RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 USP50Q70EL3 339 aaPredicted RBP11.73□□□□□ -0.53
SMARCD1-206ENST00000549274 MICALL2Q8IY33 904 aa11.73□□□□□ -0.53
SMARCD1-206ENST00000549274 AMOTL1Q8IY63 956 aa11.73□□□□□ -0.53
SMARCD1-206ENST00000549274 EDC3Q96F86 508 aaKnown RBP11.73□□□□□ -0.53
SMARCD1-206ENST00000549274 CRNKL1Q9BZJ0 848 aaKnown RBP11.73□□□□□ -0.53
SMARCD1-206ENST00000549274 ZNF532Q9HCE3 1301 aa11.73□□□□□ -0.53
SMARCD1-206ENST00000549274 MYOZ2Q9NPC6 264 aa11.73□□□□□ -0.53
SMARCD1-206ENST00000549274 KCNQ5Q9NR82 932 aa11.73□□□□□ -0.53
SMARCD1-206ENST00000549274 NDUFB9Q9Y6M9 179 aa11.73□□□□□ -0.53
SMARCD1-206ENST00000549274 GPR75-ASB3A0A0A6YYF3 556 aa11.72□□□□□ -0.53
SMARCD1-206ENST00000549274 MAGEB6P1A0A0J9YX57 407 aa11.72□□□□□ -0.53
SMARCD1-206ENST00000549274 TCRBV5S4A2TA0A5A2 114 aa11.72□□□□□ -0.53
SMARCD1-206ENST00000549274 F8W031 263 aaPredicted RBP11.72□□□□□ -0.53
SMARCD1-206ENST00000549274 DDNO94850 711 aaPredicted RBP11.72□□□□□ -0.53
SMARCD1-206ENST00000549274 REC8O95072 547 aa11.72□□□□□ -0.53
SMARCD1-206ENST00000549274 CHMLP26374 656 aa11.72□□□□□ -0.53
SMARCD1-206ENST00000549274 TNNI2P48788 182 aa11.72□□□□□ -0.53
SMARCD1-206ENST00000549274 CFAP100Q494V2 611 aa11.72□□□□□ -0.53
SMARCD1-206ENST00000549274 FKBP1CQ5VVH2 108 aa11.72□□□□□ -0.53
SMARCD1-206ENST00000549274 GIMAP6Q6P9H5 292 aa11.72□□□□□ -0.53
SMARCD1-206ENST00000549274 NACAP1Q9BZK3 213 aa11.72□□□□□ -0.53
SMARCD1-206ENST00000549274 ZBTB12Q9Y330 459 aaPredicted RBP11.72□□□□□ -0.53
SMARCD1-206ENST00000549274 DAGLAQ9Y4D2 1042 aa11.72□□□□□ -0.53
SMARCD1-206ENST00000549274 PITPNM2Q9BZ72 1349 aa11.71□□□□□ -0.53
SMARCD1-206ENST00000549274 SPDYE2BA6NHP3 402 aa11.71□□□□□ -0.53
SMARCD1-206ENST00000549274 TULP1O00294 542 aaPredicted RBP11.71□□□□□ -0.53
SMARCD1-206ENST00000549274 SPDYE6P0CI01 402 aa11.71□□□□□ -0.53
SMARCD1-206ENST00000549274 VEGFAP15692 232 aaPredicted RBP11.71□□□□□ -0.53
SMARCD1-206ENST00000549274 BTDP43251 543 aa11.71□□□□□ -0.53
SMARCD1-206ENST00000549274 SCNN1DP51172 638 aa11.71□□□□□ -0.53
SMARCD1-206ENST00000549274 KIF4BQ2VIQ3 1234 aa11.71□□□□□ -0.53
SMARCD1-206ENST00000549274 APOBEC3FQ8IUX4 373 aaKnown RBP11.71□□□□□ -0.53
SMARCD1-206ENST00000549274 ZC3H15Q8WU90 426 aaKnown RBP11.71□□□□□ -0.53
SMARCD1-206ENST00000549274 ATP8A2Q9NTI2 1148 aa11.71□□□□□ -0.53
SMARCD1-206ENST00000549274 FOCADQ5VW36 1801 aa11.7□□□□□ -0.54
SMARCD1-206ENST00000549274 CCDC171Q6TFL3 1326 aa11.7□□□□□ -0.54
SMARCD1-206ENST00000549274 GPAA1O43292 621 aa11.7□□□□□ -0.54
SMARCD1-206ENST00000549274 NMIQ13287 307 aaPredicted RBP11.7□□□□□ -0.54
SMARCD1-206ENST00000549274 DIXDC1Q155Q3 683 aa11.7□□□□□ -0.54
SMARCD1-206ENST00000549274 CWC27Q6UX04 472 aaKnown RBP11.7□□□□□ -0.54
SMARCD1-206ENST00000549274 HOOK2Q96ED9 719 aa11.7□□□□□ -0.54
SMARCD1-206ENST00000549274 MXD3Q9BW11 206 aa11.7□□□□□ -0.54
SMARCD1-206ENST00000549274 UPF2Q9HAU5 1272 aaKnown RBP11.7□□□□□ -0.54
SMARCD1-206ENST00000549274 PPP2R3BQ9Y5P8 575 aa11.7□□□□□ -0.54
SMARCD1-206ENST00000549274 ZMYM6O95789 1325 aa11.69□□□□□ -0.54
SMARCD1-206ENST00000549274 SGSM2O43147 1006 aa11.69□□□□□ -0.54
SMARCD1-206ENST00000549274 MBD4O95243 580 aa11.69□□□□□ -0.54
SMARCD1-206ENST00000549274 EPHX2P34913 555 aa11.69□□□□□ -0.54
SMARCD1-206ENST00000549274 USP5P45974 858 aa11.69□□□□□ -0.54
SMARCD1-206ENST00000549274 NT5C2P49902 561 aa11.69□□□□□ -0.54
SMARCD1-206ENST00000549274 TEX11Q8IYF3 940 aa11.69□□□□□ -0.54
SMARCD1-206ENST00000549274 OSBP2Q969R2 916 aa11.69□□□□□ -0.54
SMARCD1-206ENST00000549274 ESYT1Q9BSJ8 1104 aa11.69□□□□□ -0.54
SMARCD1-206ENST00000549274 DSCC1Q9BVC3 393 aa11.69□□□□□ -0.54
SMARCD1-206ENST00000549274 AATFQ9NY61 560 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMARCD1-206ENST00000549274 CTNNA3Q9UI47 895 aa11.69□□□□□ -0.54
SMARCD1-206ENST00000549274 COL2A1P02458 1487 aaPredicted RBP11.69□□□□□ -0.54
SMARCD1-206ENST00000549274 WNT10BO00744 389 aa11.68□□□□□ -0.54
SMARCD1-206ENST00000549274 ENTPD3O75355 529 aa11.68□□□□□ -0.54
SMARCD1-206ENST00000549274 MCCP23508 829 aa11.68□□□□□ -0.54
SMARCD1-206ENST00000549274 GRIK5Q16478 980 aa11.68□□□□□ -0.54
SMARCD1-206ENST00000549274 SPDYE2Q495Y8 402 aa11.68□□□□□ -0.54
SMARCD1-206ENST00000549274 APOBEC3HQ6NTF7 200 aaKnown RBP11.68□□□□□ -0.54
SMARCD1-206ENST00000549274 FAM83AQ86UY5 434 aa11.68□□□□□ -0.54
SMARCD1-206ENST00000549274 SKAP1Q86WV1 359 aa11.68□□□□□ -0.54
SMARCD1-206ENST00000549274 ZBED3Q96IU2 234 aaPredicted RBP11.68□□□□□ -0.54
SMARCD1-206ENST00000549274 STRBPQ96SI9 672 aaKnown RBP11.68□□□□□ -0.54
SMARCD1-206ENST00000549274 RIOK1Q9BRS2 568 aaKnown RBP11.68□□□□□ -0.54
SMARCD1-206ENST00000549274 IDI2Q9BXS1 227 aa11.68□□□□□ -0.54
SMARCD1-206ENST00000549274 USP40Q9NVE5 1235 aa11.68□□□□□ -0.54
SMARCD1-206ENST00000549274 NAV1Q8NEY1 1877 aa11.68□□□□□ -0.54
SMARCD1-206ENST00000549274 CDK5RAP2Q96SN8 1893 aa11.68□□□□□ -0.54
SMARCD1-206ENST00000549274 MYH1P12882 1939 aa11.67□□□□□ -0.54
SMARCD1-206ENST00000549274 A0A0D9SFI3 127 aa11.67□□□□□ -0.54
SMARCD1-206ENST00000549274 PATL2C9JE40 543 aaKnown RBP11.67□□□□□ -0.54
SMARCD1-206ENST00000549274 SLC3A2P08195 630 aaKnown RBP11.67□□□□□ -0.54
SMARCD1-206ENST00000549274 ALX1Q15699 326 aa11.67□□□□□ -0.54
SMARCD1-206ENST00000549274 TBC1D10BQ4KMP7 808 aaPredicted RBP11.67□□□□□ -0.54
SMARCD1-206ENST00000549274 RNF20Q5VTR2 975 aa11.67□□□□□ -0.54
SMARCD1-206ENST00000549274 MIGA1Q8NAN2 632 aa11.67□□□□□ -0.54
SMARCD1-206ENST00000549274 ZNF384Q8TF68 577 aa11.67□□□□□ -0.54
SMARCD1-206ENST00000549274 DCPSQ96C86 337 aaKnown RBP11.67□□□□□ -0.54
SMARCD1-206ENST00000549274 FAM227BQ96M60 508 aa11.67□□□□□ -0.54
SMARCD1-206ENST00000549274 PUS7LQ9H0K6 701 aaKnown RBP11.67□□□□□ -0.54
SMARCD1-206ENST00000549274 DHX36Q9H2U1 1008 aaKnown RBP11.67□□□□□ -0.54
SMARCD1-206ENST00000549274 TAF1DQ9H5J8 278 aaPredicted RBP11.67□□□□□ -0.54
SMARCD1-206ENST00000549274 ZNF287Q9HBT7 754 aa11.67□□□□□ -0.54
SMARCD1-206ENST00000549274 ARPP21Q9UBL0 812 aaPredicted RBP11.67□□□□□ -0.54
SMARCD1-206ENST00000549274 SLC4A4Q9Y6R1 1079 aa11.67□□□□□ -0.54
SMARCD1-206ENST00000549274 APPP05067 770 aa11.66□□□□□ -0.54
SMARCD1-206ENST00000549274 HLA-DOAP06340 250 aa11.66□□□□□ -0.54
SMARCD1-206ENST00000549274 PCP11498 1178 aaKnown RBP11.66□□□□□ -0.54
SMARCD1-206ENST00000549274 EPS15P42566 896 aa11.66□□□□□ -0.54
SMARCD1-206ENST00000549274 TDO2P48775 406 aa11.66□□□□□ -0.54
SMARCD1-206ENST00000549274 RHBDL3P58872 404 aa11.66□□□□□ -0.54
SMARCD1-206ENST00000549274 CDC42EP5Q6NZY7 148 aa11.66□□□□□ -0.54
SMARCD1-206ENST00000549274 TTC6Q86TZ1 520 aa11.66□□□□□ -0.54
SMARCD1-206ENST00000549274 LDHDQ86WU2 507 aa11.66□□□□□ -0.54
SMARCD1-206ENST00000549274 PRMT6Q96LA8 375 aaPredicted RBP11.66□□□□□ -0.54
SMARCD1-206ENST00000549274 NAPBQ9H115 298 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms