RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 MRPL58Q14197 206 aaKnown RBP5.95□□□□□ -1.46
SCAF11-215ENST00000551391 RNF19AQ9NV58 838 aa5.95□□□□□ -1.46
SCAF11-215ENST00000551391 SOX13Q9UN79 622 aa5.95□□□□□ -1.46
SCAF11-215ENST00000551391 ANGEL1Q9UNK9 670 aaKnown RBP5.95□□□□□ -1.46
SCAF11-215ENST00000551391 GSTT1P30711 240 aa5.94□□□□□ -1.46
SCAF11-215ENST00000551391 RPS26P11Q5JNZ5 115 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-215ENST00000551391 ADAMTSL4Q6UY14 1074 aa5.94□□□□□ -1.46
SCAF11-215ENST00000551391 MFSD14AQ96MC6 490 aa5.94□□□□□ -1.46
SCAF11-215ENST00000551391 PIM2Q9P1W9 311 aa5.94□□□□□ -1.46
SCAF11-215ENST00000551391 LEMD3Q9Y2U8 911 aa5.94□□□□□ -1.46
SCAF11-215ENST00000551391 C19orf57Q0VDD7 668 aa5.93□□□□□ -1.46
SCAF11-215ENST00000551391 SPRED3Q2MJR0 410 aa5.93□□□□□ -1.46
SCAF11-215ENST00000551391 NUTM2GQ5VZR2 741 aa5.93□□□□□ -1.46
SCAF11-215ENST00000551391 VN1R5Q7Z5H4 357 aa5.93□□□□□ -1.46
SCAF11-215ENST00000551391 C3orf58Q8NDZ4 430 aa5.93□□□□□ -1.46
SCAF11-215ENST00000551391 OSBPL1AQ9BXW6 950 aa5.93□□□□□ -1.46
SCAF11-215ENST00000551391 MRS2Q9HD23 443 aa5.93□□□□□ -1.46
SCAF11-215ENST00000551391 PPM1HQ9ULR3 514 aa5.93□□□□□ -1.46
SCAF11-215ENST00000551391 KRTAP4-8A0A0G2JLE6 195 aa5.92□□□□□ -1.46
SCAF11-215ENST00000551391 MEGF11A6BM72 1044 aa5.92□□□□□ -1.46
SCAF11-215ENST00000551391 UNCXA6NJT0 531 aa5.92□□□□□ -1.46
SCAF11-215ENST00000551391 METTL12A8MUP2 240 aa5.92□□□□□ -1.46
SCAF11-215ENST00000551391 EIF4EBP3O60516 100 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-215ENST00000551391 MAP4P27816 1152 aaKnown RBP5.92□□□□□ -1.46
SCAF11-215ENST00000551391 FCGRTP55899 365 aa5.92□□□□□ -1.46
SCAF11-215ENST00000551391 DTHD1Q6ZMT9 781 aa5.92□□□□□ -1.46
SCAF11-215ENST00000551391 FBXL6Q8N531 539 aa5.92□□□□□ -1.46
SCAF11-215ENST00000551391 C12orf50Q8NA57 414 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-215ENST00000551391 ASAP3Q8TDY4 903 aa5.92□□□□□ -1.46
SCAF11-215ENST00000551391 FAM161BQ96MY7 647 aa5.92□□□□□ -1.46
SCAF11-215ENST00000551391 CLEC4MQ9H2X3 399 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-215ENST00000551391 ZNF576Q9H609 170 aa5.92□□□□□ -1.46
SCAF11-215ENST00000551391 CTSHP09668 335 aa5.91□□□□□ -1.46
SCAF11-215ENST00000551391 USP17L7P0C7H9 530 aa5.91□□□□□ -1.46
SCAF11-215ENST00000551391 USP11P51784 963 aa5.91□□□□□ -1.46
SCAF11-215ENST00000551391 MRRFQ96E11 262 aaKnown RBP5.91□□□□□ -1.46
SCAF11-215ENST00000551391 CRELD1Q96HD1 420 aa5.91□□□□□ -1.46
SCAF11-215ENST00000551391 SOX17Q9H6I2 414 aaPredicted RBP5.91□□□□□ -1.46
SCAF11-215ENST00000551391 CYP4F12Q9HCS2 524 aa5.91□□□□□ -1.46
SCAF11-215ENST00000551391 KIAA1522Q9P206 1035 aaPredicted RBP5.91□□□□□ -1.46
SCAF11-215ENST00000551391 ADGRE2Q9UHX3 823 aa5.91□□□□□ -1.46
SCAF11-215ENST00000551391 USP31Q70CQ4 1352 aa5.91□□□□□ -1.46
SCAF11-215ENST00000551391 ESRRAP11474 423 aaPredicted RBP5.9□□□□□ -1.46
SCAF11-215ENST00000551391 HOXA10P31260 410 aaPredicted RBP5.9□□□□□ -1.46
SCAF11-215ENST00000551391 FZD5Q13467 585 aa5.9□□□□□ -1.46
SCAF11-215ENST00000551391 IKBKEQ14164 716 aa5.9□□□□□ -1.46
SCAF11-215ENST00000551391 NFKBIBQ15653 356 aa5.9□□□□□ -1.46
SCAF11-215ENST00000551391 SGO2Q562F6 1265 aa5.9□□□□□ -1.46
SCAF11-215ENST00000551391 PAOXQ6QHF9 649 aa5.9□□□□□ -1.46
SCAF11-215ENST00000551391 VTI1BQ9UEU0 232 aa5.9□□□□□ -1.46
SCAF11-215ENST00000551391 FAM95CA0A1B0GW59 222 aa5.89□□□□□ -1.47
SCAF11-215ENST00000551391 SOX1O00570 391 aaPredicted RBP5.89□□□□□ -1.47
SCAF11-215ENST00000551391 B3GALT4O96024 378 aa5.89□□□□□ -1.47
SCAF11-215ENST00000551391 ST13P50502 369 aaKnown RBP5.89□□□□□ -1.47
SCAF11-215ENST00000551391 PCDH1Q08174 1060 aa5.89□□□□□ -1.47
SCAF11-215ENST00000551391 CPSF6Q16630 551 aaKnown RBP eCLIP5.89□□□□□ -1.47
SCAF11-215ENST00000551391 ZNF423Q2M1K9 1284 aa5.89□□□□□ -1.47
SCAF11-215ENST00000551391 ZNF428Q96B54 188 aa5.89□□□□□ -1.47
SCAF11-215ENST00000551391 USP26Q9BXU7 913 aa5.89□□□□□ -1.47
SCAF11-215ENST00000551391 CEP44Q9C0F1 390 aa5.89□□□□□ -1.47
SCAF11-215ENST00000551391 F13BP05160 661 aa5.88□□□□□ -1.47
SCAF11-215ENST00000551391 RBM25P49756 843 aaKnown RBP5.88□□□□□ -1.47
SCAF11-215ENST00000551391 TAF1CQ15572 869 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-215ENST00000551391 LDLRAD1Q5T700 205 aa5.88□□□□□ -1.47
SCAF11-215ENST00000551391 TP53INP2Q8IXH6 220 aa5.88□□□□□ -1.47
SCAF11-215ENST00000551391 ABI1Q8IZP0 508 aa5.88□□□□□ -1.47
SCAF11-215ENST00000551391 FBXL18Q96ME1 805 aa5.88□□□□□ -1.47
SCAF11-215ENST00000551391 METTL22Q9BUU2 404 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-215ENST00000551391 YIPF2Q9BWQ6 316 aa5.88□□□□□ -1.47
SCAF11-215ENST00000551391 BACH2Q9BYV9 841 aa5.88□□□□□ -1.47
SCAF11-215ENST00000551391 AKAP2Q9Y2D5 859 aa5.88□□□□□ -1.47
SCAF11-215ENST00000551391 RECKO95980 971 aa5.87□□□□□ -1.47
SCAF11-215ENST00000551391 FOSL1P15407 271 aa5.87□□□□□ -1.47
SCAF11-215ENST00000551391 FAAP100Q0VG06 881 aa5.87□□□□□ -1.47
SCAF11-215ENST00000551391 EXOSC6Q5RKV6 272 aaKnown RBP5.87□□□□□ -1.47
SCAF11-215ENST00000551391 SV2BQ7L1I2 683 aa5.87□□□□□ -1.47
SCAF11-215ENST00000551391 VSIG10LQ86VR7 867 aa5.87□□□□□ -1.47
SCAF11-215ENST00000551391 SMG8Q8ND04 991 aaKnown RBP5.87□□□□□ -1.47
SCAF11-215ENST00000551391 DDX54Q8TDD1 881 aaKnown RBP5.87□□□□□ -1.47
SCAF11-215ENST00000551391 NECAB3Q96P71 396 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-215ENST00000551391 NOC4LQ9BVI4 516 aaKnown RBP5.87□□□□□ -1.47
SCAF11-215ENST00000551391 TMPRSS13Q9BYE2 586 aa5.87□□□□□ -1.47
SCAF11-215ENST00000551391 SUGCTQ9HAC7 445 aa5.87□□□□□ -1.47
SCAF11-215ENST00000551391 CCDC39Q9UFE4 941 aa5.87□□□□□ -1.47
SCAF11-215ENST00000551391 E9PSI1 815 aa5.86□□□□□ -1.47
SCAF11-215ENST00000551391 CYP26A1O43174 497 aa5.86□□□□□ -1.47
SCAF11-215ENST00000551391 PPP2R3AQ06190 1150 aa5.86□□□□□ -1.47
SCAF11-215ENST00000551391 HGSNATQ68CP4 663 aa5.86□□□□□ -1.47
SCAF11-215ENST00000551391 FBLIM1Q8WUP2 373 aa5.86□□□□□ -1.47
SCAF11-215ENST00000551391 ASIC4Q96FT7 647 aa5.86□□□□□ -1.47
SCAF11-215ENST00000551391 TMEM39AQ9NV64 488 aa5.86□□□□□ -1.47
SCAF11-215ENST00000551391 GSTM4Q03013 218 aa5.85□□□□□ -1.47
SCAF11-215ENST00000551391 MEI1Q5TIA1 1274 aa5.85□□□□□ -1.47
SCAF11-215ENST00000551391 TMEM87AQ8NBN3 555 aa5.85□□□□□ -1.47
SCAF11-215ENST00000551391 TBC1D32Q96NH3 1257 aa5.85□□□□□ -1.47
SCAF11-215ENST00000551391 METTL5Q9NRN9 209 aaKnown RBP5.85□□□□□ -1.47
SCAF11-215ENST00000551391 TTF2Q9UNY4 1162 aaKnown RBP5.85□□□□□ -1.47
SCAF11-215ENST00000551391 LOC100289279A0A1B0GTE1 492 aa5.84□□□□□ -1.47
SCAF11-215ENST00000551391 ENC1O14682 589 aa5.84□□□□□ -1.47
SCAF11-215ENST00000551391 SCAMP3O14828 347 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms