RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	PPFIBP1	Q86W92	1011 aa		11.59	□□□□□ -0.55
UBC-213	ENST00000546120	CERS3	Q8IU89	383 aa		11.59	□□□□□ -0.55
UBC-213	ENST00000546120	COG1	Q8WTW3	980 aa		11.59	□□□□□ -0.55
UBC-213	ENST00000546120	USP28	Q96RU2	1077 aa		11.59	□□□□□ -0.55
UBC-213	ENST00000546120	ACTR5	Q9H9F9	607 aa	Predicted RBP	11.59	□□□□□ -0.55
UBC-213	ENST00000546120	VEZT	Q9HBM0	779 aa		11.59	□□□□□ -0.55
UBC-213	ENST00000546120	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.59	□□□□□ -0.55
UBC-213	ENST00000546120	SALL1	Q9NSC2	1324 aa		11.59	□□□□□ -0.55
UBC-213	ENST00000546120	GOLGA6L7	A0A1B0GV03	622 aa		11.58	□□□□□ -0.56
UBC-213	ENST00000546120	GNAT3	A8MTJ3	354 aa		11.58	□□□□□ -0.56
UBC-213	ENST00000546120	RNF40	O75150	1001 aa		11.58	□□□□□ -0.56
UBC-213	ENST00000546120	SLC8A1	P32418	973 aa		11.58	□□□□□ -0.56
UBC-213	ENST00000546120	NF2	P35240	595 aa		11.58	□□□□□ -0.56
UBC-213	ENST00000546120	HSPA2	P54652	639 aa		11.58	□□□□□ -0.56
UBC-213	ENST00000546120	GYS2	P54840	703 aa		11.58	□□□□□ -0.56
UBC-213	ENST00000546120	SKOR1	P84550	965 aa		11.58	□□□□□ -0.56
UBC-213	ENST00000546120	NMI	Q13287	307 aa	Predicted RBP	11.58	□□□□□ -0.56
UBC-213	ENST00000546120	STIM1	Q13586	685 aa		11.58	□□□□□ -0.56
UBC-213	ENST00000546120	NBPF9	Q3BBW0	867 aa		11.58	□□□□□ -0.56
UBC-213	ENST00000546120	TPRN	Q4KMQ1	711 aa		11.58	□□□□□ -0.56
UBC-213	ENST00000546120	FAM173B	Q6P4H8	233 aa		11.58	□□□□□ -0.56
UBC-213	ENST00000546120	ARMC9	Q7Z3E5	817 aa		11.58	□□□□□ -0.56
UBC-213	ENST00000546120	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.58	□□□□□ -0.56	2e-7	■■■■■ 43.6
UBC-213	ENST00000546120	DHX58	Q96C10	678 aa		11.58	□□□□□ -0.56
UBC-213	ENST00000546120	DSCC1	Q9BVC3	393 aa		11.58	□□□□□ -0.56
UBC-213	ENST00000546120	ABCB6	Q9NP58	842 aa		11.58	□□□□□ -0.56
UBC-213	ENST00000546120	FAM169A	Q9Y6X4	670 aa		11.58	□□□□□ -0.56
UBC-213	ENST00000546120	ABCC6	O95255	1503 aa		11.58	□□□□□ -0.56
UBC-213	ENST00000546120	LMTK3	Q96Q04	1460 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	C3	P01024	1663 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	CDKL5	O76039	1030 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	PRPF6	O94906	941 aa	Known RBP	11.57	□□□□□ -0.56
UBC-213	ENST00000546120	CPA1	P15085	419 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	ATP5J	P18859	108 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	SYK	P43405	635 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	CDR1	P51861	262 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	SMTN	P53814	917 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	NNT	Q13423	1086 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	SLC39A14	Q15043	492 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	NT5DC1	Q5TFE4	455 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	LRCH2	Q5VUJ6	765 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120		Q6ZUG5	572 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	MCM10	Q7L590	875 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	TC2N	Q8N9U0	490 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	LRRN4CL	Q8ND94	238 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	WDR24	Q96S15	920 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	FSD1	Q9BTV5	496 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	HELLS	Q9NRZ9	838 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	STK26	Q9P289	416 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	ADGRG1	Q9Y653	693 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	RGPD1	P0DJD0	1748 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	UTY	O14607	1347 aa		11.57	□□□□□ -0.56
UBC-213	ENST00000546120	PTPDC1	A2A3K4	754 aa		11.56	□□□□□ -0.56
UBC-213	ENST00000546120	EXOC5	O00471	708 aa		11.56	□□□□□ -0.56
UBC-213	ENST00000546120	SSR1	P43307	286 aa	Known RBP	11.56	□□□□□ -0.56
UBC-213	ENST00000546120	NDUFA8	P51970	172 aa		11.56	□□□□□ -0.56
UBC-213	ENST00000546120	SLC8A3	P57103	927 aa		11.56	□□□□□ -0.56
UBC-213	ENST00000546120	SPAG1	Q07617	926 aa		11.56	□□□□□ -0.56
UBC-213	ENST00000546120	IDI1	Q13907	227 aa		11.56	□□□□□ -0.56
UBC-213	ENST00000546120	MCMDC2	Q4G0Z9	681 aa		11.56	□□□□□ -0.56
UBC-213	ENST00000546120	PREPL	Q4J6C6	727 aa	Predicted RBP	11.56	□□□□□ -0.56
UBC-213	ENST00000546120	BEND3	Q5T5X7	828 aa		11.56	□□□□□ -0.56
UBC-213	ENST00000546120	ANO1	Q5XXA6	986 aa		11.56	□□□□□ -0.56
UBC-213	ENST00000546120	GGT6	Q6P531	493 aa		11.56	□□□□□ -0.56
UBC-213	ENST00000546120	MON2	Q7Z3U7	1717 aa		11.56	□□□□□ -0.56
UBC-213	ENST00000546120	KIAA1328	Q86T90	577 aa		11.56	□□□□□ -0.56
UBC-213	ENST00000546120	OTUD6B	Q8N6M0	293 aa		11.56	□□□□□ -0.56
UBC-213	ENST00000546120	IQCD	Q96DY2	449 aa		11.56	□□□□□ -0.56
UBC-213	ENST00000546120	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.56	□□□□□ -0.56
UBC-213	ENST00000546120	CAPS2	Q9BXY5	557 aa		11.56	□□□□□ -0.56
UBC-213	ENST00000546120	HPSE	Q9Y251	543 aa		11.56	□□□□□ -0.56
UBC-213	ENST00000546120	LRRC37A3	O60309	1634 aa		11.56	□□□□□ -0.56
UBC-213	ENST00000546120	CDHR2	Q9BYE9	1310 aa		11.56	□□□□□ -0.56
UBC-213	ENST00000546120	OVOS2	A0A0G2JMS6	1433 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	OVOS2	A0A0J9YW53	1432 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	TECPR2	O15040	1411 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	OVOS2	Q6IE36	1432 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	ANO9	A1A5B4	782 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	GOLGA6C	A6NDK9	693 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120		H0YHG0	523 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	TULP1	O00294	542 aa	Predicted RBP	11.55	□□□□□ -0.56
UBC-213	ENST00000546120	EIF3H	O15372	352 aa	Known RBP eCLIP	11.55	□□□□□ -0.56
UBC-213	ENST00000546120	GOLGA6D	P0CG33	693 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	GCFC2	P16383	781 aa	Known RBP	11.55	□□□□□ -0.56
UBC-213	ENST00000546120	ZNF18	P17022	549 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	GPT	P24298	496 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	LMOD1	P29536	600 aa	Predicted RBP	11.55	□□□□□ -0.56
UBC-213	ENST00000546120	IRAK1	P51617	712 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	USP14	P54578	494 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	EXOSC10	Q01780	885 aa	Known RBP	11.55	□□□□□ -0.56
UBC-213	ENST00000546120	ICA1	Q05084	483 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	SCRN1	Q12765	414 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	WLS	Q5T9L3	541 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	CPLX2	Q6PUV4	134 aa	Known RBP	11.55	□□□□□ -0.56
UBC-213	ENST00000546120	APLF	Q8IW19	511 aa	Predicted RBP	11.55	□□□□□ -0.56
UBC-213	ENST00000546120	TEX11	Q8IYF3	940 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	TCP11	Q8WWU5	503 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	PSMD1	Q99460	953 aa		11.55	□□□□□ -0.56
UBC-213	ENST00000546120	PYM1	Q9BRP8	204 aa	Known RBP	11.55	□□□□□ -0.56
UBC-213	ENST00000546120	TOMM22	Q9NS69	142 aa		11.55	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms