RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 TCP10Q12799 353 aa19.36■□□□□ 0.69
DDX54-205ENST00000548786 SPTY2D1Q68D10 685 aaPredicted RBP19.36■□□□□ 0.69
DDX54-205ENST00000548786 CDC42EP5Q6NZY7 148 aa19.36■□□□□ 0.69
DDX54-205ENST00000548786 ERICH6Q7L0X2 663 aa19.36■□□□□ 0.69
DDX54-205ENST00000548786 RHPN1Q8TCX5 695 aa19.36■□□□□ 0.69
DDX54-205ENST00000548786 MRIQ9BWK5 157 aa19.36■□□□□ 0.69
DDX54-205ENST00000548786 USP40Q9NVE5 1235 aa19.36■□□□□ 0.69
DDX54-205ENST00000548786 RAI14Q9P0K7 980 aa19.36■□□□□ 0.69
DDX54-205ENST00000548786 PPP1R12BO60237 982 aaPredicted RBP19.35■□□□□ 0.69
DDX54-205ENST00000548786 HSP90AB4PQ58FF6 505 aa19.35■□□□□ 0.69
DDX54-205ENST00000548786 COL13A1Q5TAT6 717 aaPredicted RBP19.35■□□□□ 0.69
DDX54-205ENST00000548786 CLMNQ96JQ2 1002 aa19.35■□□□□ 0.69
DDX54-205ENST00000548786 TEPSINQ96N21 525 aa19.35■□□□□ 0.69
DDX54-205ENST00000548786 NDUFB9Q9Y6M9 179 aa19.35■□□□□ 0.69
DDX54-205ENST00000548786 LBX1P52954 281 aa19.34■□□□□ 0.69
DDX54-205ENST00000548786 NFIAQ12857 509 aa19.34■□□□□ 0.69
DDX54-205ENST00000548786 LRP2BPQ9P2M1 347 aa19.34■□□□□ 0.69
DDX54-205ENST00000548786 BTDP43251 543 aa19.33■□□□□ 0.68
DDX54-205ENST00000548786 ZAP70P43403 619 aa19.33■□□□□ 0.68
DDX54-205ENST00000548786 CTCFP49711 727 aaPredicted RBP19.33■□□□□ 0.68
DDX54-205ENST00000548786 ZNF384Q8TF68 577 aa19.33■□□□□ 0.68
DDX54-205ENST00000548786 MROH7-TTC4A0A0A0MT08 1334 aa19.32■□□□□ 0.68
DDX54-205ENST00000548786 AKAP11Q9UKA4 1901 aa19.32■□□□□ 0.68
DDX54-205ENST00000548786 ZBTB22O15209 634 aa19.32■□□□□ 0.68
DDX54-205ENST00000548786 USP2O75604 605 aaPredicted RBP19.32■□□□□ 0.68
DDX54-205ENST00000548786 HSPA8P11142 646 aaKnown RBP19.32■□□□□ 0.68
DDX54-205ENST00000548786 IREB2P48200 963 aaKnown RBP19.32■□□□□ 0.68
DDX54-205ENST00000548786 LDLRAD1Q5T700 205 aa19.32■□□□□ 0.68
DDX54-205ENST00000548786 KIF1BPQ96EK5 621 aa19.32■□□□□ 0.68
DDX54-205ENST00000548786 CRBNQ96SW2 442 aa19.32■□□□□ 0.68
DDX54-205ENST00000548786 OTOFQ9HC10 1997 aa19.32■□□□□ 0.68
DDX54-205ENST00000548786 GAKO14976 1311 aa19.31■□□□□ 0.68
DDX54-205ENST00000548786 CYP2E1P05181 493 aaPredicted RBP19.31■□□□□ 0.68
DDX54-205ENST00000548786 SLF2Q8IX21 1173 aa19.31■□□□□ 0.68
DDX54-205ENST00000548786 CLASRPQ8N2M8 674 aaKnown RBP19.31■□□□□ 0.68
DDX54-205ENST00000548786 NSUN4Q96CB9 384 aaKnown RBP19.31■□□□□ 0.68
DDX54-205ENST00000548786 PIH1D3Q9NQM4 214 aaKnown RBP19.31■□□□□ 0.68
DDX54-205ENST00000548786 FAM198AQ9UFP1 575 aa19.31■□□□□ 0.68
DDX54-205ENST00000548786 SMARCA5O60264 1052 aaPredicted RBP19.3■□□□□ 0.68
DDX54-205ENST00000548786 IFIT2P09913 472 aaKnown RBP19.3■□□□□ 0.68
DDX54-205ENST00000548786 PICALMQ13492 652 aa19.3■□□□□ 0.68
DDX54-205ENST00000548786 FAM83AQ86UY5 434 aa19.3■□□□□ 0.68
DDX54-205ENST00000548786 ZFPM1Q8IX07 1006 aa19.3■□□□□ 0.68
DDX54-205ENST00000548786 SLC10A4Q96EP9 437 aa19.3■□□□□ 0.68
DDX54-205ENST00000548786 CSRNP1Q96S65 589 aa19.3■□□□□ 0.68
DDX54-205ENST00000548786 MYO5AQ9Y4I1 1855 aaKnown RBP19.3■□□□□ 0.68
DDX54-205ENST00000548786 AK9Q5TCS8 1911 aa19.29■□□□□ 0.68
DDX54-205ENST00000548786 RAB11FIP3O75154 756 aa19.29■□□□□ 0.68
DDX54-205ENST00000548786 RGS3P49796 1198 aa19.29■□□□□ 0.68
DDX54-205ENST00000548786 GSTO1P78417 241 aa19.29■□□□□ 0.68
DDX54-205ENST00000548786 MAP3K11Q16584 847 aa19.29■□□□□ 0.68
DDX54-205ENST00000548786 FKBP1CQ5VVH2 108 aa19.29■□□□□ 0.68
DDX54-205ENST00000548786 MIGA2Q7L4E1 593 aa19.29■□□□□ 0.68
DDX54-205ENST00000548786 ELP3Q9H9T3 547 aa19.29■□□□□ 0.68
DDX54-205ENST00000548786 IDH1O75874 414 aaKnown RBP19.28■□□□□ 0.68
DDX54-205ENST00000548786 NAA16Q6N069 864 aaPredicted RBP19.28■□□□□ 0.68
DDX54-205ENST00000548786 FAM151AQ8WW52 585 aa19.28■□□□□ 0.68
DDX54-205ENST00000548786 ZNF512BQ96KM6 892 aaPredicted RBP19.28■□□□□ 0.68
DDX54-205ENST00000548786 MAST2Q6P0Q8 1798 aa19.28■□□□□ 0.68
DDX54-205ENST00000548786 TRPA1O75762 1119 aa19.27■□□□□ 0.68
DDX54-205ENST00000548786 SPRYD7Q5W111 196 aa19.27■□□□□ 0.68
DDX54-205ENST00000548786 ANKRD13AQ8IZ07 590 aa19.27■□□□□ 0.68
DDX54-205ENST00000548786 CNKSR2Q8WXI2 1034 aa19.27■□□□□ 0.68
DDX54-205ENST00000548786 FAM163AQ96GL9 167 aaPredicted RBP19.27■□□□□ 0.68
DDX54-205ENST00000548786 ANTXR1Q9H6X2 564 aa19.27■□□□□ 0.68
DDX54-205ENST00000548786 DDX4Q9NQI0 724 aaKnown RBP19.27■□□□□ 0.68
DDX54-205ENST00000548786 PCDHB15Q9Y5E8 787 aa19.27■□□□□ 0.68
DDX54-205ENST00000548786 GPR75-ASB3A0A0A6YYF3 556 aa19.26■□□□□ 0.67
DDX54-205ENST00000548786 WDHD1O75717 1129 aaPredicted RBP19.26■□□□□ 0.67
DDX54-205ENST00000548786 LDHCP07864 332 aa19.26■□□□□ 0.67
DDX54-205ENST00000548786 VGLL4Q14135 290 aa19.26■□□□□ 0.67
DDX54-205ENST00000548786 ADGRA1Q86SQ6 560 aa19.26■□□□□ 0.67
DDX54-205ENST00000548786 ZSCAN29Q8IWY8 852 aaPredicted RBP19.26■□□□□ 0.67
DDX54-205ENST00000548786 WNK4Q96J92 1243 aa19.26■□□□□ 0.67
DDX54-205ENST00000548786 WRNIP1Q96S55 665 aa19.26■□□□□ 0.67
DDX54-205ENST00000548786 DNAJC2Q99543 621 aaKnown RBP19.26■□□□□ 0.67
DDX54-205ENST00000548786 NOL10Q9BSC4 688 aaKnown RBP19.26■□□□□ 0.67
DDX54-205ENST00000548786 LRRCC1Q9C099 1032 aa19.26■□□□□ 0.67
DDX54-205ENST00000548786 RNF186Q9NXI6 227 aa19.26■□□□□ 0.67
DDX54-205ENST00000548786 AATFQ9NY61 560 aaKnown RBP eCLIP19.26■□□□□ 0.67
DDX54-205ENST00000548786 RPAP1Q9BWH6 1393 aaPredicted RBP19.26■□□□□ 0.67
DDX54-205ENST00000548786 RFX7Q2KHR2 1363 aa19.25■□□□□ 0.67
DDX54-205ENST00000548786 GJA5P36382 358 aa19.25■□□□□ 0.67
DDX54-205ENST00000548786 RHBDL3P58872 404 aa19.25■□□□□ 0.67
DDX54-205ENST00000548786 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.25■□□□□ 0.67
DDX54-205ENST00000548786 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.25■□□□□ 0.67
DDX54-205ENST00000548786 SH3RF3Q8TEJ3 882 aaPredicted RBP19.25■□□□□ 0.67
DDX54-205ENST00000548786 ZKSCAN4Q969J2 545 aaPredicted RBP19.25■□□□□ 0.67
DDX54-205ENST00000548786 CA12O43570 354 aa19.24■□□□□ 0.67
DDX54-205ENST00000548786 SLURP2P0DP57 97 aa19.24■□□□□ 0.67
DDX54-205ENST00000548786 MAP3K9P80192 1104 aa19.24■□□□□ 0.67
DDX54-205ENST00000548786 DCAF15Q66K64 600 aa19.24■□□□□ 0.67
DDX54-205ENST00000548786 SH3BP5LQ7L8J4 393 aa19.24■□□□□ 0.67
DDX54-205ENST00000548786 TEX11Q8IYF3 940 aa19.24■□□□□ 0.67
DDX54-205ENST00000548786 TNS4Q8IZW8 715 aa19.24■□□□□ 0.67
DDX54-205ENST00000548786 OPTNQ96CV9 577 aa19.24■□□□□ 0.67
DDX54-205ENST00000548786 IDI2Q9BXS1 227 aa19.24■□□□□ 0.67
DDX54-205ENST00000548786 CSADQ9Y600 493 aa19.24■□□□□ 0.67
DDX54-205ENST00000548786 DOCK2Q92608 1830 aa19.23■□□□□ 0.67
DDX54-205ENST00000548786 GOLIM4O00461 696 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms