RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 PPIL2Q13356 520 aa14.31□□□□□ -0.12
RAB5C-203ENST00000546881 KIF22Q14807 665 aa14.31□□□□□ -0.12
RAB5C-203ENST00000546881 DIXDC1Q155Q3 683 aa14.31□□□□□ -0.12
RAB5C-203ENST00000546881 ATP2B3Q16720 1220 aa14.31□□□□□ -0.12
RAB5C-203ENST00000546881 ALDH1L2Q3SY69 923 aa14.31□□□□□ -0.12
RAB5C-203ENST00000546881 FKBP1CQ5VVH2 108 aa14.31□□□□□ -0.12
RAB5C-203ENST00000546881 CDCA7LQ96GN5 454 aa14.31□□□□□ -0.12
RAB5C-203ENST00000546881 LDHBP07195 334 aaKnown RBP14.3□□□□□ -0.12
RAB5C-203ENST00000546881 PRDX5P30044 214 aa14.3□□□□□ -0.12
RAB5C-203ENST00000546881 INPP5BP32019 993 aa14.3□□□□□ -0.12
RAB5C-203ENST00000546881 SLC4A8Q2Y0W8 1093 aa14.3□□□□□ -0.12
RAB5C-203ENST00000546881 ATG9AQ7Z3C6 839 aa14.3□□□□□ -0.12
RAB5C-203ENST00000546881 NBPF11Q86T75 865 aa14.3□□□□□ -0.12
RAB5C-203ENST00000546881 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.3□□□□□ -0.12
RAB5C-203ENST00000546881 FAM151AQ8WW52 585 aa14.3□□□□□ -0.12
RAB5C-203ENST00000546881 ARHGAP39Q9C0H5 1083 aa14.3□□□□□ -0.12
RAB5C-203ENST00000546881 GNL3LQ9NVN8 582 aaKnown RBP14.3□□□□□ -0.12
RAB5C-203ENST00000546881 CEP126Q9P2H0 1117 aa14.3□□□□□ -0.12
RAB5C-203ENST00000546881 DAGLAQ9Y4D2 1042 aa14.3□□□□□ -0.12
RAB5C-203ENST00000546881 RPAP1Q9BWH6 1393 aaPredicted RBP14.3□□□□□ -0.12
RAB5C-203ENST00000546881 TLR2O60603 784 aa14.29□□□□□ -0.12
RAB5C-203ENST00000546881 CDC42EP5Q6NZY7 148 aa14.29□□□□□ -0.12
RAB5C-203ENST00000546881 ZNF333Q96JL9 665 aa14.29□□□□□ -0.12
RAB5C-203ENST00000546881 USP40Q9NVE5 1235 aa14.29□□□□□ -0.12
RAB5C-203ENST00000546881 PCDH10Q9P2E7 1040 aa14.29□□□□□ -0.12
RAB5C-203ENST00000546881 NOB1Q9ULX3 412 aaKnown RBP14.29□□□□□ -0.12
RAB5C-203ENST00000546881 ZSWIM8A7E2V4 1837 aa14.28□□□□□ -0.12
RAB5C-203ENST00000546881 LACTBP83111 547 aaPredicted RBP14.28□□□□□ -0.12
RAB5C-203ENST00000546881 PPATQ06203 517 aa14.28□□□□□ -0.12
RAB5C-203ENST00000546881 NFIAQ12857 509 aa14.28□□□□□ -0.12
RAB5C-203ENST00000546881 RBBP6Q7Z6E9 1792 aaKnown RBP14.28□□□□□ -0.12
RAB5C-203ENST00000546881 SH3TC2Q8TF17 1288 aa14.28□□□□□ -0.12
RAB5C-203ENST00000546881 GCC1Q96CN9 775 aa14.28□□□□□ -0.12
RAB5C-203ENST00000546881 CPA4Q9UI42 421 aa14.28□□□□□ -0.12
RAB5C-203ENST00000546881 PA2G4Q9UQ80 394 aaKnown RBP14.28□□□□□ -0.12
RAB5C-203ENST00000546881 LRRFIP2Q9Y608 721 aaKnown RBP14.28□□□□□ -0.12
RAB5C-203ENST00000546881 AK9Q5TCS8 1911 aa14.27□□□□□ -0.12
RAB5C-203ENST00000546881 CIAO1O76071 339 aa14.27□□□□□ -0.13
RAB5C-203ENST00000546881 PHKA1P46020 1223 aa14.27□□□□□ -0.13
RAB5C-203ENST00000546881 ZCCHC17Q9NP64 241 aaKnown RBP14.27□□□□□ -0.13
RAB5C-203ENST00000546881 DENND2AQ9ULE3 1009 aa14.27□□□□□ -0.13
RAB5C-203ENST00000546881 CCER2I3L3R5 266 aa14.26□□□□□ -0.13
RAB5C-203ENST00000546881 PDHXO00330 501 aa14.26□□□□□ -0.13
RAB5C-203ENST00000546881 IL15P40933 162 aaPredicted RBP14.26□□□□□ -0.13
RAB5C-203ENST00000546881 API5Q9BZZ5 524 aaKnown RBP14.26□□□□□ -0.13
RAB5C-203ENST00000546881 FAM198AQ9UFP1 575 aa14.26□□□□□ -0.13
RAB5C-203ENST00000546881 FBXO3Q9UK99 471 aa14.26□□□□□ -0.13
RAB5C-203ENST00000546881 HTTP42858 3142 aa14.26□□□□□ -0.13
RAB5C-203ENST00000546881 ADORA1P30542 326 aa14.25□□□□□ -0.13
RAB5C-203ENST00000546881 ANKRD23Q86SG2 305 aa14.25□□□□□ -0.13
RAB5C-203ENST00000546881 DZIP1Q86YF9 867 aaKnown RBP14.25□□□□□ -0.13
RAB5C-203ENST00000546881 ZSCAN29Q8IWY8 852 aaPredicted RBP14.25□□□□□ -0.13
RAB5C-203ENST00000546881 ZFPM1Q8IX07 1006 aa14.25□□□□□ -0.13
RAB5C-203ENST00000546881 MIER1Q8N108 512 aa14.25□□□□□ -0.13
RAB5C-203ENST00000546881 ABCF2Q9UG63 623 aa14.25□□□□□ -0.13
RAB5C-203ENST00000546881 HDAC5Q9UQL6 1122 aa14.25□□□□□ -0.13
RAB5C-203ENST00000546881 SALL1Q9NSC2 1324 aa14.24□□□□□ -0.13
RAB5C-203ENST00000546881 SEMA3EO15041 775 aa14.24□□□□□ -0.13
RAB5C-203ENST00000546881 FMNL1O95466 1100 aaPredicted RBP14.24□□□□□ -0.13
RAB5C-203ENST00000546881 PSMC4P43686 418 aa14.24□□□□□ -0.13
RAB5C-203ENST00000546881 RGS3P49796 1198 aa14.24□□□□□ -0.13
RAB5C-203ENST00000546881 HABP4Q5JVS0 413 aaKnown RBP14.24□□□□□ -0.13
RAB5C-203ENST00000546881 CCDC102BQ68D86 513 aa14.24□□□□□ -0.13
RAB5C-203ENST00000546881 C17orf99Q6UX52 265 aa14.24□□□□□ -0.13
RAB5C-203ENST00000546881 ZGPATQ8N5A5 531 aaKnown RBP14.24□□□□□ -0.13
RAB5C-203ENST00000546881 MEIS3Q99687 375 aa14.24□□□□□ -0.13
RAB5C-203ENST00000546881 ZNF112Q9UJU3 913 aa14.24□□□□□ -0.13
RAB5C-203ENST00000546881 GNRH1P01148 92 aa14.23□□□□□ -0.13
RAB5C-203ENST00000546881 TIMM10P62072 90 aa14.23□□□□□ -0.13
RAB5C-203ENST00000546881 PICALMQ13492 652 aa14.23□□□□□ -0.13
RAB5C-203ENST00000546881 NOL9Q5SY16 702 aaKnown RBP14.23□□□□□ -0.13
RAB5C-203ENST00000546881 RAET1EQ8TD07 263 aa14.23□□□□□ -0.13
RAB5C-203ENST00000546881 TRIM47Q96LD4 638 aa14.23□□□□□ -0.13
RAB5C-203ENST00000546881 PICK1Q9NRD5 415 aa14.23□□□□□ -0.13
RAB5C-203ENST00000546881 KCNH4Q9UQ05 1017 aa14.23□□□□□ -0.13
RAB5C-203ENST00000546881 KIAA0100Q14667 2235 aaKnown RBP14.23□□□□□ -0.13
RAB5C-203ENST00000546881 CT47B1P0C2W7 299 aaPredicted RBP14.22□□□□□ -0.13
RAB5C-203ENST00000546881 OSBPP22059 807 aa14.22□□□□□ -0.13
RAB5C-203ENST00000546881 CTGFP29279 349 aa14.22□□□□□ -0.13
RAB5C-203ENST00000546881 PRMT2P55345 433 aa14.22□□□□□ -0.13
RAB5C-203ENST00000546881 RASGRF1Q13972 1273 aa14.22□□□□□ -0.13
RAB5C-203ENST00000546881 GADL1Q6ZQY3 521 aa14.22□□□□□ -0.13
RAB5C-203ENST00000546881 TRMT2AQ8IZ69 625 aaKnown RBP14.22□□□□□ -0.13
RAB5C-203ENST00000546881 PARK7Q99497 189 aaKnown RBP14.22□□□□□ -0.13
RAB5C-203ENST00000546881 COPRSQ9NQ92 184 aa14.22□□□□□ -0.13
RAB5C-203ENST00000546881 ZHX2Q9Y6X8 837 aa14.22□□□□□ -0.13
RAB5C-203ENST00000546881 DOCK2Q92608 1830 aa14.22□□□□□ -0.13
RAB5C-203ENST00000546881 MYPNQ86TC9 1320 aa14.21□□□□□ -0.13
RAB5C-203ENST00000546881 SRGAP3O43295 1099 aa14.21□□□□□ -0.13
RAB5C-203ENST00000546881 CYP2C8P10632 490 aa14.21□□□□□ -0.13
RAB5C-203ENST00000546881 HOXD10P28358 340 aa14.21□□□□□ -0.13
RAB5C-203ENST00000546881 BTDP43251 543 aa14.21□□□□□ -0.13
RAB5C-203ENST00000546881 TFCP2Q12800 502 aa14.21□□□□□ -0.13
RAB5C-203ENST00000546881 MOGSQ13724 837 aa14.21□□□□□ -0.13
RAB5C-203ENST00000546881 SLF2Q8IX21 1173 aa14.21□□□□□ -0.13
RAB5C-203ENST00000546881 SCYL3Q8IZE3 742 aa14.21□□□□□ -0.13
RAB5C-203ENST00000546881 NEUROD6Q96NK8 337 aa14.21□□□□□ -0.13
RAB5C-203ENST00000546881 BIN2Q9UBW5 565 aaPredicted RBP14.21□□□□□ -0.13
RAB5C-203ENST00000546881 SRRDQ9UH36 339 aa14.21□□□□□ -0.13
RAB5C-203ENST00000546881 MYH2Q9UKX2 1941 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms