RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 ZBTB3Q9H5J0 574 aa11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 ATRNO75882 1429 aa11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 PAPPAQ13219 1627 aa11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 ZSCAN12O43309 604 aa11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 CUTAO60888 179 aa11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 A1BGP04217 495 aa11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 METAP2P50579 478 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 CLCN6P51797 869 aa11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 SCARF1Q14162 830 aa11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 KRT40Q6A162 431 aa11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 OLFM4Q6UX06 510 aa11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 PROSER2Q86WR7 435 aaPredicted RBP11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 PLA2G12BQ9BX93 195 aa11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 ARGLU1Q9NWB6 273 aaPredicted RBP11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 DNAI1Q9UI46 699 aa11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 MAP3K15Q6ZN16 1313 aa11.38□□□□□ -0.59
SMARCD1-205ENST00000548573 SH2B2O14492 632 aaPredicted RBP11.38□□□□□ -0.59
SMARCD1-205ENST00000548573 TPM1P09493 284 aa11.38□□□□□ -0.59
SMARCD1-205ENST00000548573 TOP1P11387 765 aaKnown RBP11.38□□□□□ -0.59
SMARCD1-205ENST00000548573 TRIM28Q13263 835 aaKnown RBP11.38□□□□□ -0.59
SMARCD1-205ENST00000548573 CFAP100Q494V2 611 aa11.38□□□□□ -0.59
SMARCD1-205ENST00000548573 ARHGAP29Q52LW3 1261 aa11.38□□□□□ -0.59
SMARCD1-205ENST00000548573 CCDC102BQ68D86 513 aa11.38□□□□□ -0.59
SMARCD1-205ENST00000548573 RAB11FIP4Q86YS3 637 aa11.38□□□□□ -0.59
SMARCD1-205ENST00000548573 REXO1L1PQ8IX06 675 aa11.38□□□□□ -0.59
SMARCD1-205ENST00000548573 UBXN4Q92575 508 aa11.38□□□□□ -0.59
SMARCD1-205ENST00000548573 DPF2Q92785 391 aa11.38□□□□□ -0.59
SMARCD1-205ENST00000548573 TMEM87BQ96K49 555 aa11.38□□□□□ -0.59
SMARCD1-205ENST00000548573 ZNF512BQ96KM6 892 aaPredicted RBP11.38□□□□□ -0.59
SMARCD1-205ENST00000548573 FHOD1Q9Y613 1164 aa11.38□□□□□ -0.59
SMARCD1-205ENST00000548573 PCDH11XQ9BZA7 1347 aa11.38□□□□□ -0.59
SMARCD1-205ENST00000548573 PCDH11YQ9BZA8 1340 aa11.38□□□□□ -0.59
SMARCD1-205ENST00000548573 CCDC66A2RUB6 948 aa11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 GOLGA6L9A6NEM1 432 aa11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 EFCAB8A8MWE9 144 aa11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 NPHP1O15259 732 aa11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 ARHGAP6O43182 974 aa11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 ADD2P35612 726 aa11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 TCIRG1Q13488 830 aa11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 PNOCQ13519 176 aa11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 ISM2Q6H9L7 571 aa11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 KRBA2Q6ZNG9 492 aa11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 LRRN4CLQ8ND94 238 aa11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 NBPF3Q9H094 633 aa11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 ATP8B1O43520 1251 aa11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 ZRANB2O95218 330 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 CSF1RP07333 972 aa11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 GNL2Q13823 731 aaKnown RBP11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 APOA5Q6Q788 366 aa11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 METTL16Q86W50 562 aaKnown RBP11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 SYTL4Q96C24 671 aaPredicted RBP11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 AIFM3Q96NN9 605 aa11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 UTP14AQ9BVJ6 771 aaKnown RBP11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 HOOK1Q9UJC3 728 aaKnown RBP11.37□□□□□ -0.59
SMARCD1-205ENST00000548573 STK36Q9NRP7 1315 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 PCCAP05165 728 aaPredicted RBP11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 TRIM29Q14134 588 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 TTF1Q15361 905 aaPredicted RBP11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 UBE3CQ15386 1083 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 CHRNA2Q15822 529 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 NTRK3Q16288 839 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 TAF7LQ5H9L4 462 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 CYB5R4Q7L1T6 521 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 SGMS1Q86VZ5 419 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 TBC1D10CQ8IV04 446 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 TMEM139Q8IV31 216 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 CNNM3Q8NE01 707 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 MNS1Q8NEH6 495 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 MPHOSPH8Q99549 860 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 FANCLQ9NW38 375 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 KCNH3Q9ULD8 1083 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 TNS2Q63HR2 1409 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 ZBTB43O43298 467 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 TADA3O75528 432 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 PNMA6AP0CW24 399 aaPredicted RBP11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 CDC27P30260 824 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 IARSP41252 1262 aaKnown RBP11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 TBX2Q13207 712 aaPredicted RBP11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 IFIT5Q13325 482 aaKnown RBP11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 NKX1-1Q15270 411 aaPredicted RBP11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 LONRF3Q496Y0 759 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 HSP90AB3PQ58FF7 597 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 TMCO3Q6UWJ1 677 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 NOL10Q9BSC4 688 aaKnown RBP11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 PCDHA5Q9Y5H7 936 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 PARP3Q9Y6F1 533 aa11.36□□□□□ -0.59
SMARCD1-205ENST00000548573 ECM29Q5VYK3 1845 aa11.35□□□□□ -0.59
SMARCD1-205ENST00000548573 RIC1Q4ADV7 1423 aa11.35□□□□□ -0.59
SMARCD1-205ENST00000548573 TNS3Q68CZ2 1445 aa11.35□□□□□ -0.59
SMARCD1-205ENST00000548573 VWA3AA6NCI4 1184 aa11.35□□□□□ -0.59
SMARCD1-205ENST00000548573 STX10O60499 249 aa11.35□□□□□ -0.59
SMARCD1-205ENST00000548573 URI1O94763 535 aaPredicted RBP11.35□□□□□ -0.59
SMARCD1-205ENST00000548573 MCAMP43121 646 aa11.35□□□□□ -0.59
SMARCD1-205ENST00000548573 MDM2Q00987 491 aaPredicted RBP11.35□□□□□ -0.59
SMARCD1-205ENST00000548573 FOXP4Q8IVH2 680 aaPredicted RBP11.35□□□□□ -0.59
SMARCD1-205ENST00000548573 KRI1Q8N9T8 703 aaKnown RBP11.35□□□□□ -0.59
SMARCD1-205ENST00000548573 ZCRB1Q8TBF4 217 aaKnown RBP11.35□□□□□ -0.59
SMARCD1-205ENST00000548573 IGDCC4Q8TDY8 1250 aa11.35□□□□□ -0.59
SMARCD1-205ENST00000548573 CLIC6Q96NY7 704 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms