RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 FAM198AQ9UFP1 575 aa19.75■□□□□ 0.75
COX6A1-203ENST00000550009 SUGT1Q9Y2Z0 365 aa19.75■□□□□ 0.75
COX6A1-203ENST00000550009 LDHBP07195 334 aaKnown RBP19.74■□□□□ 0.75
COX6A1-203ENST00000550009 TNNI2P48788 182 aa19.74■□□□□ 0.75
COX6A1-203ENST00000550009 CTU1Q7Z7A3 348 aaKnown RBP19.74■□□□□ 0.75
COX6A1-203ENST00000550009 MS4A4AQ96JQ5 239 aa19.74■□□□□ 0.75
COX6A1-203ENST00000550009 NEUROD6Q96NK8 337 aa19.74■□□□□ 0.75
COX6A1-203ENST00000550009 DENND2AQ9ULE3 1009 aa19.74■□□□□ 0.75
COX6A1-203ENST00000550009 SNCAIPQ9Y6H5 919 aa19.74■□□□□ 0.75
COX6A1-203ENST00000550009 MANSC4A6NHS7 340 aaPredicted RBP19.73■□□□□ 0.75
COX6A1-203ENST00000550009 ZBTB48P10074 688 aaPredicted RBP19.73■□□□□ 0.75
COX6A1-203ENST00000550009 MAP3K9P80192 1104 aa19.73■□□□□ 0.75
COX6A1-203ENST00000550009 TBC1D9Q6ZT07 1266 aa19.73■□□□□ 0.75
COX6A1-203ENST00000550009 MAST3O60307 1309 aa19.73■□□□□ 0.75
COX6A1-203ENST00000550009 SALL1Q9NSC2 1324 aa19.73■□□□□ 0.75
COX6A1-203ENST00000550009 PHIPQ8WWQ0 1821 aa19.72■□□□□ 0.75
COX6A1-203ENST00000550009 INPP5BP32019 993 aa19.72■□□□□ 0.75
COX6A1-203ENST00000550009 SOX10P56693 466 aa19.72■□□□□ 0.75
COX6A1-203ENST00000550009 POLA2Q14181 598 aa19.72■□□□□ 0.75
COX6A1-203ENST00000550009 FAM83AQ86UY5 434 aa19.72■□□□□ 0.75
COX6A1-203ENST00000550009 PANK1Q8TE04 598 aa19.72■□□□□ 0.75
COX6A1-203ENST00000550009 BRI3BPQ8WY22 251 aa19.72■□□□□ 0.75
COX6A1-203ENST00000550009 OTUD5Q96G74 571 aa19.72■□□□□ 0.75
COX6A1-203ENST00000550009 USP40Q9NVE5 1235 aa19.72■□□□□ 0.75
COX6A1-203ENST00000550009 GNL3LQ9NVN8 582 aaKnown RBP19.72■□□□□ 0.75
COX6A1-203ENST00000550009 ABCF2Q9UG63 623 aa19.72■□□□□ 0.75
COX6A1-203ENST00000550009 HDAC5Q9UQL6 1122 aa19.72■□□□□ 0.75
COX6A1-203ENST00000550009 ZBED9Q6R2W3 1325 aa19.72■□□□□ 0.75
COX6A1-203ENST00000550009 PTPRFP10586 1907 aa19.71■□□□□ 0.75
COX6A1-203ENST00000550009 CRHR2Q13324 411 aa19.71■□□□□ 0.75
COX6A1-203ENST00000550009 ITPRIPQ8IWB1 547 aa19.71■□□□□ 0.75
COX6A1-203ENST00000550009 WRNIP1Q96S55 665 aa19.71■□□□□ 0.75
COX6A1-203ENST00000550009 DDX4Q9NQI0 724 aaKnown RBP19.71■□□□□ 0.75
COX6A1-203ENST00000550009 TMOD2Q9NZR1 351 aa19.71■□□□□ 0.75
COX6A1-203ENST00000550009 HMG20BQ9P0W2 317 aa19.71■□□□□ 0.75
COX6A1-203ENST00000550009 ZBTB7BO15156 539 aaPredicted RBP19.7■□□□□ 0.74
COX6A1-203ENST00000550009 SH3BP5LQ7L8J4 393 aa19.7■□□□□ 0.74
COX6A1-203ENST00000550009 CFHR5Q9BXR6 569 aa19.7■□□□□ 0.74
COX6A1-203ENST00000550009 ATAD5Q96QE3 1844 aa19.69■□□□□ 0.74
COX6A1-203ENST00000550009 TESPA1A2RU30 521 aaPredicted RBP19.69■□□□□ 0.74
COX6A1-203ENST00000550009 SEMA3EO15041 775 aa19.69■□□□□ 0.74
COX6A1-203ENST00000550009 FKTNO75072 461 aa19.69■□□□□ 0.74
COX6A1-203ENST00000550009 MCAMP43121 646 aa19.69■□□□□ 0.74
COX6A1-203ENST00000550009 ATP8B2P98198 1209 aa19.69■□□□□ 0.74
COX6A1-203ENST00000550009 FKBP1CQ5VVH2 108 aa19.69■□□□□ 0.74
COX6A1-203ENST00000550009 FAM43AQ8N2R8 423 aa19.69■□□□□ 0.74
COX6A1-203ENST00000550009 FAM151AQ8WW52 585 aa19.69■□□□□ 0.74
COX6A1-203ENST00000550009 HPS5Q9UPZ3 1129 aa19.69■□□□□ 0.74
COX6A1-203ENST00000550009 GAKO14976 1311 aa19.69■□□□□ 0.74
COX6A1-203ENST00000550009 SIPA1L1O43166 1804 aa19.69■□□□□ 0.74
COX6A1-203ENST00000550009 RFX7Q2KHR2 1363 aa19.69■□□□□ 0.74
COX6A1-203ENST00000550009 UNCXA6NJT0 531 aa19.68■□□□□ 0.74
COX6A1-203ENST00000550009 RGS3P49796 1198 aa19.68■□□□□ 0.74
COX6A1-203ENST00000550009 MECOMQ03112 1051 aa19.68■□□□□ 0.74
COX6A1-203ENST00000550009 G3BP1Q13283 466 aaKnown RBP eCLIP19.68■□□□□ 0.74
COX6A1-203ENST00000550009 SSH3Q8TE77 659 aa19.68■□□□□ 0.74
COX6A1-203ENST00000550009 SNRKQ9NRH2 765 aa19.68■□□□□ 0.74
COX6A1-203ENST00000550009 TLR7Q9NYK1 1049 aaKnown RBP19.68■□□□□ 0.74
COX6A1-203ENST00000550009 AKAP2Q9Y2D5 859 aa19.68■□□□□ 0.74
COX6A1-203ENST00000550009 RPAP1Q9BWH6 1393 aaPredicted RBP19.68■□□□□ 0.74
COX6A1-203ENST00000550009 FOCADQ5VW36 1801 aa19.67■□□□□ 0.74
COX6A1-203ENST00000550009 DOCK1Q14185 1865 aa19.67■□□□□ 0.74
COX6A1-203ENST00000550009 CCL15-CCL14A0A0B4J2E2 113 aa19.67■□□□□ 0.74
COX6A1-203ENST00000550009 CCL15Q16663 113 aa19.67■□□□□ 0.74
COX6A1-203ENST00000550009 DZIP1Q86YF9 867 aaKnown RBP19.67■□□□□ 0.74
COX6A1-203ENST00000550009 FTSJ3Q8IY81 847 aaKnown RBP19.67■□□□□ 0.74
COX6A1-203ENST00000550009 CD99L2Q8TCZ2 262 aa19.67■□□□□ 0.74
COX6A1-203ENST00000550009 DBNDD2Q9BQY9 259 aa19.67■□□□□ 0.74
COX6A1-203ENST00000550009 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.67■□□□□ 0.74
COX6A1-203ENST00000550009 CSADQ9Y600 493 aa19.67■□□□□ 0.74
COX6A1-203ENST00000550009 ATRNL1Q5VV63 1379 aa19.67■□□□□ 0.74
COX6A1-203ENST00000550009 MAST2Q6P0Q8 1798 aa19.67■□□□□ 0.74
COX6A1-203ENST00000550009 DDTLA6NHG4 134 aaPredicted RBP19.66■□□□□ 0.74
COX6A1-203ENST00000550009 SPDYE5A6NIY4 337 aa19.66■□□□□ 0.74
COX6A1-203ENST00000550009 IRF6O14896 467 aa19.66■□□□□ 0.74
COX6A1-203ENST00000550009 WDHD1O75717 1129 aaPredicted RBP19.66■□□□□ 0.74
COX6A1-203ENST00000550009 ARID4AP29374 1257 aaPredicted RBP19.66■□□□□ 0.74
COX6A1-203ENST00000550009 BTDP43251 543 aa19.66■□□□□ 0.74
COX6A1-203ENST00000550009 RGS19P49795 217 aa19.66■□□□□ 0.74
COX6A1-203ENST00000550009 MVPQ14764 893 aaKnown RBP19.66■□□□□ 0.74
COX6A1-203ENST00000550009 SPATA5Q8NB90 893 aa19.66■□□□□ 0.74
COX6A1-203ENST00000550009 SURF6O75683 361 aaKnown RBP19.65■□□□□ 0.74
COX6A1-203ENST00000550009 INHBEP58166 350 aa19.65■□□□□ 0.74
COX6A1-203ENST00000550009 PICALMQ13492 652 aa19.65■□□□□ 0.74
COX6A1-203ENST00000550009 TNNI3KQ59H18 835 aa19.65■□□□□ 0.74
COX6A1-203ENST00000550009 NOM1Q5C9Z4 860 aaKnown RBP19.65■□□□□ 0.74
COX6A1-203ENST00000550009 NDUFB9Q9Y6M9 179 aa19.65■□□□□ 0.74
COX6A1-203ENST00000550009 FPGT-TNNI3KV9GXZ4 949 aa19.65■□□□□ 0.74
COX6A1-203ENST00000550009 FAM196BA6NMK8 535 aa19.64■□□□□ 0.73
COX6A1-203ENST00000550009 BTBD19C9JJ37 291 aa19.64■□□□□ 0.73
COX6A1-203ENST00000550009 ZBTB22O15209 634 aa19.64■□□□□ 0.73
COX6A1-203ENST00000550009 ECM2O94769 699 aaPredicted RBP19.64■□□□□ 0.73
COX6A1-203ENST00000550009 ALDH1A1P00352 501 aa19.64■□□□□ 0.73
COX6A1-203ENST00000550009 RHBDL3P58872 404 aa19.64■□□□□ 0.73
COX6A1-203ENST00000550009 GORABQ5T7V8 394 aa19.64■□□□□ 0.73
COX6A1-203ENST00000550009 ERICH6Q7L0X2 663 aa19.64■□□□□ 0.73
COX6A1-203ENST00000550009 NSUN4Q96CB9 384 aaKnown RBP19.64■□□□□ 0.73
COX6A1-203ENST00000550009 ZNF341Q9BYN7 854 aa19.64■□□□□ 0.73
COX6A1-203ENST00000550009 ZNF112Q9UJU3 913 aa19.64■□□□□ 0.73
COX6A1-203ENST00000550009 MROH7-TTC4A0A0A0MT08 1334 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms