RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 NBPF4Q96M43 638 aa8.16□□□□□ -1.1
PRDM4-206ENST00000550659 SLC30A3Q99726 388 aa8.16□□□□□ -1.1
PRDM4-206ENST00000550659 KDM5DQ9BY66 1539 aa8.16□□□□□ -1.1
PRDM4-206ENST00000550659 ZSWIM4Q9H7M6 989 aa8.16□□□□□ -1.1
PRDM4-206ENST00000550659 STRIP2Q9ULQ0 834 aa8.16□□□□□ -1.1
PRDM4-206ENST00000550659 ARID4BQ4LE39 1312 aaPredicted RBP8.15□□□□□ -1.1
PRDM4-206ENST00000550659 TLDC2A0PJX2 215 aa8.15□□□□□ -1.1
PRDM4-206ENST00000550659 F6X3S4 739 aa8.15□□□□□ -1.1
PRDM4-206ENST00000550659 SSBP05455 408 aaKnown RBP eCLIP8.15□□□□□ -1.1
PRDM4-206ENST00000550659 NASPP49321 788 aaPredicted RBP8.15□□□□□ -1.1
PRDM4-206ENST00000550659 DBN1Q16643 649 aa8.15□□□□□ -1.1
PRDM4-206ENST00000550659 RPS26P11Q5JNZ5 115 aaPredicted RBP8.15□□□□□ -1.1
PRDM4-206ENST00000550659 FAM182BQ5T319 152 aa8.15□□□□□ -1.1
PRDM4-206ENST00000550659 TPTE2Q6XPS3 522 aa8.15□□□□□ -1.1
PRDM4-206ENST00000550659 CKAP2LQ8IYA6 745 aa8.15□□□□□ -1.1
PRDM4-206ENST00000550659 SPACA7Q96KW9 195 aa8.15□□□□□ -1.1
PRDM4-206ENST00000550659 NSUN5Q96P11 429 aaKnown RBP8.15□□□□□ -1.1
PRDM4-206ENST00000550659 PIF1Q9H611 641 aa8.15□□□□□ -1.1
PRDM4-206ENST00000550659 ATXN7L1Q9ULK2 861 aaPredicted RBP8.15□□□□□ -1.1
PRDM4-206ENST00000550659 SUPT16HQ9Y5B9 1047 aaKnown RBP8.15□□□□□ -1.1
PRDM4-206ENST00000550659 FAM135AQ9P2D6 1515 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 NUP155O75694 1391 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 NFKBIEO00221 500 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 GREM1O60565 184 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 CELA3AP09093 270 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 GARTP22102 1010 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 SOX9P48436 509 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 GPLD1P80108 840 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 LMNB2Q03252 620 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 NFX1Q12986 1120 aaKnown RBP8.14□□□□□ -1.11
PRDM4-206ENST00000550659 NEUROD1Q13562 356 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 MAP3K11Q16584 847 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 FBXL19Q6PCT2 694 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 TRPM4Q8TD43 1214 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 NXPE3Q969Y0 559 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 ABHD17AQ96GS6 310 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 NECAB3Q96P71 396 aaPredicted RBP8.14□□□□□ -1.11
PRDM4-206ENST00000550659 ATP13A2Q9NQ11 1180 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 EFR3BQ9Y2G0 817 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 E9PCH4 1651 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 CAMSAP1Q5T5Y3 1602 aa8.14□□□□□ -1.11
PRDM4-206ENST00000550659 DHX57Q6P158 1386 aaKnown RBP8.13□□□□□ -1.11
PRDM4-206ENST00000550659 FER1L4A9Z1Z3 1794 aa8.13□□□□□ -1.11
PRDM4-206ENST00000550659 A0A096LPE4 126 aa8.13□□□□□ -1.11
PRDM4-206ENST00000550659 A0A1W2PPZ6 126 aa8.13□□□□□ -1.11
PRDM4-206ENST00000550659 ENC1O14682 589 aa8.13□□□□□ -1.11
PRDM4-206ENST00000550659 CD33P20138 364 aa8.13□□□□□ -1.11
PRDM4-206ENST00000550659 RPS26P62854 115 aaKnown RBP8.13□□□□□ -1.11
PRDM4-206ENST00000550659 SPRED3Q2MJR0 410 aa8.13□□□□□ -1.11
PRDM4-206ENST00000550659 AGMOQ6ZNB7 445 aa8.13□□□□□ -1.11
PRDM4-206ENST00000550659 CCDC155Q8N6L0 562 aa8.13□□□□□ -1.11
PRDM4-206ENST00000550659 ZNF576Q9H609 170 aa8.13□□□□□ -1.11
PRDM4-206ENST00000550659 GINM1Q9NU53 330 aa8.13□□□□□ -1.11
PRDM4-206ENST00000550659 TLR6Q9Y2C9 796 aa8.13□□□□□ -1.11
PRDM4-206ENST00000550659 RIMS1Q86UR5 1692 aaKnown RBP8.13□□□□□ -1.11
PRDM4-206ENST00000550659 TET3O43151 1660 aa8.12□□□□□ -1.11
PRDM4-206ENST00000550659 LOC102724428A0A0B4J2F2 783 aa8.12□□□□□ -1.11
PRDM4-206ENST00000550659 SOBPA7XYQ1 873 aa8.12□□□□□ -1.11
PRDM4-206ENST00000550659 METTL12A8MUP2 240 aa8.12□□□□□ -1.11
PRDM4-206ENST00000550659 TRPA1O75762 1119 aa8.12□□□□□ -1.11
PRDM4-206ENST00000550659 PF4P02776 101 aa8.12□□□□□ -1.11
PRDM4-206ENST00000550659 NCLP19338 710 aaKnown RBP8.12□□□□□ -1.11
PRDM4-206ENST00000550659 CEBPAP49715 358 aaPredicted RBP8.12□□□□□ -1.11
PRDM4-206ENST00000550659 SIK1P57059 783 aa8.12□□□□□ -1.11
PRDM4-206ENST00000550659 CAMK2GQ13555 558 aaPredicted RBP8.12□□□□□ -1.11
PRDM4-206ENST00000550659 RAB44Q7Z6P3 723 aaPredicted RBP8.12□□□□□ -1.11
PRDM4-206ENST00000550659 ZNF837Q96EG3 531 aaPredicted RBP8.12□□□□□ -1.11
PRDM4-206ENST00000550659 ZNF408Q9H9D4 720 aa8.12□□□□□ -1.11
PRDM4-206ENST00000550659 SEC31BQ9NQW1 1179 aa8.12□□□□□ -1.11
PRDM4-206ENST00000550659 PHF24Q9UPV7 400 aa8.12□□□□□ -1.11
PRDM4-206ENST00000550659 TBX22Q9Y458 520 aa8.12□□□□□ -1.11
PRDM4-206ENST00000550659 EFCAB6Q5THR3 1501 aa8.12□□□□□ -1.11
PRDM4-206ENST00000550659 LMTK2Q8IWU2 1503 aa8.12□□□□□ -1.11
PRDM4-206ENST00000550659 PLA2R1Q13018 1463 aa8.12□□□□□ -1.11
PRDM4-206ENST00000550659 C3P01024 1663 aa8.11□□□□□ -1.11
PRDM4-206ENST00000550659 CFAP65Q6ZU64 1925 aaKnown RBP8.11□□□□□ -1.11
PRDM4-206ENST00000550659 PDE2AO00408 941 aaPredicted RBP8.11□□□□□ -1.11
PRDM4-206ENST00000550659 NRG2O14511 850 aaPredicted RBP8.11□□□□□ -1.11
PRDM4-206ENST00000550659 FAM160A1Q05DH4 1040 aa8.11□□□□□ -1.11
PRDM4-206ENST00000550659 SERINC3Q13530 473 aa8.11□□□□□ -1.11
PRDM4-206ENST00000550659 NFE2L2Q16236 605 aa8.11□□□□□ -1.11
PRDM4-206ENST00000550659 PCSK7Q16549 785 aa8.11□□□□□ -1.11
PRDM4-206ENST00000550659 SNAP47Q5SQN1 464 aa8.11□□□□□ -1.11
PRDM4-206ENST00000550659 TTBK2Q6IQ55 1244 aa8.11□□□□□ -1.11
PRDM4-206ENST00000550659 HHIPQ96QV1 700 aa8.11□□□□□ -1.11
PRDM4-206ENST00000550659 MPHOSPH9Q99550 1183 aa8.11□□□□□ -1.11
PRDM4-206ENST00000550659 PBX4Q9BYU1 374 aa8.11□□□□□ -1.11
PRDM4-206ENST00000550659 ZC3H13Q5T200 1668 aaKnown RBP8.11□□□□□ -1.11
PRDM4-206ENST00000550659 NPATQ14207 1427 aa8.11□□□□□ -1.11
PRDM4-206ENST00000550659 UGGT1Q9NYU2 1555 aa8.1□□□□□ -1.11
PRDM4-206ENST00000550659 ZBTB42B2RXF5 422 aa8.1□□□□□ -1.11
PRDM4-206ENST00000550659 TFE3P19532 575 aaPredicted RBP8.1□□□□□ -1.11
PRDM4-206ENST00000550659 FGFR3P22607 806 aa8.1□□□□□ -1.11
PRDM4-206ENST00000550659 ZNF746Q6NUN9 644 aaPredicted RBP8.1□□□□□ -1.11
PRDM4-206ENST00000550659 CCDC84Q86UT8 332 aaPredicted RBP8.1□□□□□ -1.11
PRDM4-206ENST00000550659 GOLM1Q8NBJ4 401 aa8.1□□□□□ -1.11
PRDM4-206ENST00000550659 MKL1Q969V6 931 aa8.1□□□□□ -1.11
PRDM4-206ENST00000550659 UBP1Q9NZI7 540 aa8.1□□□□□ -1.11
PRDM4-206ENST00000550659 ROBO2Q9HCK4 1378 aa8.1□□□□□ -1.11
PRDM4-206ENST00000550659 WASHC2CQ9Y4E1 1318 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms