RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 PRDX5P30044 214 aa27.05■■□□□ 1.92
SMARCC2-210ENST00000550519 ZCCHC17Q9NP64 241 aaKnown RBP27.05■■□□□ 1.92
SMARCC2-210ENST00000550519 PPIL2Q13356 520 aa27.04■■□□□ 1.92
SMARCC2-210ENST00000550519 SNAPC2Q13487 334 aa27.04■■□□□ 1.92
SMARCC2-210ENST00000550519 ARHGEF6Q15052 776 aa27.04■■□□□ 1.92
SMARCC2-210ENST00000550519 DIXDC1Q155Q3 683 aa27.04■■□□□ 1.92
SMARCC2-210ENST00000550519 CDC42EP5Q6NZY7 148 aa27.04■■□□□ 1.92
SMARCC2-210ENST00000550519 ZNF341Q9BYN7 854 aa27.04■■□□□ 1.92
SMARCC2-210ENST00000550519 API5Q9BZZ5 524 aaKnown RBP27.04■■□□□ 1.92
SMARCC2-210ENST00000550519 GNL3LQ9NVN8 582 aaKnown RBP27.04■■□□□ 1.92
SMARCC2-210ENST00000550519 TLR2O60603 784 aa27.03■■□□□ 1.92
SMARCC2-210ENST00000550519 IL15P40933 162 aaPredicted RBP27.03■■□□□ 1.92
SMARCC2-210ENST00000550519 MIGA2Q7L4E1 593 aa27.03■■□□□ 1.92
SMARCC2-210ENST00000550519 SALL1Q9NSC2 1324 aa27.03■■□□□ 1.92
SMARCC2-210ENST00000550519 HDAC5Q9UQL6 1122 aa27.03■■□□□ 1.92
SMARCC2-210ENST00000550519 LRRFIP2Q9Y608 721 aaKnown RBP27.03■■□□□ 1.92
SMARCC2-210ENST00000550519 BTBD19C9JJ37 291 aa27.02■■□□□ 1.92
SMARCC2-210ENST00000550519 ZBTB22O15209 634 aa27.02■■□□□ 1.92
SMARCC2-210ENST00000550519 INPP5BP32019 993 aa27.02■■□□□ 1.92
SMARCC2-210ENST00000550519 PPATQ06203 517 aa27.02■■□□□ 1.92
SMARCC2-210ENST00000550519 ZNF112Q9UJU3 913 aa27.02■■□□□ 1.92
SMARCC2-210ENST00000550519 SEMA3EO15041 775 aa27.01■■□□□ 1.91
SMARCC2-210ENST00000550519 WDHD1O75717 1129 aaPredicted RBP27.01■■□□□ 1.91
SMARCC2-210ENST00000550519 LDHBP07195 334 aaKnown RBP27.01■■□□□ 1.91
SMARCC2-210ENST00000550519 PHKA1P46020 1223 aa27.01■■□□□ 1.91
SMARCC2-210ENST00000550519 NFIAQ12857 509 aa27.01■■□□□ 1.91
SMARCC2-210ENST00000550519 COPRSQ9NQ92 184 aa27.01■■□□□ 1.91
SMARCC2-210ENST00000550519 DENND2AQ9ULE3 1009 aa27.01■■□□□ 1.91
SMARCC2-210ENST00000550519 PA2G4Q9UQ80 394 aaKnown RBP27.01■■□□□ 1.91
SMARCC2-210ENST00000550519 KIAA0100Q14667 2235 aaKnown RBP27.01■■□□□ 1.91
SMARCC2-210ENST00000550519 CENPFP49454 3210 aa27.01■■□□□ 1.91
SMARCC2-210ENST00000550519 TCP10Q12799 353 aa27■■□□□ 1.91
SMARCC2-210ENST00000550519 FAM198AQ9UFP1 575 aa27■■□□□ 1.91
SMARCC2-210ENST00000550519 ZNF333Q96JL9 665 aa26.99■■□□□ 1.91
SMARCC2-210ENST00000550519 MEIS3Q99687 375 aa26.99■■□□□ 1.91
SMARCC2-210ENST00000550519 PTCH2Q9Y6C5 1203 aa26.99■■□□□ 1.91
SMARCC2-210ENST00000550519 USP40Q9NVE5 1235 aa26.98■■□□□ 1.91
SMARCC2-210ENST00000550519 MYH13Q9UKX3 1938 aa26.98■■□□□ 1.91
SMARCC2-210ENST00000550519 RARSP54136 660 aaKnown RBP26.97■■□□□ 1.91
SMARCC2-210ENST00000550519 CCDC102BQ68D86 513 aa26.97■■□□□ 1.91
SMARCC2-210ENST00000550519 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.97■■□□□ 1.91
SMARCC2-210ENST00000550519 KCNH4Q9UQ05 1017 aa26.97■■□□□ 1.91
SMARCC2-210ENST00000550519 MKI67P46013 3256 aaKnown RBP26.97■■□□□ 1.91
SMARCC2-210ENST00000550519 EN2P19622 333 aaPredicted RBP26.96■■□□□ 1.91
SMARCC2-210ENST00000550519 ADORA1P30542 326 aa26.96■■□□□ 1.91
SMARCC2-210ENST00000550519 LACTBP83111 547 aaPredicted RBP26.96■■□□□ 1.91
SMARCC2-210ENST00000550519 NOL9Q5SY16 702 aaKnown RBP26.96■■□□□ 1.91
SMARCC2-210ENST00000550519 ARHGAP45Q92619 1136 aa26.96■■□□□ 1.91
SMARCC2-210ENST00000550519 ARHGAP39Q9C0H5 1083 aa26.96■■□□□ 1.91
SMARCC2-210ENST00000550519 RBBP6Q7Z6E9 1792 aaKnown RBP26.95■■□□□ 1.9
SMARCC2-210ENST00000550519 SLC9C1Q4G0N8 1177 aa26.95■■□□□ 1.9
SMARCC2-210ENST00000550519 ANKRD23Q86SG2 305 aa26.95■■□□□ 1.9
SMARCC2-210ENST00000550519 NBPF11Q86T75 865 aa26.95■■□□□ 1.9
SMARCC2-210ENST00000550519 ZFPM1Q8IX07 1006 aa26.95■■□□□ 1.9
SMARCC2-210ENST00000550519 KIF22Q14807 665 aa26.94■■□□□ 1.9
SMARCC2-210ENST00000550519 C17orf99Q6UX52 265 aa26.94■■□□□ 1.9
SMARCC2-210ENST00000550519 ZGPATQ8N5A5 531 aaKnown RBP26.94■■□□□ 1.9
SMARCC2-210ENST00000550519 TMEM106CQ9BVX2 250 aa26.94■■□□□ 1.9
SMARCC2-210ENST00000550519 IDI2Q9BXS1 227 aa26.94■■□□□ 1.9
SMARCC2-210ENST00000550519 PCDH10Q9P2E7 1040 aa26.94■■□□□ 1.9
SMARCC2-210ENST00000550519 GAKO14976 1311 aa26.93■■□□□ 1.9
SMARCC2-210ENST00000550519 PDS5AQ29RF7 1337 aaKnown RBP26.93■■□□□ 1.9
SMARCC2-210ENST00000550519 GNRH1P01148 92 aa26.93■■□□□ 1.9
SMARCC2-210ENST00000550519 TIMM10P62072 90 aa26.93■■□□□ 1.9
SMARCC2-210ENST00000550519 RASGRF1Q13972 1273 aa26.93■■□□□ 1.9
SMARCC2-210ENST00000550519 ATRNL1Q5VV63 1379 aa26.93■■□□□ 1.9
SMARCC2-210ENST00000550519 GNAI3P08754 354 aa26.92■■□□□ 1.9
SMARCC2-210ENST00000550519 MTX1Q13505 466 aa26.92■■□□□ 1.9
SMARCC2-210ENST00000550519 MOGSQ13724 837 aa26.92■■□□□ 1.9
SMARCC2-210ENST00000550519 PDHXO00330 501 aa26.91■■□□□ 1.9
SMARCC2-210ENST00000550519 ENTPD3O75355 529 aa26.91■■□□□ 1.9
SMARCC2-210ENST00000550519 FAM163AQ96GL9 167 aaPredicted RBP26.91■■□□□ 1.9
SMARCC2-210ENST00000550519 ADGRA2Q96PE1 1338 aa26.9■■□□□ 1.9
SMARCC2-210ENST00000550519 BRCA2P51587 3418 aa26.9■■□□□ 1.9
SMARCC2-210ENST00000550519 RFX7Q2KHR2 1363 aa26.9■■□□□ 1.9
SMARCC2-210ENST00000550519 A0A1B0GUL7 405 aa26.9■■□□□ 1.9
SMARCC2-210ENST00000550519 PHF20L1A8MW92 1017 aa26.9■■□□□ 1.9
SMARCC2-210ENST00000550519 CCER2I3L3R5 266 aa26.9■■□□□ 1.9
SMARCC2-210ENST00000550519 SRGAP3O43295 1099 aa26.9■■□□□ 1.9
SMARCC2-210ENST00000550519 RGS3P49796 1198 aa26.9■■□□□ 1.9
SMARCC2-210ENST00000550519 CPA4Q9UI42 421 aa26.9■■□□□ 1.9
SMARCC2-210ENST00000550519 CXCL11O14625 94 aa26.89■■□□□ 1.9
SMARCC2-210ENST00000550519 PRMT2P55345 433 aa26.89■■□□□ 1.9
SMARCC2-210ENST00000550519 TFCP2Q12800 502 aa26.89■■□□□ 1.9
SMARCC2-210ENST00000550519 GCC1Q96CN9 775 aa26.89■■□□□ 1.9
SMARCC2-210ENST00000550519 XAGE2Q96GT9 111 aa26.89■■□□□ 1.9
SMARCC2-210ENST00000550519 AKAP2Q9Y2D5 859 aa26.89■■□□□ 1.9
SMARCC2-210ENST00000550519 CTGFP29279 349 aa26.88■■□□□ 1.89
SMARCC2-210ENST00000550519 MAP3K10Q02779 954 aa26.88■■□□□ 1.89
SMARCC2-210ENST00000550519 SH3BP5LQ7L8J4 393 aa26.88■■□□□ 1.89
SMARCC2-210ENST00000550519 DZIP1Q86YF9 867 aaKnown RBP26.88■■□□□ 1.89
SMARCC2-210ENST00000550519 SLF2Q8IX21 1173 aa26.88■■□□□ 1.89
SMARCC2-210ENST00000550519 ABCF2Q9UG63 623 aa26.88■■□□□ 1.89
SMARCC2-210ENST00000550519 MVPQ14764 893 aaKnown RBP26.87■■□□□ 1.89
SMARCC2-210ENST00000550519 SPTY2D1Q68D10 685 aaPredicted RBP26.87■■□□□ 1.89
SMARCC2-210ENST00000550519 SH3TC2Q8TF17 1288 aa26.87■■□□□ 1.89
SMARCC2-210ENST00000550519 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.87■■□□□ 1.89
SMARCC2-210ENST00000550519 ZSWIM8A7E2V4 1837 aa26.86■■□□□ 1.89
SMARCC2-210ENST00000550519 SLC4A8Q2Y0W8 1093 aa26.86■■□□□ 1.89
SMARCC2-210ENST00000550519 GPAT2Q6NUI2 795 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms