RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 DOCK2Q92608 1830 aa26.18■■□□□ 1.78
SCARB1-210ENST00000545493 RFX7Q2KHR2 1363 aa26.18■■□□□ 1.78
SCARB1-210ENST00000545493 ALDH1A1P00352 501 aa26.17■■□□□ 1.78
SCARB1-210ENST00000545493 INHBEP58166 350 aa26.16■■□□□ 1.78
SCARB1-210ENST00000545493 NFIAQ12857 509 aa26.16■■□□□ 1.78
SCARB1-210ENST00000545493 CDC42EP5Q6NZY7 148 aa26.16■■□□□ 1.78
SCARB1-210ENST00000545493 GAKO14976 1311 aa26.15■■□□□ 1.78
SCARB1-210ENST00000545493 TESPA1A2RU30 521 aaPredicted RBP26.15■■□□□ 1.78
SCARB1-210ENST00000545493 RLBP1P12271 317 aa26.15■■□□□ 1.78
SCARB1-210ENST00000545493 MAP3K9P80192 1104 aa26.15■■□□□ 1.78
SCARB1-210ENST00000545493 PTPN18Q99952 460 aa26.15■■□□□ 1.78
SCARB1-210ENST00000545493 AKAP2Q9Y2D5 859 aa26.15■■□□□ 1.78
SCARB1-210ENST00000545493 SNCAIPQ9Y6H5 919 aa26.15■■□□□ 1.78
SCARB1-210ENST00000545493 MVPQ14764 893 aaKnown RBP26.14■■□□□ 1.78
SCARB1-210ENST00000545493 ZGPATQ8N5A5 531 aaKnown RBP26.14■■□□□ 1.78
SCARB1-210ENST00000545493 MS4A4AQ96JQ5 239 aa26.14■■□□□ 1.78
SCARB1-210ENST00000545493 WRNIP1Q96S55 665 aa26.14■■□□□ 1.78
SCARB1-210ENST00000545493 C1orf115Q9H7X2 142 aa26.14■■□□□ 1.78
SCARB1-210ENST00000545493 CSADQ9Y600 493 aa26.14■■□□□ 1.78
SCARB1-210ENST00000545493 POLA2Q14181 598 aa26.13■■□□□ 1.77
SCARB1-210ENST00000545493 FTSJ3Q8IY81 847 aaKnown RBP26.13■■□□□ 1.77
SCARB1-210ENST00000545493 FAM151AQ8WW52 585 aa26.13■■□□□ 1.77
SCARB1-210ENST00000545493 FAM198AQ9UFP1 575 aa26.13■■□□□ 1.77
SCARB1-210ENST00000545493 MAST2Q6P0Q8 1798 aa26.12■■□□□ 1.77
SCARB1-210ENST00000545493 CENPFP49454 3210 aa26.12■■□□□ 1.77
SCARB1-210ENST00000545493 SPDYE5A6NIY4 337 aa26.12■■□□□ 1.77
SCARB1-210ENST00000545493 FKTNO75072 461 aa26.12■■□□□ 1.77
SCARB1-210ENST00000545493 RGS19P49795 217 aa26.12■■□□□ 1.77
SCARB1-210ENST00000545493 OTUD5Q96G74 571 aa26.12■■□□□ 1.77
SCARB1-210ENST00000545493 ATRNL1Q5VV63 1379 aa26.11■■□□□ 1.77
SCARB1-210ENST00000545493 TCP10Q12799 353 aa26.11■■□□□ 1.77
SCARB1-210ENST00000545493 CRHR2Q13324 411 aa26.11■■□□□ 1.77
SCARB1-210ENST00000545493 PI16Q6UXB8 463 aa26.11■■□□□ 1.77
SCARB1-210ENST00000545493 BRI3BPQ8WY22 251 aa26.11■■□□□ 1.77
SCARB1-210ENST00000545493 TNRC18O15417 2968 aaPredicted RBP26.1■■□□□ 1.77
SCARB1-210ENST00000545493 DCAF15Q66K64 600 aa26.1■■□□□ 1.77
SCARB1-210ENST00000545493 DZIP1Q86YF9 867 aaKnown RBP26.1■■□□□ 1.77
SCARB1-210ENST00000545493 ITPRIPQ8IWB1 547 aa26.1■■□□□ 1.77
SCARB1-210ENST00000545493 SSH3Q8TE77 659 aa26.1■■□□□ 1.77
SCARB1-210ENST00000545493 ZKSCAN4Q969J2 545 aaPredicted RBP26.1■■□□□ 1.77
SCARB1-210ENST00000545493 HOOK2Q96ED9 719 aa26.1■■□□□ 1.77
SCARB1-210ENST00000545493 NEUROD6Q96NK8 337 aa26.1■■□□□ 1.77
SCARB1-210ENST00000545493 USP40Q9NVE5 1235 aa26.1■■□□□ 1.77
SCARB1-210ENST00000545493 ABCF2Q9UG63 623 aa26.1■■□□□ 1.77
SCARB1-210ENST00000545493 HPS5Q9UPZ3 1129 aa26.1■■□□□ 1.77
SCARB1-210ENST00000545493 AK9Q5TCS8 1911 aa26.1■■□□□ 1.77
SCARB1-210ENST00000545493 ARID4AP29374 1257 aaPredicted RBP26.09■■□□□ 1.77
SCARB1-210ENST00000545493 G3BP1Q13283 466 aaKnown RBP eCLIP26.09■■□□□ 1.77
SCARB1-210ENST00000545493 MIGA2Q7L4E1 593 aa26.09■■□□□ 1.77
SCARB1-210ENST00000545493 ZNF384Q8TF68 577 aa26.09■■□□□ 1.77
SCARB1-210ENST00000545493 ZNF341Q9BYN7 854 aa26.09■■□□□ 1.77
SCARB1-210ENST00000545493 HMG20BQ9P0W2 317 aa26.09■■□□□ 1.77
SCARB1-210ENST00000545493 BRCA2P51587 3418 aa26.09■■□□□ 1.77
SCARB1-210ENST00000545493 CCL15-CCL14A0A0B4J2E2 113 aa26.08■■□□□ 1.77
SCARB1-210ENST00000545493 CCL15Q16663 113 aa26.08■■□□□ 1.77
SCARB1-210ENST00000545493 ZFPM1Q8IX07 1006 aa26.08■■□□□ 1.77
SCARB1-210ENST00000545493 MROH7-TTC4A0A0A0MT08 1334 aa26.08■■□□□ 1.77
SCARB1-210ENST00000545493 INPP5BP32019 993 aa26.07■■□□□ 1.76
SCARB1-210ENST00000545493 PKN2Q16513 984 aaKnown RBP26.07■■□□□ 1.76
SCARB1-210ENST00000545493 OTUD7BQ6GQQ9 843 aa26.07■■□□□ 1.76
SCARB1-210ENST00000545493 ZBTB7BO15156 539 aaPredicted RBP26.06■■□□□ 1.76
SCARB1-210ENST00000545493 MCAMP43121 646 aa26.06■■□□□ 1.76
SCARB1-210ENST00000545493 GTF2A2P52657 109 aa26.06■■□□□ 1.76
SCARB1-210ENST00000545493 SOX10P56693 466 aa26.06■■□□□ 1.76
SCARB1-210ENST00000545493 ATP8B2P98198 1209 aa26.06■■□□□ 1.76
SCARB1-210ENST00000545493 ERO1BQ86YB8 467 aa26.06■■□□□ 1.76
SCARB1-210ENST00000545493 SPATA5Q8NB90 893 aa26.06■■□□□ 1.76
SCARB1-210ENST00000545493 IDI2Q9BXS1 227 aa26.06■■□□□ 1.76
SCARB1-210ENST00000545493 BTDP43251 543 aa26.05■■□□□ 1.76
SCARB1-210ENST00000545493 RGS3P49796 1198 aa26.05■■□□□ 1.76
SCARB1-210ENST00000545493 MECOMQ03112 1051 aa26.05■■□□□ 1.76
SCARB1-210ENST00000545493 FAM43AQ8N2R8 423 aa26.05■■□□□ 1.76
SCARB1-210ENST00000545493 FAM163AQ96GL9 167 aaPredicted RBP26.05■■□□□ 1.76
SCARB1-210ENST00000545493 ZNF112Q9UJU3 913 aa26.05■■□□□ 1.76
SCARB1-210ENST00000545493 IRF6O14896 467 aa26.04■■□□□ 1.76
SCARB1-210ENST00000545493 WDHD1O75717 1129 aaPredicted RBP26.04■■□□□ 1.76
SCARB1-210ENST00000545493 MLLT1Q03111 559 aaPredicted RBP26.04■■□□□ 1.76
SCARB1-210ENST00000545493 PPIL2Q13356 520 aa26.04■■□□□ 1.76
SCARB1-210ENST00000545493 TNNI3KQ59H18 835 aa26.04■■□□□ 1.76
SCARB1-210ENST00000545493 SPTY2D1Q68D10 685 aaPredicted RBP26.04■■□□□ 1.76
SCARB1-210ENST00000545493 FBXO46Q6PJ61 603 aaPredicted RBP26.04■■□□□ 1.76
SCARB1-210ENST00000545493 ERICH6Q7L0X2 663 aa26.04■■□□□ 1.76
SCARB1-210ENST00000545493 GPR108Q9NPR9 543 aa26.04■■□□□ 1.76
SCARB1-210ENST00000545493 DDX4Q9NQI0 724 aaKnown RBP26.04■■□□□ 1.76
SCARB1-210ENST00000545493 FPGT-TNNI3KV9GXZ4 949 aa26.04■■□□□ 1.76
SCARB1-210ENST00000545493 CAP1Q01518 475 aa26.03■■□□□ 1.76
SCARB1-210ENST00000545493 GORABQ5T7V8 394 aa26.03■■□□□ 1.76
SCARB1-210ENST00000545493 TBC1D9Q6ZT07 1266 aa26.03■■□□□ 1.76
SCARB1-210ENST00000545493 SH3BP5LQ7L8J4 393 aa26.03■■□□□ 1.76
SCARB1-210ENST00000545493 DOCK1Q14185 1865 aa26.02■■□□□ 1.76
SCARB1-210ENST00000545493 ENTPD3O75355 529 aa26.02■■□□□ 1.76
SCARB1-210ENST00000545493 RHBDL3P58872 404 aa26.02■■□□□ 1.76
SCARB1-210ENST00000545493 NOL9Q5SY16 702 aaKnown RBP26.02■■□□□ 1.76
SCARB1-210ENST00000545493 OTOP1Q7RTM1 612 aa26.02■■□□□ 1.76
SCARB1-210ENST00000545493 SLF2Q8IX21 1173 aa26.02■■□□□ 1.76
SCARB1-210ENST00000545493 CD99L2Q8TCZ2 262 aa26.02■■□□□ 1.76
SCARB1-210ENST00000545493 PANK1Q8TE04 598 aa26.02■■□□□ 1.76
SCARB1-210ENST00000545493 NSUN4Q96CB9 384 aaKnown RBP26.02■■□□□ 1.76
SCARB1-210ENST00000545493 DBNDD2Q9BQY9 259 aa26.02■■□□□ 1.76
SCARB1-210ENST00000545493 ZSWIM8A7E2V4 1837 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms