RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 SLU7O95391 586 aaKnown RBP16.27■□□□□ 0.2
CACNB3-209ENST00000548860 ZFYP08048 801 aaPredicted RBP16.27■□□□□ 0.2
CACNB3-209ENST00000548860 PDIA4P13667 645 aaKnown RBP16.27■□□□□ 0.2
CACNB3-209ENST00000548860 PDE6AP16499 860 aa16.27■□□□□ 0.2
CACNB3-209ENST00000548860 MCAMP43121 646 aa16.27■□□□□ 0.2
CACNB3-209ENST00000548860 USP5P45974 858 aa16.27■□□□□ 0.2
CACNB3-209ENST00000548860 BLZF1Q9H2G9 400 aa16.27■□□□□ 0.2
CACNB3-209ENST00000548860 BRMS1Q9HCU9 246 aa16.27■□□□□ 0.2
CACNB3-209ENST00000548860 PAXBP1Q9Y5B6 917 aa16.27■□□□□ 0.2
CACNB3-209ENST00000548860 TMEM94Q12767 1356 aa16.27■□□□□ 0.19
CACNB3-209ENST00000548860 PHACTR2O75167 634 aa16.27■□□□□ 0.19
CACNB3-209ENST00000548860 FOXO4P98177 505 aa16.27■□□□□ 0.19
CACNB3-209ENST00000548860 RCOR1Q9UKL0 485 aa16.27■□□□□ 0.19
CACNB3-209ENST00000548860 MCM7P33993 719 aa16.26■□□□□ 0.19
CACNB3-209ENST00000548860 FAM47AQ5JRC9 791 aa16.26■□□□□ 0.19
CACNB3-209ENST00000548860 TMCO3Q6UWJ1 677 aa16.26■□□□□ 0.19
CACNB3-209ENST00000548860 SERTAD1Q9UHV2 236 aa16.26■□□□□ 0.19
CACNB3-209ENST00000548860 GSDMDP57764 484 aa16.26■□□□□ 0.19
CACNB3-209ENST00000548860 ADALQ6DHV7 355 aa16.26■□□□□ 0.19
CACNB3-209ENST00000548860 TDRD7Q8NHU6 1098 aaKnown RBP16.26■□□□□ 0.19
CACNB3-209ENST00000548860 NFE2L3Q9Y4A8 694 aa16.26■□□□□ 0.19
CACNB3-209ENST00000548860 PCDHA5Q9Y5H7 936 aa16.26■□□□□ 0.19
CACNB3-209ENST00000548860 NRXN3Q9Y4C0 1643 aa16.26■□□□□ 0.19
CACNB3-209ENST00000548860 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.26■□□□□ 0.19
CACNB3-209ENST00000548860 ANKRD26Q9UPS8 1709 aa16.26■□□□□ 0.19
CACNB3-209ENST00000548860 MCM6Q14566 821 aa16.26■□□□□ 0.19
CACNB3-209ENST00000548860 LINC00301Q8NCQ3 95 aa16.26■□□□□ 0.19
CACNB3-209ENST00000548860 LLPHQ9BRT6 129 aaKnown RBP16.26■□□□□ 0.19
CACNB3-209ENST00000548860 KNDC1Q76NI1 1749 aa16.26■□□□□ 0.19
CACNB3-209ENST00000548860 CBFA2T2O43439 604 aa16.25■□□□□ 0.19
CACNB3-209ENST00000548860 CLSTN1O94985 981 aa16.25■□□□□ 0.19
CACNB3-209ENST00000548860 CASQ1P31415 396 aa16.25■□□□□ 0.19
CACNB3-209ENST00000548860 FILIP1LQ4L180 1135 aa16.25■□□□□ 0.19
CACNB3-209ENST00000548860 ZNF710Q8N1W2 664 aa16.25■□□□□ 0.19
CACNB3-209ENST00000548860 CEMIPQ8WUJ3 1361 aa16.25■□□□□ 0.19
CACNB3-209ENST00000548860 CYB5R4Q7L1T6 521 aa16.25■□□□□ 0.19
CACNB3-209ENST00000548860 TBC1D10CQ8IV04 446 aa16.25■□□□□ 0.19
CACNB3-209ENST00000548860 BAZ2BQ9UIF8 2168 aaKnown RBP16.25■□□□□ 0.19
CACNB3-209ENST00000548860 TSPY2A6NKD2 308 aa16.25■□□□□ 0.19
CACNB3-209ENST00000548860 TMEM232C9JQI7 657 aa16.25■□□□□ 0.19
CACNB3-209ENST00000548860 RFX5P48382 616 aaPredicted RBP16.25■□□□□ 0.19
CACNB3-209ENST00000548860 NUP88Q99567 741 aaPredicted RBP16.25■□□□□ 0.19
CACNB3-209ENST00000548860 VPS16Q9H269 839 aa16.25■□□□□ 0.19
CACNB3-209ENST00000548860 G3V3G9 751 aa16.24■□□□□ 0.19
CACNB3-209ENST00000548860 EPB41L2O43491 1005 aaKnown RBP16.24■□□□□ 0.19
CACNB3-209ENST00000548860 DCAF8Q5TAQ9 597 aa16.24■□□□□ 0.19
CACNB3-209ENST00000548860 ANKRD20A12PQ8NF67 263 aa16.24■□□□□ 0.19
CACNB3-209ENST00000548860 PCDH11XQ9BZA7 1347 aa16.24■□□□□ 0.19
CACNB3-209ENST00000548860 PCDH11YQ9BZA8 1340 aa16.24■□□□□ 0.19
CACNB3-209ENST00000548860 TNNT3P45378 269 aaPredicted RBP16.24■□□□□ 0.19
CACNB3-209ENST00000548860 MYL5Q02045 173 aa16.24■□□□□ 0.19
CACNB3-209ENST00000548860 DRC1Q96MC2 740 aa16.24■□□□□ 0.19
CACNB3-209ENST00000548860 H7C1W4 665 aa16.24■□□□□ 0.19
CACNB3-209ENST00000548860 CAGE1Q8TC20 777 aa16.24■□□□□ 0.19
CACNB3-209ENST00000548860 ST7Q9NRC1 585 aa16.24■□□□□ 0.19
CACNB3-209ENST00000548860 ELP1O95163 1332 aa16.24■□□□□ 0.19
CACNB3-209ENST00000548860 CDC27P30260 824 aa16.23■□□□□ 0.19
CACNB3-209ENST00000548860 ZNF274Q96GC6 653 aaPredicted RBP16.23■□□□□ 0.19
CACNB3-209ENST00000548860 ZSWIM5Q9P217 1185 aa16.23■□□□□ 0.19
CACNB3-209ENST00000548860 N4BP3O15049 544 aa16.23■□□□□ 0.19
CACNB3-209ENST00000548860 IFIT1BQ5T764 474 aaKnown RBP16.23■□□□□ 0.19
CACNB3-209ENST00000548860 TRMT1LQ7Z2T5 733 aaKnown RBP16.23■□□□□ 0.19
CACNB3-209ENST00000548860 PIGBQ92521 554 aa16.23■□□□□ 0.19
CACNB3-209ENST00000548860 GNL3LQ9NVN8 582 aaKnown RBP16.23■□□□□ 0.19
CACNB3-209ENST00000548860 FDPSP14324 419 aaKnown RBP16.23■□□□□ 0.19
CACNB3-209ENST00000548860 TTF1Q15361 905 aaPredicted RBP16.23■□□□□ 0.19
CACNB3-209ENST00000548860 RRAGBQ5VZM2 374 aa16.23■□□□□ 0.19
CACNB3-209ENST00000548860 IQCA1Q86XH1 822 aa16.23■□□□□ 0.19
CACNB3-209ENST00000548860 GDAP1L1Q96MZ0 367 aa16.23■□□□□ 0.19
CACNB3-209ENST00000548860 FUCA2Q9BTY2 467 aa16.23■□□□□ 0.19
CACNB3-209ENST00000548860 MKNK2Q9HBH9 465 aa16.23■□□□□ 0.19
CACNB3-209ENST00000548860 RHOXF2BP0C7M4 288 aa16.23■□□□□ 0.19
CACNB3-209ENST00000548860 NCBP1Q09161 790 aaKnown RBP16.23■□□□□ 0.19
CACNB3-209ENST00000548860 APOA5Q6Q788 366 aa16.23■□□□□ 0.19
CACNB3-209ENST00000548860 SPATA5Q8NB90 893 aa16.23■□□□□ 0.19
CACNB3-209ENST00000548860 CTCFLQ8NI51 663 aaPredicted RBP16.23■□□□□ 0.19
CACNB3-209ENST00000548860 RHOXF2Q9BQY4 288 aa16.23■□□□□ 0.19
CACNB3-209ENST00000548860 KRI1Q8N9T8 703 aaKnown RBP16.22■□□□□ 0.19
CACNB3-209ENST00000548860 DPF2Q92785 391 aa16.22■□□□□ 0.19
CACNB3-209ENST00000548860 ANKIB1Q9P2G1 1089 aa16.22■□□□□ 0.19
CACNB3-209ENST00000548860 WDHD1O75717 1129 aaPredicted RBP16.22■□□□□ 0.19
CACNB3-209ENST00000548860 IPO7O95373 1038 aaKnown RBP16.22■□□□□ 0.19
CACNB3-209ENST00000548860 GUCY1A2P33402 732 aa16.22■□□□□ 0.19
CACNB3-209ENST00000548860 CATIPQ7Z7H3 387 aa16.22■□□□□ 0.19
CACNB3-209ENST00000548860 IFNL3Q8IZI9 196 aa16.22■□□□□ 0.19
CACNB3-209ENST00000548860 NOC3LQ8WTT2 800 aaKnown RBP16.22■□□□□ 0.19
CACNB3-209ENST00000548860 CCDC102AQ96A19 550 aa16.22■□□□□ 0.19
CACNB3-209ENST00000548860 MATR3P43243 847 aaKnown RBP eCLIP16.22■□□□□ 0.19
CACNB3-209ENST00000548860 TERF1P54274 439 aa16.22■□□□□ 0.19
CACNB3-209ENST00000548860 KIF23Q02241 960 aaPredicted RBP16.22■□□□□ 0.19
CACNB3-209ENST00000548860 CAVIN4Q5BKX8 364 aa16.22■□□□□ 0.19
CACNB3-209ENST00000548860 F8W031 263 aaPredicted RBP16.21■□□□□ 0.19
CACNB3-209ENST00000548860 BRAPQ7Z569 592 aa16.21■□□□□ 0.19
CACNB3-209ENST00000548860 AATFQ9NY61 560 aaKnown RBP eCLIP16.21■□□□□ 0.19
CACNB3-209ENST00000548860 NEMFO60524 1076 aa16.21■□□□□ 0.19
CACNB3-209ENST00000548860 SEC31AO94979 1220 aaKnown RBP16.21■□□□□ 0.19
CACNB3-209ENST00000548860 NLRP12P59046 1061 aa16.21■□□□□ 0.19
CACNB3-209ENST00000548860 NOL10Q9BSC4 688 aaKnown RBP16.21■□□□□ 0.19
CACNB3-209ENST00000548860 AGLP35573 1532 aa16.21■□□□□ 0.19
CACNB3-209ENST00000548860 PEAK1Q9H792 1746 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms