RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 MAP3K11Q16584 847 aa19.26■□□□□ 0.67
CCDC78-216ENST00000544996 LDLRAD1Q5T700 205 aa19.26■□□□□ 0.67
CCDC78-216ENST00000544996 CDC42EP5Q6NZY7 148 aa19.26■□□□□ 0.67
CCDC78-216ENST00000544996 TBC1D9Q6ZT07 1266 aa19.26■□□□□ 0.67
CCDC78-216ENST00000544996 RASAL3Q86YV0 1011 aa19.26■□□□□ 0.67
CCDC78-216ENST00000544996 HOOK2Q96ED9 719 aa19.26■□□□□ 0.67
CCDC78-216ENST00000544996 USP40Q9NVE5 1235 aa19.26■□□□□ 0.67
CCDC78-216ENST00000544996 RAI14Q9P0K7 980 aa19.26■□□□□ 0.67
CCDC78-216ENST00000544996 PCNTO95613 3336 aa19.26■□□□□ 0.67
CCDC78-216ENST00000544996 UNCXA6NJT0 531 aa19.25■□□□□ 0.67
CCDC78-216ENST00000544996 CA12O43570 354 aa19.25■□□□□ 0.67
CCDC78-216ENST00000544996 LDHCP07864 332 aa19.25■□□□□ 0.67
CCDC78-216ENST00000544996 KIF23Q02241 960 aaPredicted RBP19.25■□□□□ 0.67
CCDC78-216ENST00000544996 MECOMQ03112 1051 aa19.25■□□□□ 0.67
CCDC78-216ENST00000544996 REM2Q8IYK8 340 aaPredicted RBP19.25■□□□□ 0.67
CCDC78-216ENST00000544996 SLC10A4Q96EP9 437 aa19.25■□□□□ 0.67
CCDC78-216ENST00000544996 FAM163AQ96GL9 167 aaPredicted RBP19.25■□□□□ 0.67
CCDC78-216ENST00000544996 TEPSINQ96N21 525 aa19.25■□□□□ 0.67
CCDC78-216ENST00000544996 IL1RAPL2Q9NP60 686 aa19.25■□□□□ 0.67
CCDC78-216ENST00000544996 SNRKQ9NRH2 765 aa19.25■□□□□ 0.67
CCDC78-216ENST00000544996 TLR7Q9NYK1 1049 aaKnown RBP19.25■□□□□ 0.67
CCDC78-216ENST00000544996 FZD1Q9UP38 647 aa19.25■□□□□ 0.67
CCDC78-216ENST00000544996 THSD7BQ9C0I4 1608 aa19.25■□□□□ 0.67
CCDC78-216ENST00000544996 GAKO14976 1311 aa19.25■□□□□ 0.67
CCDC78-216ENST00000544996 ZIC5Q96T25 663 aa19.24■□□□□ 0.67
CCDC78-216ENST00000544996 USP2O75604 605 aaPredicted RBP19.23■□□□□ 0.67
CCDC78-216ENST00000544996 IFIT2P09913 472 aaKnown RBP19.23■□□□□ 0.67
CCDC78-216ENST00000544996 FAM151AQ8WW52 585 aa19.23■□□□□ 0.67
CCDC78-216ENST00000544996 SSC5DA1L4H1 1573 aa19.23■□□□□ 0.67
CCDC78-216ENST00000544996 MROH7-TTC4A0A0A0MT08 1334 aa19.23■□□□□ 0.67
CCDC78-216ENST00000544996 IGSF3O75054 1194 aa19.22■□□□□ 0.67
CCDC78-216ENST00000544996 CDAN1Q8IWY9 1227 aa19.22■□□□□ 0.67
CCDC78-216ENST00000544996 ANKRD13AQ8IZ07 590 aa19.22■□□□□ 0.67
CCDC78-216ENST00000544996 NSUN4Q96CB9 384 aaKnown RBP19.22■□□□□ 0.67
CCDC78-216ENST00000544996 BCL11AQ9H165 835 aa19.22■□□□□ 0.67
CCDC78-216ENST00000544996 GPR75-ASB3A0A0A6YYF3 556 aa19.21■□□□□ 0.67
CCDC78-216ENST00000544996 CYP2E1P05181 493 aaPredicted RBP19.21■□□□□ 0.67
CCDC78-216ENST00000544996 BTDP43251 543 aa19.21■□□□□ 0.67
CCDC78-216ENST00000544996 TCP10Q12799 353 aa19.21■□□□□ 0.67
CCDC78-216ENST00000544996 NFIAQ12857 509 aa19.21■□□□□ 0.67
CCDC78-216ENST00000544996 NOL10Q9BSC4 688 aaKnown RBP19.21■□□□□ 0.67
CCDC78-216ENST00000544996 PRDM10Q9NQV6 1147 aa19.21■□□□□ 0.67
CCDC78-216ENST00000544996 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.21■□□□□ 0.67
CCDC78-216ENST00000544996 RPAP1Q9BWH6 1393 aaPredicted RBP19.2■□□□□ 0.66
CCDC78-216ENST00000544996 ZAP70P43403 619 aa19.2■□□□□ 0.66
CCDC78-216ENST00000544996 LBX1P52954 281 aa19.2■□□□□ 0.66
CCDC78-216ENST00000544996 DCAF15Q66K64 600 aa19.2■□□□□ 0.66
CCDC78-216ENST00000544996 NAA16Q6N069 864 aaPredicted RBP19.2■□□□□ 0.66
CCDC78-216ENST00000544996 CSRNP1Q96S65 589 aa19.2■□□□□ 0.66
CCDC78-216ENST00000544996 IDI2Q9BXS1 227 aa19.2■□□□□ 0.66
CCDC78-216ENST00000544996 LRRCC1Q9C099 1032 aa19.2■□□□□ 0.66
CCDC78-216ENST00000544996 ENTPD3O75355 529 aa19.19■□□□□ 0.66
CCDC78-216ENST00000544996 MAP4K4O95819 1239 aaPredicted RBP19.19■□□□□ 0.66
CCDC78-216ENST00000544996 HSPA8P11142 646 aaKnown RBP19.19■□□□□ 0.66
CCDC78-216ENST00000544996 MKRN3Q13064 507 aaKnown RBP19.19■□□□□ 0.66
CCDC78-216ENST00000544996 COL13A1Q5TAT6 717 aaPredicted RBP19.19■□□□□ 0.66
CCDC78-216ENST00000544996 SPRYD7Q5W111 196 aa19.19■□□□□ 0.66
CCDC78-216ENST00000544996 ZNF384Q8TF68 577 aa19.19■□□□□ 0.66
CCDC78-216ENST00000544996 CLMNQ96JQ2 1002 aa19.19■□□□□ 0.66
CCDC78-216ENST00000544996 FAM198AQ9UFP1 575 aa19.19■□□□□ 0.66
CCDC78-216ENST00000544996 BAG3O95817 575 aa19.18■□□□□ 0.66
CCDC78-216ENST00000544996 RGS3P49796 1198 aa19.18■□□□□ 0.66
CCDC78-216ENST00000544996 MAP3K9P80192 1104 aa19.18■□□□□ 0.66
CCDC78-216ENST00000544996 SREBF2Q12772 1141 aa19.18■□□□□ 0.66
CCDC78-216ENST00000544996 SAGE1Q9NXZ1 904 aa19.18■□□□□ 0.66
CCDC78-216ENST00000544996 CSADQ9Y600 493 aa19.18■□□□□ 0.66
CCDC78-216ENST00000544996 IDH1O75874 414 aaKnown RBP19.17■□□□□ 0.66
CCDC78-216ENST00000544996 ZBTB48P10074 688 aaPredicted RBP19.17■□□□□ 0.66
CCDC78-216ENST00000544996 CRBNQ96SW2 442 aa19.17■□□□□ 0.66
CCDC78-216ENST00000544996 TSKSQ9UJT2 592 aa19.17■□□□□ 0.66
CCDC78-216ENST00000544996 WDHD1O75717 1129 aaPredicted RBP19.16■□□□□ 0.66
CCDC78-216ENST00000544996 PLCG2P16885 1265 aa19.16■□□□□ 0.66
CCDC78-216ENST00000544996 PICALMQ13492 652 aa19.16■□□□□ 0.66
CCDC78-216ENST00000544996 TTF1Q15361 905 aaPredicted RBP19.16■□□□□ 0.66
CCDC78-216ENST00000544996 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.16■□□□□ 0.66
CCDC78-216ENST00000544996 MIGA2Q7L4E1 593 aa19.16■□□□□ 0.66
CCDC78-216ENST00000544996 ZSCAN29Q8IWY8 852 aaPredicted RBP19.16■□□□□ 0.66
CCDC78-216ENST00000544996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.16■□□□□ 0.66
CCDC78-216ENST00000544996 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.16■□□□□ 0.66
CCDC78-216ENST00000544996 WNK4Q96J92 1243 aa19.16■□□□□ 0.66
CCDC78-216ENST00000544996 WRNIP1Q96S55 665 aa19.16■□□□□ 0.66
CCDC78-216ENST00000544996 ZNF341Q9BYN7 854 aa19.16■□□□□ 0.66
CCDC78-216ENST00000544996 DCTPP1Q9H773 170 aa19.16■□□□□ 0.66
CCDC78-216ENST00000544996 ELP3Q9H9T3 547 aa19.16■□□□□ 0.66
CCDC78-216ENST00000544996 PIH1D3Q9NQM4 214 aaKnown RBP19.16■□□□□ 0.66
CCDC78-216ENST00000544996 RNF186Q9NXI6 227 aa19.16■□□□□ 0.66
CCDC78-216ENST00000544996 MANSC4A6NHS7 340 aaPredicted RBP19.15■□□□□ 0.66
CCDC78-216ENST00000544996 TRPA1O75762 1119 aa19.15■□□□□ 0.66
CCDC78-216ENST00000544996 TM4SF4P48230 202 aa19.15■□□□□ 0.66
CCDC78-216ENST00000544996 INHBEP58166 350 aa19.15■□□□□ 0.66
CCDC78-216ENST00000544996 RHBDL3P58872 404 aa19.15■□□□□ 0.66
CCDC78-216ENST00000544996 MAP3K12Q12852 859 aa19.15■□□□□ 0.66
CCDC78-216ENST00000544996 VGLL4Q14135 290 aa19.15■□□□□ 0.66
CCDC78-216ENST00000544996 TMED8Q6PL24 325 aaPredicted RBP19.15■□□□□ 0.66
CCDC78-216ENST00000544996 ZFPM1Q8IX07 1006 aa19.15■□□□□ 0.66
CCDC78-216ENST00000544996 PCDHB15Q9Y5E8 787 aa19.15■□□□□ 0.66
CCDC78-216ENST00000544996 NPM3O75607 178 aaKnown RBP19.14■□□□□ 0.65
CCDC78-216ENST00000544996 AATFQ9NY61 560 aaKnown RBP eCLIP19.14■□□□□ 0.65
CCDC78-216ENST00000544996 NDUFB9Q9Y6M9 179 aa19.14■□□□□ 0.65
CCDC78-216ENST00000544996 MYH2Q9UKX2 1941 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms