RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 SKAP1Q86WV1 359 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 TSNARE1Q96NA8 513 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 KCNK9Q9NPC2 374 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 DDX21Q9NR30 783 aaKnown RBP eCLIP9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 ESRRBO95718 433 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 TCP1P17987 556 aaKnown RBP9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 SARM1Q6SZW1 724 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 CCDC43Q96MW1 224 aaKnown RBP9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 SYNCQ9H7C4 482 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 LRRIQ3A6PVS8 624 aaPredicted RBP9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 E7ENQ6 273 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 KMT5BQ4FZB7 885 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 RCSD1Q6JBY9 416 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 LCA5Q86VQ0 697 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 RAB34Q9BZG1 259 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 NDUFA13Q9P0J0 144 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 STOML1Q9UBI4 398 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 A0A0G2JS52 829 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 BIN1O00499 593 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 PHBP35232 272 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 ANKRD20A4Q4UJ75 823 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 ANKRD20A8PQ5CZ79 823 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 ANKRD20A2Q5SQ80 823 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 ANKRD20A1Q5TYW2 823 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 RUNDC3BQ96NL0 473 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 NOX5Q96PH1 765 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 HAUS4Q9H6D7 363 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 PPANQ9NQ55 473 aaKnown RBP9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 WWC3Q9ULE0 1092 aa9.8□□□□□ -0.84
PPFIA2-220ENST00000550584 RPRD2Q5VT52 1461 aaKnown RBP9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 SEC24BO95487 1268 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 GSTA2P09210 222 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 SDSP20132 328 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 NOP14P78316 857 aaKnown RBP9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 CASP8Q14790 479 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 APBB1IPQ7Z5R6 666 aaPredicted RBP9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 TMEM87AQ8NBN3 555 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 PARD6BQ9BYG5 372 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 PARVBQ9HBI1 364 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 RNF216Q9NWF9 866 aaPredicted RBP9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 TCEAL9Q9UHQ7 104 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 CCDC169A6NNP5 214 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 SPTLC2O15270 562 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 HARSP12081 509 aaKnown RBP9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 NOP2P46087 812 aaKnown RBP9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 INF2Q27J81 1249 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 GPT2Q8TD30 523 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 SSH1Q8WYL5 1049 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 ANKRD50Q9ULJ7 1429 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 LMOD1P29536 600 aaPredicted RBP9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 EMBQ6PCB8 327 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 CCDC13Q8IYE1 715 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 ZBTB9Q96C00 473 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 KIF24Q5T7B8 1368 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 BLMP54132 1417 aaPredicted RBP9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 PSMA7O14818 248 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 HNRNPCL1O60812 293 aaKnown RBP9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 TMCC1O94876 653 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 IGSF22Q8N9C0 903 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 FGFR1OP2Q9NVK5 253 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 IL1RAPL1Q9NZN1 696 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 STK38LQ9Y2H1 464 aa9.79□□□□□ -0.84
PPFIA2-220ENST00000550584 MGEA5O60502 916 aa9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 EIF3BP55884 814 aaKnown RBP9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 SSRP1Q08945 709 aaKnown RBP9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 SLC44A4Q53GD3 710 aa9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 HYOU1Q9Y4L1 999 aa9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 PCDHB15Q9Y5E8 787 aa9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 RUSC2Q8N2Y8 1516 aa9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 SUPT6HQ7KZ85 1726 aaKnown RBP9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 MEFVO15553 781 aaPredicted RBP9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 LMNB1P20700 586 aa9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 CADPSQ9ULU8 1353 aa9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 PIK3C2GO75747 1445 aa9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 ABCD1P33897 745 aa9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 ST5P78524 1137 aa9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 PRPF4BQ13523 1007 aaKnown RBP9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 DENND2CQ68D51 928 aa9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 SAMD1Q6SPF0 538 aaPredicted RBP9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 SYCE1Q8N0S2 351 aa9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 DAPK1P53355 1430 aa9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 GLE1Q53GS7 698 aaKnown RBP9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 MAP7D3Q8IWC1 876 aa9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 FAM186BQ8IYM0 893 aa9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 ZGPATQ8N5A5 531 aaKnown RBP9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 ZCRB1Q8TBF4 217 aaKnown RBP9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 TSR2Q969E8 191 aaKnown RBP9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 HMGXB3Q12766 1538 aa9.78□□□□□ -0.84
PPFIA2-220ENST00000550584 AMPHP49418 695 aa9.77□□□□□ -0.84
PPFIA2-220ENST00000550584 TPD52P55327 224 aaPredicted RBP9.77□□□□□ -0.84
PPFIA2-220ENST00000550584 RBM6P78332 1123 aaKnown RBP9.77□□□□□ -0.84
PPFIA2-220ENST00000550584 TEFQ10587 303 aa9.77□□□□□ -0.84
PPFIA2-220ENST00000550584 CETN1Q12798 172 aa9.77□□□□□ -0.84
PPFIA2-220ENST00000550584 CCDC93Q567U6 631 aa9.77□□□□□ -0.84
PPFIA2-220ENST00000550584 IQUBQ8NA54 791 aa9.77□□□□□ -0.84
PPFIA2-220ENST00000550584 KLHL29Q96CT2 875 aa9.77□□□□□ -0.84
PPFIA2-220ENST00000550584 CSRNP2Q9H175 543 aa9.77□□□□□ -0.84
PPFIA2-220ENST00000550584 NAIPQ13075 1403 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms