RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 PNMA6AP0CW24 399 aaPredicted RBP10.09□□□□□ -0.79
TDP1-204ENST00000545686 PTPAQ15257 358 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 WASHC4Q2M389 1173 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 CPLX2Q6PUV4 134 aaKnown RBP10.09□□□□□ -0.79
TDP1-204ENST00000545686 VPS37DQ86XT2 251 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 MNS1Q8NEH6 495 aa10.09□□□□□ -0.79
TDP1-204ENST00000545686 NOL10Q9BSC4 688 aaKnown RBP10.09□□□□□ -0.79
TDP1-204ENST00000545686 ANGEL1Q9UNK9 670 aaKnown RBP10.09□□□□□ -0.79
TDP1-204ENST00000545686 PPFIA3O75145 1194 aa10.08□□□□□ -0.8
TDP1-204ENST00000545686 TOP1P11387 765 aaKnown RBP10.08□□□□□ -0.8
TDP1-204ENST00000545686 ATP1A3P13637 1013 aa10.08□□□□□ -0.8
TDP1-204ENST00000545686 HAND2P61296 217 aa10.08□□□□□ -0.8
TDP1-204ENST00000545686 FKBP4Q02790 459 aaKnown RBP eCLIP10.08□□□□□ -0.8
TDP1-204ENST00000545686 TMCO3Q6UWJ1 677 aa10.08□□□□□ -0.8
TDP1-204ENST00000545686 REXO1L1PQ8IX06 675 aa10.08□□□□□ -0.8
TDP1-204ENST00000545686 CALCOCO1Q9P1Z2 691 aa10.08□□□□□ -0.8
TDP1-204ENST00000545686 HOOK1Q9UJC3 728 aaKnown RBP10.08□□□□□ -0.8
TDP1-204ENST00000545686 MYH2Q9UKX2 1941 aa10.08□□□□□ -0.8
TDP1-204ENST00000545686 STK36Q9NRP7 1315 aa10.08□□□□□ -0.8
TDP1-204ENST00000545686 COL22A1Q8NFW1 1626 aaPredicted RBP10.08□□□□□ -0.8
TDP1-204ENST00000545686 ZC3H6P61129 1189 aaKnown RBP10.08□□□□□ -0.8
TDP1-204ENST00000545686 TRDNQ13061 729 aa10.08□□□□□ -0.8
TDP1-204ENST00000545686 CFAP100Q494V2 611 aa10.08□□□□□ -0.8
TDP1-204ENST00000545686 GORABQ5T7V8 394 aa10.08□□□□□ -0.8
TDP1-204ENST00000545686 SHC4Q6S5L8 630 aa10.08□□□□□ -0.8
TDP1-204ENST00000545686 XAGE2Q96GT9 111 aa10.08□□□□□ -0.8
TDP1-204ENST00000545686 MAP3K14Q99558 947 aa10.08□□□□□ -0.8
TDP1-204ENST00000545686 ALG1Q9BT22 464 aa10.08□□□□□ -0.8
TDP1-204ENST00000545686 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.08□□□□□ -0.8
TDP1-204ENST00000545686 C19orf44Q9H6X5 657 aa10.08□□□□□ -0.8
TDP1-204ENST00000545686 GPAA1O43292 621 aa10.07□□□□□ -0.8
TDP1-204ENST00000545686 METAP2P50579 478 aaKnown RBP eCLIP10.07□□□□□ -0.8
TDP1-204ENST00000545686 TBX2Q13207 712 aaPredicted RBP10.07□□□□□ -0.8
TDP1-204ENST00000545686 LRRN4CLQ8ND94 238 aa10.07□□□□□ -0.8
TDP1-204ENST00000545686 ZNF594Q96JF6 807 aaPredicted RBP10.07□□□□□ -0.8
TDP1-204ENST00000545686 PARP3Q9Y6F1 533 aa10.07□□□□□ -0.8
TDP1-204ENST00000545686 NID2Q14112 1375 aa10.07□□□□□ -0.8
TDP1-204ENST00000545686 RIC1Q4ADV7 1423 aa10.07□□□□□ -0.8
TDP1-204ENST00000545686 TNS2Q63HR2 1409 aa10.07□□□□□ -0.8
TDP1-204ENST00000545686 SH2B2O14492 632 aaPredicted RBP10.07□□□□□ -0.8
TDP1-204ENST00000545686 MARCKSP29966 332 aaPredicted RBP10.07□□□□□ -0.8
TDP1-204ENST00000545686 CYP2C19P33261 490 aa10.07□□□□□ -0.8
TDP1-204ENST00000545686 CCDC57Q2TAC2 916 aa10.07□□□□□ -0.8
TDP1-204ENST00000545686 CCDC102BQ68D86 513 aa10.07□□□□□ -0.8
TDP1-204ENST00000545686 KRT40Q6A162 431 aa10.07□□□□□ -0.8
TDP1-204ENST00000545686 KRBA2Q6ZNG9 492 aa10.07□□□□□ -0.8
TDP1-204ENST00000545686 TTLL7Q6ZT98 887 aa10.07□□□□□ -0.8
TDP1-204ENST00000545686 TMEM139Q8IV31 216 aa10.07□□□□□ -0.8
TDP1-204ENST00000545686 DPF2Q92785 391 aa10.07□□□□□ -0.8
TDP1-204ENST00000545686 TMEM87BQ96K49 555 aa10.07□□□□□ -0.8
TDP1-204ENST00000545686 ZNF512BQ96KM6 892 aaPredicted RBP10.07□□□□□ -0.8
TDP1-204ENST00000545686 PLA2G12BQ9BX93 195 aa10.07□□□□□ -0.8
TDP1-204ENST00000545686 BCL11BQ9C0K0 894 aaPredicted RBP10.07□□□□□ -0.8
TDP1-204ENST00000545686 DACH1Q9UI36 760 aa10.07□□□□□ -0.8
TDP1-204ENST00000545686 MYH13Q9UKX3 1938 aa10.06□□□□□ -0.8
TDP1-204ENST00000545686 STX10O60499 249 aa10.06□□□□□ -0.8
TDP1-204ENST00000545686 PNOCQ13519 176 aa10.06□□□□□ -0.8
TDP1-204ENST00000545686 METTL16Q86W50 562 aaKnown RBP10.06□□□□□ -0.8
TDP1-204ENST00000545686 ISCA1Q9BUE6 129 aa10.06□□□□□ -0.8
TDP1-204ENST00000545686 PUS7LQ9H0K6 701 aaKnown RBP10.06□□□□□ -0.8
TDP1-204ENST00000545686 DNAJC5Q9H3Z4 198 aa10.06□□□□□ -0.8
TDP1-204ENST00000545686 PPP2R2CQ9Y2T4 447 aa10.06□□□□□ -0.8
TDP1-204ENST00000545686 VWA3AA6NCI4 1184 aa10.06□□□□□ -0.8
TDP1-204ENST00000545686 URI1O94763 535 aaPredicted RBP10.06□□□□□ -0.8
TDP1-204ENST00000545686 CSB-PGBD3P0DP91 1061 aa10.06□□□□□ -0.8
TDP1-204ENST00000545686 PLA2G4AP47712 749 aa10.06□□□□□ -0.8
TDP1-204ENST00000545686 GNL2Q13823 731 aaKnown RBP10.06□□□□□ -0.8
TDP1-204ENST00000545686 TRIM29Q14134 588 aa10.06□□□□□ -0.8
TDP1-204ENST00000545686 TEX35Q5T0J7 233 aa10.06□□□□□ -0.8
TDP1-204ENST00000545686 APOA5Q6Q788 366 aa10.06□□□□□ -0.8
TDP1-204ENST00000545686 GPR161Q8N6U8 529 aaKnown RBP10.06□□□□□ -0.8
TDP1-204ENST00000545686 UTP14AQ9BVJ6 771 aaKnown RBP10.06□□□□□ -0.8
TDP1-204ENST00000545686 PUS3Q9BZE2 481 aaKnown RBP10.06□□□□□ -0.8
TDP1-204ENST00000545686 UBXN6Q9BZV1 441 aa10.06□□□□□ -0.8
TDP1-204ENST00000545686 NBPF3Q9H094 633 aa10.06□□□□□ -0.8
TDP1-204ENST00000545686 GJB4Q9NTQ9 266 aa10.06□□□□□ -0.8
TDP1-204ENST00000545686 KCNH3Q9ULD8 1083 aa10.06□□□□□ -0.8
TDP1-204ENST00000545686 MYH8P13535 1937 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 NPHP1O15259 732 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 ADORA1P30542 326 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 TRIM28Q13263 835 aaKnown RBP10.05□□□□□ -0.8
TDP1-204ENST00000545686 TTF1Q15361 905 aaPredicted RBP10.05□□□□□ -0.8
TDP1-204ENST00000545686 NT5DC1Q5TFE4 455 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 SGMS1Q86VZ5 419 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 TRIML1Q8N9V2 468 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 CNNM3Q8NE01 707 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 BCORQ6W2J9 1755 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 DCCP43146 1447 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 TNS3Q68CZ2 1445 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 PCDH11XQ9BZA7 1347 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 PCDH11YQ9BZA8 1340 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 ERVV-2B6SEH9 535 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 FANCGO15287 622 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 ADD2P35612 726 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 ZAP70P43403 619 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 MAP3K9P80192 1104 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 JAKMIP3Q5VZ66 844 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 KRI1Q8N9T8 703 aaKnown RBP10.05□□□□□ -0.8
TDP1-204ENST00000545686 MLKLQ8NB16 471 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 WASF1Q92558 559 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms