RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 CCDC97Q96F63 343 aaPredicted RBP9.74□□□□□ -0.85
SNHG1-223ENST00000545440 EYA3Q99504 573 aa9.74□□□□□ -0.85
SNHG1-223ENST00000545440 GREM2Q9H772 168 aa9.74□□□□□ -0.85
SNHG1-223ENST00000545440 IL21Q9HBE4 155 aa9.74□□□□□ -0.85
SNHG1-223ENST00000545440 POLLQ9UGP5 575 aa9.74□□□□□ -0.85
SNHG1-223ENST00000545440 XDHP47989 1333 aa9.74□□□□□ -0.85
SNHG1-223ENST00000545440 PASKQ96RG2 1323 aa9.74□□□□□ -0.85
SNHG1-223ENST00000545440 YDJCA8MPS7 323 aa9.73□□□□□ -0.85
SNHG1-223ENST00000545440 F6X3S4 739 aa9.73□□□□□ -0.85
SNHG1-223ENST00000545440 UFL1O94874 794 aa9.73□□□□□ -0.85
SNHG1-223ENST00000545440 CXCL9Q07325 125 aa9.73□□□□□ -0.85
SNHG1-223ENST00000545440 SLFN5Q08AF3 891 aa9.73□□□□□ -0.85
SNHG1-223ENST00000545440 TNIP1Q15025 636 aa9.73□□□□□ -0.85
SNHG1-223ENST00000545440 MSS51Q4VC12 460 aa9.73□□□□□ -0.85
SNHG1-223ENST00000545440 BEND3Q5T5X7 828 aa9.73□□□□□ -0.85
SNHG1-223ENST00000545440 CIAPIN1Q6FI81 312 aa9.73□□□□□ -0.85
SNHG1-223ENST00000545440 LRRN4Q8WUT4 740 aa9.73□□□□□ -0.85
SNHG1-223ENST00000545440 KLRG1Q96E93 195 aa9.73□□□□□ -0.85
SNHG1-223ENST00000545440 CCDC85AQ96PX6 553 aaPredicted RBP9.73□□□□□ -0.85
SNHG1-223ENST00000545440 GPRC5DQ9NZD1 345 aa9.73□□□□□ -0.85
SNHG1-223ENST00000545440 ANKIB1Q9P2G1 1089 aa9.73□□□□□ -0.85
SNHG1-223ENST00000545440 GGA1Q9UJY5 639 aa9.73□□□□□ -0.85
SNHG1-223ENST00000545440 MED23Q9ULK4 1368 aa9.73□□□□□ -0.85
SNHG1-223ENST00000545440 ECE2O60344 883 aa9.72□□□□□ -0.85
SNHG1-223ENST00000545440 CTHP32929 405 aa9.72□□□□□ -0.85
SNHG1-223ENST00000545440 PTPRNQ16849 979 aa9.72□□□□□ -0.85
SNHG1-223ENST00000545440 USP50Q70EL3 339 aaPredicted RBP9.72□□□□□ -0.85
SNHG1-223ENST00000545440 ARMC2Q8NEN0 867 aa9.72□□□□□ -0.85
SNHG1-223ENST00000545440 BSDC1Q9NW68 430 aaPredicted RBP9.72□□□□□ -0.85
SNHG1-223ENST00000545440 HCSTQ9UBK5 93 aa9.72□□□□□ -0.85
SNHG1-223ENST00000545440 PTPRCP08575 1304 aa9.72□□□□□ -0.85
SNHG1-223ENST00000545440 GRM8O00222 908 aa9.71□□□□□ -0.86
SNHG1-223ENST00000545440 ALDH1L1O75891 902 aa9.71□□□□□ -0.86
SNHG1-223ENST00000545440 RAD17O75943 681 aa9.71□□□□□ -0.86
SNHG1-223ENST00000545440 ITGBL1O95965 494 aaPredicted RBP9.71□□□□□ -0.86
SNHG1-223ENST00000545440 CSF1RP07333 972 aa9.71□□□□□ -0.86
SNHG1-223ENST00000545440 CT47B1P0C2W7 299 aaPredicted RBP9.71□□□□□ -0.86
SNHG1-223ENST00000545440 ITGA6P23229 1130 aa9.71□□□□□ -0.86
SNHG1-223ENST00000545440 IGHMBP2P38935 993 aaKnown RBP9.71□□□□□ -0.86
SNHG1-223ENST00000545440 EPS15P42566 896 aa9.71□□□□□ -0.86
SNHG1-223ENST00000545440 GMPSP49915 693 aaPredicted RBP9.71□□□□□ -0.86
SNHG1-223ENST00000545440 HTRA3P83110 453 aa9.71□□□□□ -0.86
SNHG1-223ENST00000545440 MTRQ99707 1265 aa9.71□□□□□ -0.86
SNHG1-223ENST00000545440 BCL2L13Q9BXK5 485 aa9.71□□□□□ -0.86
SNHG1-223ENST00000545440 DBNDD1Q9H9R9 158 aa9.71□□□□□ -0.86
SNHG1-223ENST00000545440 ADARB2Q9NS39 739 aaKnown RBP9.71□□□□□ -0.86
SNHG1-223ENST00000545440 ADH1BP00325 375 aa9.7□□□□□ -0.86
SNHG1-223ENST00000545440 ATP2B4P23634 1241 aa9.7□□□□□ -0.86
SNHG1-223ENST00000545440 RPS12P25398 132 aaKnown RBP9.7□□□□□ -0.86
SNHG1-223ENST00000545440 ALDH1L2Q3SY69 923 aa9.7□□□□□ -0.86
SNHG1-223ENST00000545440 TRMT2AQ8IZ69 625 aaKnown RBP9.7□□□□□ -0.86
SNHG1-223ENST00000545440 CNTROBQ8N137 903 aa9.7□□□□□ -0.86
SNHG1-223ENST00000545440 JMYQ8N9B5 988 aa9.7□□□□□ -0.86
SNHG1-223ENST00000545440 ZNF592Q92610 1267 aa9.7□□□□□ -0.86
SNHG1-223ENST00000545440 THAP11Q96EK4 314 aa9.7□□□□□ -0.86
SNHG1-223ENST00000545440 GPR101Q96P66 508 aaPredicted RBP9.7□□□□□ -0.86
SNHG1-223ENST00000545440 ARID3AQ99856 593 aa9.7□□□□□ -0.86
SNHG1-223ENST00000545440 ZC3H12CQ9C0D7 883 aaKnown RBP9.7□□□□□ -0.86
SNHG1-223ENST00000545440 SRCIN1Q9C0H9 1055 aa9.7□□□□□ -0.86
SNHG1-223ENST00000545440 SERPINA10Q9UK55 444 aa9.7□□□□□ -0.86
SNHG1-223ENST00000545440 ANKRD18BA2A2Z9 1011 aa9.69□□□□□ -0.86
SNHG1-223ENST00000545440 PSMD14O00487 310 aa9.69□□□□□ -0.86
SNHG1-223ENST00000545440 UTYO14607 1347 aa9.69□□□□□ -0.86
SNHG1-223ENST00000545440 PCNTO95613 3336 aa9.69□□□□□ -0.86
SNHG1-223ENST00000545440 FOXO4P98177 505 aa9.69□□□□□ -0.86
SNHG1-223ENST00000545440 NR6A1Q15406 480 aa9.69□□□□□ -0.86
SNHG1-223ENST00000545440 MAP1SQ66K74 1059 aaPredicted RBP9.69□□□□□ -0.86
SNHG1-223ENST00000545440 SLC4A10Q6U841 1118 aa9.69□□□□□ -0.86
SNHG1-223ENST00000545440 HOMEZQ8IX15 550 aa9.69□□□□□ -0.86
SNHG1-223ENST00000545440 SSH1Q8WYL5 1049 aa9.69□□□□□ -0.86
SNHG1-223ENST00000545440 DPF2Q92785 391 aa9.69□□□□□ -0.86
SNHG1-223ENST00000545440 MPHOSPH8Q99549 860 aa9.69□□□□□ -0.86
SNHG1-223ENST00000545440 C9orf78Q9NZ63 289 aaPredicted RBP9.69□□□□□ -0.86
SNHG1-223ENST00000545440 MINPP1Q9UNW1 487 aa9.69□□□□□ -0.86
SNHG1-223ENST00000545440 CNTNAP1P78357 1384 aa9.68□□□□□ -0.86
SNHG1-223ENST00000545440 TMEM88BA6NKF7 163 aa9.68□□□□□ -0.86
SNHG1-223ENST00000545440 CCNYL3P0C7X3 344 aa9.68□□□□□ -0.86
SNHG1-223ENST00000545440 CCT4P50991 539 aaKnown RBP9.68□□□□□ -0.86
SNHG1-223ENST00000545440 IFIT5Q13325 482 aaKnown RBP9.68□□□□□ -0.86
SNHG1-223ENST00000545440 CALR3Q96L12 384 aaKnown RBP9.68□□□□□ -0.86
SNHG1-223ENST00000545440 NUDT12Q9BQG2 462 aa9.68□□□□□ -0.86
SNHG1-223ENST00000545440 SLC6A16Q9GZN6 736 aa9.68□□□□□ -0.86
SNHG1-223ENST00000545440 ANKRD2Q9GZV1 360 aa9.68□□□□□ -0.86
SNHG1-223ENST00000545440 HMX1Q9NP08 348 aaPredicted RBP9.68□□□□□ -0.86
SNHG1-223ENST00000545440 CNOT7Q9UIV1 285 aaKnown RBP9.68□□□□□ -0.86
SNHG1-223ENST00000545440 LEMD3Q9Y2U8 911 aa9.68□□□□□ -0.86
SNHG1-223ENST00000545440 AKAP11Q9UKA4 1901 aa9.68□□□□□ -0.86
SNHG1-223ENST00000545440 LAMB1P07942 1786 aa9.68□□□□□ -0.86
SNHG1-223ENST00000545440 ZNF804BA4D1E1 1349 aa9.67□□□□□ -0.86
SNHG1-223ENST00000545440 H7C1D1 291 aa9.67□□□□□ -0.86
SNHG1-223ENST00000545440 VIL1P09327 827 aaKnown RBP9.67□□□□□ -0.86
SNHG1-223ENST00000545440 DIEXFQ68CQ4 756 aaKnown RBP9.67□□□□□ -0.86
SNHG1-223ENST00000545440 PODNQ7Z5L7 613 aa9.67□□□□□ -0.86
SNHG1-223ENST00000545440 AGBL3Q8NEM8 1001 aa9.67□□□□□ -0.86
SNHG1-223ENST00000545440 TRPM4Q8TD43 1214 aa9.67□□□□□ -0.86
SNHG1-223ENST00000545440 SMC4Q9NTJ3 1288 aa9.67□□□□□ -0.86
SNHG1-223ENST00000545440 PGAP2Q9UHJ9 254 aa9.67□□□□□ -0.86
SNHG1-223ENST00000545440 PAPPA2Q9BXP8 1791 aa9.66□□□□□ -0.86
SNHG1-223ENST00000545440 SHTN1A0MZ66 631 aa9.66□□□□□ -0.86
SNHG1-223ENST00000545440 NBPF7P0C2Y1 421 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms