RNA–Protein interactions for RNA: ENST00000551339.5

PFKM-222, Transcript of phosphofructokinase, muscle, human

TSL 4

Gene PFKM, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-222	ENST00000551339	AKAP11	Q9UKA4	1901 aa		11.93	□□□□□ -0.5
PFKM-222	ENST00000551339	MAP3K9	P80192	1104 aa		11.92	□□□□□ -0.5
PFKM-222	ENST00000551339	NOM1	Q5C9Z4	860 aa	Known RBP	11.92	□□□□□ -0.5
PFKM-222	ENST00000551339	CDC42EP5	Q6NZY7	148 aa		11.92	□□□□□ -0.5
PFKM-222	ENST00000551339	IFNL1	Q8IU54	200 aa		11.92	□□□□□ -0.5
PFKM-222	ENST00000551339	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
PFKM-222	ENST00000551339	SSH3	Q8TE77	659 aa		11.92	□□□□□ -0.5
PFKM-222	ENST00000551339	NEUROD6	Q96NK8	337 aa		11.92	□□□□□ -0.5
PFKM-222	ENST00000551339	R3HDML	Q9H3Y0	253 aa		11.92	□□□□□ -0.5
PFKM-222	ENST00000551339	ELP3	Q9H9T3	547 aa		11.92	□□□□□ -0.5
PFKM-222	ENST00000551339	PDS5A	Q29RF7	1337 aa	Known RBP	11.91	□□□□□ -0.5
PFKM-222	ENST00000551339	CCDC85C	A6NKD9	419 aa		11.91	□□□□□ -0.5
PFKM-222	ENST00000551339	GPR25	O00155	361 aa		11.91	□□□□□ -0.5
PFKM-222	ENST00000551339	ALDH1A1	P00352	501 aa		11.91	□□□□□ -0.5
PFKM-222	ENST00000551339	ZGPAT	Q8N5A5	531 aa	Known RBP	11.91	□□□□□ -0.5
PFKM-222	ENST00000551339	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.91	□□□□□ -0.5
PFKM-222	ENST00000551339	FAM151A	Q8WW52	585 aa		11.91	□□□□□ -0.5
PFKM-222	ENST00000551339	OPTN	Q96CV9	577 aa		11.91	□□□□□ -0.5
PFKM-222	ENST00000551339	C1orf115	Q9H7X2	142 aa		11.91	□□□□□ -0.5
PFKM-222	ENST00000551339	ZBTB40	Q9NUA8	1239 aa		11.91	□□□□□ -0.5
PFKM-222	ENST00000551339	USP40	Q9NVE5	1235 aa		11.91	□□□□□ -0.5
PFKM-222	ENST00000551339	TESPA1	A2RU30	521 aa	Predicted RBP	11.9	□□□□□ -0.5
PFKM-222	ENST00000551339	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
PFKM-222	ENST00000551339	NFIA	Q12857	509 aa		11.9	□□□□□ -0.5
PFKM-222	ENST00000551339	VGLL4	Q14135	290 aa		11.9	□□□□□ -0.5
PFKM-222	ENST00000551339	CTU1	Q7Z7A3	348 aa	Known RBP	11.9	□□□□□ -0.5
PFKM-222	ENST00000551339	CNKSR2	Q8WXI2	1034 aa		11.9	□□□□□ -0.5
PFKM-222	ENST00000551339	HOOK2	Q96ED9	719 aa		11.9	□□□□□ -0.5
PFKM-222	ENST00000551339	FAM163A	Q96GL9	167 aa	Predicted RBP	11.9	□□□□□ -0.5
PFKM-222	ENST00000551339	PTPN18	Q99952	460 aa		11.9	□□□□□ -0.5
PFKM-222	ENST00000551339	HMG20B	Q9P0W2	317 aa		11.9	□□□□□ -0.5
PFKM-222	ENST00000551339	FAM198A	Q9UFP1	575 aa		11.9	□□□□□ -0.5
PFKM-222	ENST00000551339	ABCF2	Q9UG63	623 aa		11.9	□□□□□ -0.5
PFKM-222	ENST00000551339	COG6	Q9Y2V7	657 aa		11.9	□□□□□ -0.5
PFKM-222	ENST00000551339	NOP58	Q9Y2X3	529 aa	Known RBP	11.9	□□□□□ -0.5
PFKM-222	ENST00000551339	SURF6	O75683	361 aa	Known RBP	11.89	□□□□□ -0.51
PFKM-222	ENST00000551339	TCP10	Q12799	353 aa		11.89	□□□□□ -0.51
PFKM-222	ENST00000551339	GORAB	Q5T7V8	394 aa		11.89	□□□□□ -0.51
PFKM-222	ENST00000551339	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.89	□□□□□ -0.51
PFKM-222	ENST00000551339	CEP85	Q6P2H3	762 aa		11.89	□□□□□ -0.51
PFKM-222	ENST00000551339	MIGA2	Q7L4E1	593 aa		11.89	□□□□□ -0.51
PFKM-222	ENST00000551339	ZFPM1	Q8IX07	1006 aa		11.89	□□□□□ -0.51
PFKM-222	ENST00000551339	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.89	□□□□□ -0.51
PFKM-222	ENST00000551339	MS4A4A	Q96JQ5	239 aa		11.89	□□□□□ -0.51
PFKM-222	ENST00000551339	GPR108	Q9NPR9	543 aa		11.89	□□□□□ -0.51
PFKM-222	ENST00000551339	CSAD	Q9Y600	493 aa		11.89	□□□□□ -0.51
PFKM-222	ENST00000551339	GAK	O14976	1311 aa		11.88	□□□□□ -0.51
PFKM-222	ENST00000551339	ARID4A	P29374	1257 aa	Predicted RBP	11.88	□□□□□ -0.51
PFKM-222	ENST00000551339	RGS19	P49795	217 aa		11.88	□□□□□ -0.51
PFKM-222	ENST00000551339	C20orf194	Q5TEA3	1177 aa		11.88	□□□□□ -0.51
PFKM-222	ENST00000551339	DCAF15	Q66K64	600 aa		11.88	□□□□□ -0.51
PFKM-222	ENST00000551339	PI16	Q6UXB8	463 aa		11.88	□□□□□ -0.51
PFKM-222	ENST00000551339	TBC1D9	Q6ZT07	1266 aa		11.88	□□□□□ -0.51
PFKM-222	ENST00000551339	ERICH6	Q7L0X2	663 aa		11.88	□□□□□ -0.51
PFKM-222	ENST00000551339	DZIP1	Q86YF9	867 aa	Known RBP	11.88	□□□□□ -0.51
PFKM-222	ENST00000551339	SPATA5	Q8NB90	893 aa		11.88	□□□□□ -0.51
PFKM-222	ENST00000551339	ZNF384	Q8TF68	577 aa		11.88	□□□□□ -0.51
PFKM-222	ENST00000551339	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.88	□□□□□ -0.51
PFKM-222	ENST00000551339	IDI2	Q9BXS1	227 aa		11.88	□□□□□ -0.51
PFKM-222	ENST00000551339	SNCAIP	Q9Y6H5	919 aa		11.88	□□□□□ -0.51
PFKM-222	ENST00000551339	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.88	□□□□□ -0.51
PFKM-222	ENST00000551339	GPR75-ASB3	A0A0A6YYF3	556 aa		11.87	□□□□□ -0.51
PFKM-222	ENST00000551339	SPDYE5	A6NIY4	337 aa		11.87	□□□□□ -0.51
PFKM-222	ENST00000551339	FKTN	O75072	461 aa		11.87	□□□□□ -0.51
PFKM-222	ENST00000551339	UQCRFS1P1	P0C7P4	283 aa		11.87	□□□□□ -0.51
PFKM-222	ENST00000551339	MCAM	P43121	646 aa		11.87	□□□□□ -0.51
PFKM-222	ENST00000551339	MECOM	Q03112	1051 aa		11.87	□□□□□ -0.51
PFKM-222	ENST00000551339	TNNI3K	Q59H18	835 aa		11.87	□□□□□ -0.51
PFKM-222	ENST00000551339	OTUD7B	Q6GQQ9	843 aa		11.87	□□□□□ -0.51
PFKM-222	ENST00000551339	SLF2	Q8IX21	1173 aa		11.87	□□□□□ -0.51
PFKM-222	ENST00000551339	OTUD5	Q96G74	571 aa		11.87	□□□□□ -0.51
PFKM-222	ENST00000551339	WRNIP1	Q96S55	665 aa		11.87	□□□□□ -0.51
PFKM-222	ENST00000551339	DBNDD2	Q9BQY9	259 aa		11.87	□□□□□ -0.51
PFKM-222	ENST00000551339	ZNF341	Q9BYN7	854 aa		11.87	□□□□□ -0.51
PFKM-222	ENST00000551339	ZNF112	Q9UJU3	913 aa		11.87	□□□□□ -0.51
PFKM-222	ENST00000551339	FPGT-TNNI3K	V9GXZ4	949 aa		11.87	□□□□□ -0.51
PFKM-222	ENST00000551339	MYH13	Q9UKX3	1938 aa		11.87	□□□□□ -0.51
PFKM-222	ENST00000551339	HMMR	O75330	724 aa		11.86	□□□□□ -0.51
PFKM-222	ENST00000551339	ENTPD3	O75355	529 aa		11.86	□□□□□ -0.51
PFKM-222	ENST00000551339	WDHD1	O75717	1129 aa	Predicted RBP	11.86	□□□□□ -0.51
PFKM-222	ENST00000551339	INPP5B	P32019	993 aa		11.86	□□□□□ -0.51
PFKM-222	ENST00000551339	BTD	P43251	543 aa		11.86	□□□□□ -0.51
PFKM-222	ENST00000551339	RGS3	P49796	1198 aa		11.86	□□□□□ -0.51
PFKM-222	ENST00000551339	GTF2A2	P52657	109 aa		11.86	□□□□□ -0.51
PFKM-222	ENST00000551339	RRP1	P56182	461 aa	Known RBP	11.86	□□□□□ -0.51
PFKM-222	ENST00000551339	OS9	Q13438	667 aa	Predicted RBP	11.86	□□□□□ -0.51
PFKM-222	ENST00000551339	PKN2	Q16513	984 aa	Known RBP	11.86	□□□□□ -0.51
PFKM-222	ENST00000551339	SH3BP5L	Q7L8J4	393 aa		11.86	□□□□□ -0.51
PFKM-222	ENST00000551339	ERO1B	Q86YB8	467 aa		11.86	□□□□□ -0.51
PFKM-222	ENST00000551339	BRI3BP	Q8WY22	251 aa		11.86	□□□□□ -0.51
PFKM-222	ENST00000551339	NSUN4	Q96CB9	384 aa	Known RBP	11.86	□□□□□ -0.51
PFKM-222	ENST00000551339	MROH7-TTC4	A0A0A0MT08	1334 aa		11.86	□□□□□ -0.51
PFKM-222	ENST00000551339	CCL15-CCL14	A0A0B4J2E2	113 aa		11.85	□□□□□ -0.51
PFKM-222	ENST00000551339	IRF6	O14896	467 aa		11.85	□□□□□ -0.51
PFKM-222	ENST00000551339	RHBDL3	P58872	404 aa		11.85	□□□□□ -0.51
PFKM-222	ENST00000551339	CRHR2	Q13324	411 aa		11.85	□□□□□ -0.51
PFKM-222	ENST00000551339	CCL15	Q16663	113 aa		11.85	□□□□□ -0.51
PFKM-222	ENST00000551339	HSP90AB4P	Q58FF6	505 aa		11.85	□□□□□ -0.51
PFKM-222	ENST00000551339	DDX4	Q9NQI0	724 aa	Known RBP	11.85	□□□□□ -0.51
PFKM-222	ENST00000551339	OTOF	Q9HC10	1997 aa		11.85	□□□□□ -0.51

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