RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 USP40Q9NVE5 1235 aa20.55■□□□□ 0.88
BRF1-219ENST00000551787 DBNLQ9UJU6 430 aaKnown RBP20.55■□□□□ 0.88
BRF1-219ENST00000551787 ARAP2Q8WZ64 1704 aa20.55■□□□□ 0.88
BRF1-219ENST00000551787 ZBTB22O15209 634 aa20.54■□□□□ 0.88
BRF1-219ENST00000551787 MECOMQ03112 1051 aa20.54■□□□□ 0.88
BRF1-219ENST00000551787 TCP10Q12799 353 aa20.54■□□□□ 0.88
BRF1-219ENST00000551787 ERICH6Q7L0X2 663 aa20.54■□□□□ 0.88
BRF1-219ENST00000551787 CHMP4BQ9H444 224 aaKnown RBP20.54■□□□□ 0.88
BRF1-219ENST00000551787 PDS5AQ29RF7 1337 aaKnown RBP20.53■□□□□ 0.88
BRF1-219ENST00000551787 HMMRO75330 724 aa20.53■□□□□ 0.88
BRF1-219ENST00000551787 NFIAQ12857 509 aa20.53■□□□□ 0.88
BRF1-219ENST00000551787 SLC10A4Q96EP9 437 aa20.53■□□□□ 0.88
BRF1-219ENST00000551787 MYH13Q9UKX3 1938 aa20.53■□□□□ 0.88
BRF1-219ENST00000551787 AACSQ86V21 672 aa20.52■□□□□ 0.88
BRF1-219ENST00000551787 ERC1Q8IUD2 1116 aa20.52■□□□□ 0.88
BRF1-219ENST00000551787 ZNF384Q8TF68 577 aa20.52■□□□□ 0.88
BRF1-219ENST00000551787 RAI14Q9P0K7 980 aa20.52■□□□□ 0.88
BRF1-219ENST00000551787 ECM29Q5VYK3 1845 aa20.51■□□□□ 0.87
BRF1-219ENST00000551787 IREB2P48200 963 aaKnown RBP20.51■□□□□ 0.87
BRF1-219ENST00000551787 MAP3K11Q16584 847 aa20.51■□□□□ 0.87
BRF1-219ENST00000551787 HSP90AB4PQ58FF6 505 aa20.51■□□□□ 0.87
BRF1-219ENST00000551787 FKBP1CQ5VVH2 108 aa20.51■□□□□ 0.87
BRF1-219ENST00000551787 FAM83AQ86UY5 434 aa20.51■□□□□ 0.87
BRF1-219ENST00000551787 RHPN1Q8TCX5 695 aa20.51■□□□□ 0.87
BRF1-219ENST00000551787 LRP2BPQ9P2M1 347 aa20.51■□□□□ 0.87
BRF1-219ENST00000551787 THSD7BQ9C0I4 1608 aa20.51■□□□□ 0.87
BRF1-219ENST00000551787 TRPA1O75762 1119 aa20.5■□□□□ 0.87
BRF1-219ENST00000551787 MIGA2Q7L4E1 593 aa20.5■□□□□ 0.87
BRF1-219ENST00000551787 ZFPM1Q8IX07 1006 aa20.5■□□□□ 0.87
BRF1-219ENST00000551787 PRDM10Q9NQV6 1147 aa20.5■□□□□ 0.87
BRF1-219ENST00000551787 RNF186Q9NXI6 227 aa20.5■□□□□ 0.87
BRF1-219ENST00000551787 GAKO14976 1311 aa20.5■□□□□ 0.87
BRF1-219ENST00000551787 BTDP43251 543 aa20.49■□□□□ 0.87
BRF1-219ENST00000551787 ZAP70P43403 619 aa20.49■□□□□ 0.87
BRF1-219ENST00000551787 SLF2Q8IX21 1173 aa20.49■□□□□ 0.87
BRF1-219ENST00000551787 TNS4Q8IZW8 715 aa20.49■□□□□ 0.87
BRF1-219ENST00000551787 NSUN4Q96CB9 384 aaKnown RBP20.49■□□□□ 0.87
BRF1-219ENST00000551787 FAM198AQ9UFP1 575 aa20.49■□□□□ 0.87
BRF1-219ENST00000551787 NDUFB9Q9Y6M9 179 aa20.49■□□□□ 0.87
BRF1-219ENST00000551787 CYP2E1P05181 493 aaPredicted RBP20.48■□□□□ 0.87
BRF1-219ENST00000551787 RRP1P56182 461 aaKnown RBP20.48■□□□□ 0.87
BRF1-219ENST00000551787 SPRYD7Q5W111 196 aa20.48■□□□□ 0.87
BRF1-219ENST00000551787 FAM163AQ96GL9 167 aaPredicted RBP20.48■□□□□ 0.87
BRF1-219ENST00000551787 ELP3Q9H9T3 547 aa20.48■□□□□ 0.87
BRF1-219ENST00000551787 MROH7-TTC4A0A0A0MT08 1334 aa20.48■□□□□ 0.87
BRF1-219ENST00000551787 CA12O43570 354 aa20.47■□□□□ 0.87
BRF1-219ENST00000551787 RGS3P49796 1198 aa20.47■□□□□ 0.87
BRF1-219ENST00000551787 MAP3K9P80192 1104 aa20.47■□□□□ 0.87
BRF1-219ENST00000551787 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.47■□□□□ 0.87
BRF1-219ENST00000551787 ANKRD13AQ8IZ07 590 aa20.47■□□□□ 0.87
BRF1-219ENST00000551787 FAM151AQ8WW52 585 aa20.47■□□□□ 0.87
BRF1-219ENST00000551787 KIF1BPQ96EK5 621 aa20.47■□□□□ 0.87
BRF1-219ENST00000551787 WNK4Q96J92 1243 aa20.47■□□□□ 0.87
BRF1-219ENST00000551787 ZNF512BQ96KM6 892 aaPredicted RBP20.47■□□□□ 0.87
BRF1-219ENST00000551787 PIH1D3Q9NQM4 214 aaKnown RBP20.47■□□□□ 0.87
BRF1-219ENST00000551787 GPR75-ASB3A0A0A6YYF3 556 aa20.46■□□□□ 0.87
BRF1-219ENST00000551787 GSTO1P78417 241 aa20.46■□□□□ 0.87
BRF1-219ENST00000551787 CNKSR2Q8WXI2 1034 aa20.46■□□□□ 0.87
BRF1-219ENST00000551787 RAB11FIP3O75154 756 aa20.45■□□□□ 0.86
BRF1-219ENST00000551787 LDHCP07864 332 aa20.45■□□□□ 0.86
BRF1-219ENST00000551787 GJA5P36382 358 aa20.45■□□□□ 0.86
BRF1-219ENST00000551787 PICALMQ13492 652 aa20.45■□□□□ 0.86
BRF1-219ENST00000551787 VGLL4Q14135 290 aa20.45■□□□□ 0.86
BRF1-219ENST00000551787 CLASRPQ8N2M8 674 aaKnown RBP20.45■□□□□ 0.86
BRF1-219ENST00000551787 WDHD1O75717 1129 aaPredicted RBP20.44■□□□□ 0.86
BRF1-219ENST00000551787 IFIT2P09913 472 aaKnown RBP20.44■□□□□ 0.86
BRF1-219ENST00000551787 TM4SF4P48230 202 aa20.44■□□□□ 0.86
BRF1-219ENST00000551787 RHBDL3P58872 404 aa20.44■□□□□ 0.86
BRF1-219ENST00000551787 NAA16Q6N069 864 aaPredicted RBP20.44■□□□□ 0.86
BRF1-219ENST00000551787 REM2Q8IYK8 340 aaPredicted RBP20.44■□□□□ 0.86
BRF1-219ENST00000551787 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.44■□□□□ 0.86
BRF1-219ENST00000551787 ZKSCAN4Q969J2 545 aaPredicted RBP20.44■□□□□ 0.86
BRF1-219ENST00000551787 WRNIP1Q96S55 665 aa20.44■□□□□ 0.86
BRF1-219ENST00000551787 IDI2Q9BXS1 227 aa20.44■□□□□ 0.86
BRF1-219ENST00000551787 DDX4Q9NQI0 724 aaKnown RBP20.44■□□□□ 0.86
BRF1-219ENST00000551787 MYH2Q9UKX2 1941 aa20.43■□□□□ 0.86
BRF1-219ENST00000551787 SMARCA5O60264 1052 aaPredicted RBP20.43■□□□□ 0.86
BRF1-219ENST00000551787 SLURP2P0DP57 97 aa20.43■□□□□ 0.86
BRF1-219ENST00000551787 ZSCAN29Q8IWY8 852 aaPredicted RBP20.43■□□□□ 0.86
BRF1-219ENST00000551787 OPTNQ96CV9 577 aa20.43■□□□□ 0.86
BRF1-219ENST00000551787 ANTXR1Q9H6X2 564 aa20.43■□□□□ 0.86
BRF1-219ENST00000551787 CSADQ9Y600 493 aa20.43■□□□□ 0.86
BRF1-219ENST00000551787 UNCXA6NJT0 531 aa20.42■□□□□ 0.86
BRF1-219ENST00000551787 IDH1O75874 414 aaKnown RBP20.42■□□□□ 0.86
BRF1-219ENST00000551787 TBC1D8O95759 1140 aa20.42■□□□□ 0.86
BRF1-219ENST00000551787 IFFO2Q5TF58 517 aa20.42■□□□□ 0.86
BRF1-219ENST00000551787 DCAF15Q66K64 600 aa20.42■□□□□ 0.86
BRF1-219ENST00000551787 SH3BP5LQ7L8J4 393 aa20.42■□□□□ 0.86
BRF1-219ENST00000551787 ADGRA1Q86SQ6 560 aa20.42■□□□□ 0.86
BRF1-219ENST00000551787 HOOK2Q96ED9 719 aa20.42■□□□□ 0.86
BRF1-219ENST00000551787 CRBNQ96SW2 442 aa20.42■□□□□ 0.86
BRF1-219ENST00000551787 ZNF341Q9BYN7 854 aa20.42■□□□□ 0.86
BRF1-219ENST00000551787 SAGE1Q9NXZ1 904 aa20.42■□□□□ 0.86
BRF1-219ENST00000551787 AATFQ9NY61 560 aaKnown RBP eCLIP20.42■□□□□ 0.86
BRF1-219ENST00000551787 PCDHB15Q9Y5E8 787 aa20.42■□□□□ 0.86
BRF1-219ENST00000551787 DDTLA6NHG4 134 aaPredicted RBP20.41■□□□□ 0.86
BRF1-219ENST00000551787 ENTPD3O75355 529 aa20.41■□□□□ 0.86
BRF1-219ENST00000551787 ZBTB48P10074 688 aaPredicted RBP20.41■□□□□ 0.86
BRF1-219ENST00000551787 SREBF2Q12772 1141 aa20.41■□□□□ 0.86
BRF1-219ENST00000551787 SH3RF3Q8TEJ3 882 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms