□□□□ -0.61
CDK4-211	ENST00000552254	ARID4A	P29374	1257 aa	Predicted RBP	11.24	□□□□□ -0.61
CDK4-211	ENST00000552254	RBM5	P52756	815 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
CDK4-211	ENST00000552254	FKBP1B	P68106	108 aa		11.24	□□□□□ -0.61
CDK4-211	ENST00000552254	RASGRF1	Q13972	1273 aa		11.24	□□□□□ -0.61
CDK4-211	ENST00000552254	WDR66	Q8TBY9	1149 aa		11.24	□□□□□ -0.61
CDK4-211	ENST00000552254	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.24	□□□□□ -0.61
CDK4-211	ENST00000552254	IL1RAPL2	Q9NP60	686 aa		11.24	□□□□□ -0.61
CDK4-211	ENST00000552254	DBNL	Q9UJU6	430 aa	Known RBP	11.24	□□□□□ -0.61
CDK4-211	ENST00000552254	COLQ	Q9Y215	455 aa	Predicted RBP	11.24	□□□□□ -0.61
CDK4-211	ENST00000552254	IRX6	P78412	446 aa	Predicted RBP	11.23	□□□□□ -0.61
CDK4-211	ENST00000552254	CCDC158	Q5M9N0	1113 aa		11.23	□□□□□ -0.61
CDK4-211	ENST00000552254	AACS	Q86V21	672 aa		11.23	□□□□□ -0.61
CDK4-211	ENST00000552254	MTMR14	Q8NCE2	650 aa		11.23	□□□□□ -0.61
CDK4-211	ENST00000552254	VEZT	Q9HBM0	779 aa		11.23	□□□□□ -0.61
CDK4-211	ENST00000552254	TLR7	Q9NYK1	1049 aa	Known RBP	11.23	□□□□□ -0.61
CDK4-211	ENST00000552254	TTF2	Q9UNY4	1162 aa	Known RBP	11.23	□□□□□ -0.61
CDK4-211	ENST00000552254	PDS5A	Q29RF7	1337 aa	Known RBP	11.23	□□□□□ -0.61
CDK4-211	ENST00000552254	SALL1	Q9NSC2	1324 aa		11.23	□□□□□ -0.61
CDK4-211	ENST00000552254	SPDYE2B	A6NHP3	402 aa		11.22	□□□□□ -0.61
CDK4-211	ENST00000552254	UQCRFS1P1	P0C7P4	283 aa		11.22	□□□□□ -0.61
CDK4-211	ENST00000552254	SPDYE6	P0CI01	402 aa		11.22	□□□□□ -0.61
CDK4-211	ENST00000552254	NF2	P35240	595 aa		11.22	□□□□□ -0.61
CDK4-211	ENST00000552254	MCAM	P43121	646 aa		11.22	□□□□□ -0.61
CDK4-211	ENST00000552254	LAMA3	Q16787	3333 aa		11.22	□□□□□ -0.61
CDK4-211	ENST00000552254	TTC39A	Q5SRH9	613 aa		11.22	□□□□□ -0.61
CDK4-211	ENST00000552254	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.22	□□□□□ -0.61
CDK4-211	ENST00000552254	CLASRP	Q8N2M8	674 aa	Known RBP	11.22	□□□□□ -0.61
CDK4-211	ENST00000552254	SPATA5	Q8NB90	893 aa		11.22	□□□□□ -0.61
CDK4-211	ENST00000552254	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.22	□□□□□ -0.61
CDK4-211	ENST00000552254	TMEM106C	Q9BVX2	250 aa		11.22	□□□□□ -0.61
CDK4-211	ENST00000552254	LRRCC1	Q9C099	1032 aa		11.22	□□□□□ -0.61
CDK4-211	ENST00000552254	DEFB129	Q9H1M3	183 aa		11.22	□□□□□ -0.61
CDK4-211	ENST00000552254	HMG20B	Q9P0W2	317 aa		11.22	□□□□□ -0.61
CDK4-211	ENST00000552254	ANGEL1	Q9UNK9	670 aa	Known RBP	11.22	□□□□□ -0.61
CDK4-211	ENST00000552254	SUGT1	Q9Y2Z0	365 aa		11.22	□□□□□ -0.61
CDK4-211	ENST00000552254	DOCK2	Q92608	1830 aa		11.21	□□□□□ -0.61
CDK4-211	ENST00000552254	SSC5D	A1L4H1	1573 aa		11.21	□□□□□ -0.61
CDK4-211	ENST00000552254	SMARCA5	O60264	1052 aa	Predicted RBP	11.21	□□□□□ -0.61
CDK4-211	ENST00000552254	HDLBP	Q00341	1268 aa	Known RBP	11.21	□□□□□ -0.61
CDK4-211	ENST00000552254	HDAC1	Q13547	482 aa	Predicted RBP	11.21	□□□□□ -0.61
CDK4-211	ENST00000552254	NOM1	Q5C9Z4	860 aa	Known RBP	11.21	□□□□□ -0.61
CDK4-211	ENST00000552254	PI16	Q6UXB8	463 aa		11.21	□□□□□ -0.61
CDK4-211	ENST00000552254	MRI	Q9BWK5	157 aa		11.21	□□□□□ -0.61
CDK4-211	ENST00000552254	TDRD3	Q9H7E2	651 aa	Known RBP	11.21	□□□□□ -0.61
CDK4-211	ENST00000552254	SERPINA10	Q9UK55	444 aa		11.21	□□□□□ -0.61
CDK4-211	ENST00000552254	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.21	□□□□□ -0.62
CDK4-211	ENST00000552254	PIEZO1	Q92508	2521 aa		11.2	□□□□□ -0.62
CDK4-211	ENST00000552254	CENPF	P49454	3210 aa		11.2	□□□□□ -0.62
CDK4-211	ENST00000552254	MAST3	O60307	1309 aa		11.2	□□□□□ -0.62
CDK4-211	ENST00000552254	MYO1B	O43795	1136 aa		11.2	□□□□□ -0.62
CDK4-211	ENST00000552254	LDHB	P07195	334 aa	Known RBP	11.2	□□□□□ -0.62
CDK4-211	ENST00000552254	IFIT2	P09913	472 aa	Known RBP	11.2	□□□□□ -0.62
CDK4-211	ENST00000552254	PRDX5	P30044	214 aa		11.2	□□□□□ -0.62
CDK4-211	ENST00000552254	CRK	P46108	304 aa		11.2	□□□□□ -0.62
CDK4-211	ENST00000552254	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.2	□□□□□ -0.62
CDK4-211	ENST00000552254	CDAN1	Q8IWY9	1227 aa		11.2	□□□□□ -0.62
CDK4-211	ENST00000552254	ZGPAT	Q8N5A5	531 aa	Known RBP	11.2	□□□□□ -0.62
CDK4-211	ENST00000552254	BCL11A	Q9H165	835 aa		11.2	□□□□□ -0.62
CDK4-211	ENST00000552254	SNRK	Q9NRH2	765 aa		11.2	□□□□□ -0.62
CDK4-211	ENST00000552254	MAST2	Q6P0Q8	1798 aa		11.2	□□□□□ -0.62
CDK4-211	ENST00000552254	ALDH1A1	P00352	501 aa		11.19	□□□□□ -0.62
CDK4-211	ENST00000552254	EN2	P19622	333 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK4-211	ENST00000552254	TM4SF4	P48230	202 aa		11.19	□□□□□ -0.62
CDK4-211	ENST00000552254	RASA3	Q14644	834 aa		11.19	□□□□□ -0.62
CDK4-211	ENST00000552254	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK4-211	ENST00000552254	HHIPL2	Q6UWX4	724 aa		11.19	□□□□□ -0.62
CDK4-211	ENST00000552254	TBC1D9	Q6ZT07	1266 aa		11.19	□□□□□ -0.62
CDK4-211	ENST00000552254	ARMC9	Q7Z3E5	817 aa		11.19	□□□□□ -0.62
CDK4-211	ENST00000552254	TEKT1	Q969V4	418 aa		11.19	□□□□□ -0.62
CDK4-211	ENST00000552254	CLMN	Q96JQ2	1002 aa		11.19	□□□□□ -0.62
CDK4-211	ENST00000552254	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK4-211	ENST00000552254	ZNF70	Q9UC06	446 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK4-211	ENST00000552254	ABCF2	Q9UG63	623 aa		11.19	□□□□□ -0.62
CDK4-211	ENST00000552254	MYH7	P12883	1935 aa		11.19	□□□□□ -0.62
CDK4-211	ENST00000552254	OTOF	Q9HC10	1997 aa		11.18	□□□□□ -0.62
CDK4-211	ENST00000552254	TCP10L2	B9ZVM9	353 aa		11.18	□□□□□ -0.62
CDK4-211	ENST00000552254	IGHD	P01880	384 aa		11.18	□□□□□ -0.62
CDK4-211	ENST00000552254	CYP2E1	P05181	493 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK4-211	ENST00000552254	ZAP70	P43403	619 aa		11.18	□□□□□ -0.62
CDK4-211	ENST00000552254	CACNB3	P54284	484 aa		11.18	□□□□□ -0.62
CDK4-211	ENST00000552254	DIXDC1	Q155Q3	683 aa		11.18	□□□□□ -0.62
CDK4-211	ENST00000552254	LDLRAD1	Q5T700	205 aa		11.18	□□□□□ -0.62
CDK4-211	ENST00000552254	ERICH6	Q7L0X2	663 aa		11.18	□□□□□ -0.62
CDK4-211	ENST00000552254	OTOP1	Q7RTM1	612 aa		11.18	□□□□□ -0.62
CDK4-211	ENST00000552254	ERO1A	Q96HE7	468 aa		11.18	□□□□□ -0.62
CDK4-211	ENST00000552254	ZDHHC15	Q96MV8	337 aa		11.18	□□□□□ -0.62
CDK4-211	ENST00000552254	RWDD1	Q9H446	243 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK4-211	ENST00000552254	CDK5RAP2	Q96SN8	1893 aa		11.18	□□□□□ -0.62
CDK4-211	ENST00000552254	AK9	Q5TCS8	1911 aa		11.17	□□□□□ -0.62
CDK4-211	ENST00000552254	MECOM	Q03112	1051 aa		11.17	□□□□□ -0.62
CDK4-211	ENST00000552254	SLC4A8	Q2Y0W8	1093 aa		11.17	□□□□□ -0.62
CDK4-211	ENST00000552254	SPDYE2	Q495Y8	402 aa		11.17	□□□□□ -0.62
CDK4-211	ENST00000552254	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.17	□□□□□ -0.62

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