RNA–Protein interactions for RNA: ENST00000548399.1

PRPF40B-207, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-207ENST00000548399 PAPPA2Q9BXP8 1791 aa16.86■□□□□ 0.29
PRPF40B-207ENST00000548399 BTDP43251 543 aa16.85■□□□□ 0.29
PRPF40B-207ENST00000548399 HDAC1Q13547 482 aaPredicted RBP16.85■□□□□ 0.29
PRPF40B-207ENST00000548399 PRKG1Q13976 671 aa16.85■□□□□ 0.29
PRPF40B-207ENST00000548399 NBPF12Q5TAG4 269 aaPredicted RBP16.85■□□□□ 0.29
PRPF40B-207ENST00000548399 RGMBQ6NW40 437 aa16.85■□□□□ 0.29
PRPF40B-207ENST00000548399 MOB2Q70IA6 237 aa16.85■□□□□ 0.29
PRPF40B-207ENST00000548399 ARMC9Q7Z3E5 817 aa16.85■□□□□ 0.29
PRPF40B-207ENST00000548399 ZNF384Q8TF68 577 aa16.85■□□□□ 0.29
PRPF40B-207ENST00000548399 TMEM39BQ9GZU3 492 aa16.85■□□□□ 0.29
PRPF40B-207ENST00000548399 PIH1D3Q9NQM4 214 aaKnown RBP16.85■□□□□ 0.29
PRPF40B-207ENST00000548399 POLR2AP24928 1970 aaKnown RBP16.85■□□□□ 0.29
PRPF40B-207ENST00000548399 GPR75-ASB3A0A0A6YYF3 556 aa16.84■□□□□ 0.29
PRPF40B-207ENST00000548399 UBE2Q2LH0YL09 131 aa16.84■□□□□ 0.29
PRPF40B-207ENST00000548399 PPP1R12BO60237 982 aaPredicted RBP16.84■□□□□ 0.29
PRPF40B-207ENST00000548399 ZNF157P51786 506 aaPredicted RBP16.84■□□□□ 0.29
PRPF40B-207ENST00000548399 NAA16Q6N069 864 aaPredicted RBP16.84■□□□□ 0.29
PRPF40B-207ENST00000548399 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.84■□□□□ 0.29
PRPF40B-207ENST00000548399 TEPSINQ96N21 525 aa16.84■□□□□ 0.29
PRPF40B-207ENST00000548399 NOL10Q9BSC4 688 aaKnown RBP16.84■□□□□ 0.29
PRPF40B-207ENST00000548399 NDUFB9Q9Y6M9 179 aa16.84■□□□□ 0.29
PRPF40B-207ENST00000548399 SSC5DA1L4H1 1573 aa16.84■□□□□ 0.29
PRPF40B-207ENST00000548399 IDH1O75874 414 aaKnown RBP16.83■□□□□ 0.28
PRPF40B-207ENST00000548399 ATP5JP18859 108 aa16.83■□□□□ 0.28
PRPF40B-207ENST00000548399 TTF1Q15361 905 aaPredicted RBP16.83■□□□□ 0.28
PRPF40B-207ENST00000548399 CCDC102AQ96A19 550 aa16.83■□□□□ 0.28
PRPF40B-207ENST00000548399 GPATCH3Q96I76 525 aa16.83■□□□□ 0.28
PRPF40B-207ENST00000548399 ANGEL1Q9UNK9 670 aaKnown RBP16.83■□□□□ 0.28
PRPF40B-207ENST00000548399 RPAP1Q9BWH6 1393 aaPredicted RBP16.82■□□□□ 0.28
PRPF40B-207ENST00000548399 MAP3K12Q12852 859 aa16.82■□□□□ 0.28
PRPF40B-207ENST00000548399 NFIAQ12857 509 aa16.82■□□□□ 0.28
PRPF40B-207ENST00000548399 CDAN1Q8IWY9 1227 aa16.82■□□□□ 0.28
PRPF40B-207ENST00000548399 FAM151AQ8WW52 585 aa16.82■□□□□ 0.28
PRPF40B-207ENST00000548399 GCC1Q96CN9 775 aa16.82■□□□□ 0.28
PRPF40B-207ENST00000548399 HOOK2Q96ED9 719 aa16.82■□□□□ 0.28
PRPF40B-207ENST00000548399 DNAJC2Q99543 621 aaKnown RBP16.82■□□□□ 0.28
PRPF40B-207ENST00000548399 ANTXR1Q9H6X2 564 aa16.82■□□□□ 0.28
PRPF40B-207ENST00000548399 ECHDC1Q9NTX5 307 aa16.82■□□□□ 0.28
PRPF40B-207ENST00000548399 ZBTB47Q9UFB7 747 aaPredicted RBP16.82■□□□□ 0.28
PRPF40B-207ENST00000548399 BAG3O95817 575 aa16.81■□□□□ 0.28
PRPF40B-207ENST00000548399 MAP4K4O95819 1239 aaPredicted RBP16.81■□□□□ 0.28
PRPF40B-207ENST00000548399 MAP2K2P36507 400 aa16.81■□□□□ 0.28
PRPF40B-207ENST00000548399 TCP10Q12799 353 aa16.81■□□□□ 0.28
PRPF40B-207ENST00000548399 NOGQ13253 232 aa16.81■□□□□ 0.28
PRPF40B-207ENST00000548399 IDI2Q9BXS1 227 aa16.81■□□□□ 0.28
PRPF40B-207ENST00000548399 RWDD1Q9H446 243 aaPredicted RBP16.81■□□□□ 0.28
PRPF40B-207ENST00000548399 FAM198AQ9UFP1 575 aa16.81■□□□□ 0.28
PRPF40B-207ENST00000548399 FZD1Q9UP38 647 aa16.81■□□□□ 0.28
PRPF40B-207ENST00000548399 AKAP11Q9UKA4 1901 aa16.8■□□□□ 0.28
PRPF40B-207ENST00000548399 RFX7Q2KHR2 1363 aa16.8■□□□□ 0.28
PRPF40B-207ENST00000548399 MAST2Q6P0Q8 1798 aa16.8■□□□□ 0.28
PRPF40B-207ENST00000548399 GOLIM4O00461 696 aa16.8■□□□□ 0.28
PRPF40B-207ENST00000548399 AOC2O75106 756 aa16.8■□□□□ 0.28
PRPF40B-207ENST00000548399 ENTPD3O75355 529 aa16.8■□□□□ 0.28
PRPF40B-207ENST00000548399 NEFLP07196 543 aa16.8■□□□□ 0.28
PRPF40B-207ENST00000548399 SLC10A3P09131 477 aa16.8■□□□□ 0.28
PRPF40B-207ENST00000548399 IREB2P48200 963 aaKnown RBP16.8■□□□□ 0.28
PRPF40B-207ENST00000548399 RGS3P49796 1198 aa16.8■□□□□ 0.28
PRPF40B-207ENST00000548399 IRX6P78412 446 aaPredicted RBP16.8■□□□□ 0.28
PRPF40B-207ENST00000548399 MAP3K11Q16584 847 aa16.8■□□□□ 0.28
PRPF40B-207ENST00000548399 LDLRAD1Q5T700 205 aa16.8■□□□□ 0.28
PRPF40B-207ENST00000548399 TMED8Q6PL24 325 aaPredicted RBP16.8■□□□□ 0.28
PRPF40B-207ENST00000548399 BOLA2Q9H3K6 86 aa16.8■□□□□ 0.28
PRPF40B-207ENST00000548399 UNCXA6NJT0 531 aa16.79■□□□□ 0.28
PRPF40B-207ENST00000548399 FAM155AB1AL88 458 aaPredicted RBP16.79■□□□□ 0.28
PRPF40B-207ENST00000548399 WDHD1O75717 1129 aaPredicted RBP16.79■□□□□ 0.28
PRPF40B-207ENST00000548399 PLCG2P16885 1265 aa16.79■□□□□ 0.28
PRPF40B-207ENST00000548399 CYP7A1P22680 504 aa16.79■□□□□ 0.28
PRPF40B-207ENST00000548399 RHBDL3P58872 404 aa16.79■□□□□ 0.28
PRPF40B-207ENST00000548399 PICALMQ13492 652 aa16.79■□□□□ 0.28
PRPF40B-207ENST00000548399 RASAL3Q86YV0 1011 aa16.79■□□□□ 0.28
PRPF40B-207ENST00000548399 MAGEB6Q8N7X4 407 aa16.79■□□□□ 0.28
PRPF40B-207ENST00000548399 HAUS7Q99871 368 aa16.79■□□□□ 0.28
PRPF40B-207ENST00000548399 PAG1Q9NWQ8 432 aa16.79■□□□□ 0.28
PRPF40B-207ENST00000548399 THSD7BQ9C0I4 1608 aa16.78■□□□□ 0.28
PRPF40B-207ENST00000548399 USP2O75604 605 aaPredicted RBP16.78■□□□□ 0.28
PRPF40B-207ENST00000548399 MAP2K1Q02750 393 aaPredicted RBP16.78■□□□□ 0.28
PRPF40B-207ENST00000548399 ANKRD45Q5TZF3 282 aa16.78■□□□□ 0.28
PRPF40B-207ENST00000548399 DCAF15Q66K64 600 aa16.78■□□□□ 0.28
PRPF40B-207ENST00000548399 ADGRA1Q86SQ6 560 aa16.78■□□□□ 0.28
PRPF40B-207ENST00000548399 TEX11Q8IYF3 940 aa16.78■□□□□ 0.28
PRPF40B-207ENST00000548399 AATFQ9NY61 560 aaKnown RBP eCLIP16.78■□□□□ 0.28
PRPF40B-207ENST00000548399 MYH2Q9UKX2 1941 aa16.78■□□□□ 0.28
PRPF40B-207ENST00000548399 NPM3O75607 178 aaKnown RBP16.77■□□□□ 0.28
PRPF40B-207ENST00000548399 HSPA1AP0DMV8 641 aaKnown RBP16.77■□□□□ 0.28
PRPF40B-207ENST00000548399 HSPA1BP0DMV9 641 aaKnown RBP16.77■□□□□ 0.28
PRPF40B-207ENST00000548399 PPP4CP60510 307 aa16.77■□□□□ 0.28
PRPF40B-207ENST00000548399 SLC9C2Q5TAH2 1124 aa16.77■□□□□ 0.28
PRPF40B-207ENST00000548399 CERS3Q8IU89 383 aa16.77■□□□□ 0.28
PRPF40B-207ENST00000548399 ZSCAN29Q8IWY8 852 aaPredicted RBP16.77■□□□□ 0.28
PRPF40B-207ENST00000548399 ZFPM1Q8IX07 1006 aa16.77■□□□□ 0.28
PRPF40B-207ENST00000548399 ANKRD13AQ8IZ07 590 aa16.77■□□□□ 0.28
PRPF40B-207ENST00000548399 SH3RF3Q8TEJ3 882 aaPredicted RBP16.77■□□□□ 0.28
PRPF40B-207ENST00000548399 AIDAQ96BJ3 306 aa16.77■□□□□ 0.28
PRPF40B-207ENST00000548399 SLC10A4Q96EP9 437 aa16.77■□□□□ 0.28
PRPF40B-207ENST00000548399 EDC3Q96F86 508 aaKnown RBP16.77■□□□□ 0.28
PRPF40B-207ENST00000548399 TTC41PQ6P2S7 1318 aa16.76■□□□□ 0.27
PRPF40B-207ENST00000548399 PDE6AP16499 860 aa16.76■□□□□ 0.27
PRPF40B-207ENST00000548399 CLMNQ96JQ2 1002 aa16.76■□□□□ 0.27
PRPF40B-207ENST00000548399 CSRNP1Q96S65 589 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms