RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 IFNL3Q8IZI9 196 aa18.37■□□□□ 0.53
SNRNP70-203ENST00000544278 FBXO18Q8NFZ0 1043 aa18.37■□□□□ 0.53
SNRNP70-203ENST00000544278 ZNF592Q92610 1267 aa18.37■□□□□ 0.53
SNRNP70-203ENST00000544278 LLPHQ9BRT6 129 aaKnown RBP18.37■□□□□ 0.53
SNRNP70-203ENST00000544278 SRP68Q9UHB9 627 aaKnown RBP18.37■□□□□ 0.53
SNRNP70-203ENST00000544278 LAMB4A4D0S4 1761 aa18.37■□□□□ 0.53
SNRNP70-203ENST00000544278 WDHD1O75717 1129 aaPredicted RBP18.37■□□□□ 0.53
SNRNP70-203ENST00000544278 DYNLL1P63167 89 aaKnown RBP18.37■□□□□ 0.53
SNRNP70-203ENST00000544278 DPCR1Q3MIW9 517 aa18.37■□□□□ 0.53
SNRNP70-203ENST00000544278 TFCP2L1Q9NZI6 479 aa18.37■□□□□ 0.53
SNRNP70-203ENST00000544278 PARP4Q9UKK3 1724 aaKnown RBP18.37■□□□□ 0.53
SNRNP70-203ENST00000544278 GOLGA8AA7E2F4 631 aa18.36■□□□□ 0.53
SNRNP70-203ENST00000544278 RANBP6O60518 1105 aaKnown RBP18.36■□□□□ 0.53
SNRNP70-203ENST00000544278 EIF5P55010 431 aaKnown RBP18.36■□□□□ 0.53
SNRNP70-203ENST00000544278 CHRNDQ07001 517 aa18.36■□□□□ 0.53
SNRNP70-203ENST00000544278 ERFEQ4G0M1 354 aa18.36■□□□□ 0.53
SNRNP70-203ENST00000544278 MYSM1Q5VVJ2 828 aa18.36■□□□□ 0.53
SNRNP70-203ENST00000544278 APOA5Q6Q788 366 aa18.36■□□□□ 0.53
SNRNP70-203ENST00000544278 ZNF396Q96N95 335 aaPredicted RBP18.36■□□□□ 0.53
SNRNP70-203ENST00000544278 PLA2G12BQ9BX93 195 aa18.36■□□□□ 0.53
SNRNP70-203ENST00000544278 CLIP2Q9UDT6 1046 aa18.36■□□□□ 0.53
SNRNP70-203ENST00000544278 ANGEL1Q9UNK9 670 aaKnown RBP18.36■□□□□ 0.53
SNRNP70-203ENST00000544278 LPIN2Q92539 896 aa18.36■□□□□ 0.53
SNRNP70-203ENST00000544278 IL6STP40189 918 aaPredicted RBP18.36■□□□□ 0.53
SNRNP70-203ENST00000544278 CHAF1AQ13111 956 aaPredicted RBP18.36■□□□□ 0.53
SNRNP70-203ENST00000544278 KRT40Q6A162 431 aa18.36■□□□□ 0.53
SNRNP70-203ENST00000544278 TRMT1Q9NXH9 659 aaKnown RBP18.36■□□□□ 0.53
SNRNP70-203ENST00000544278 RFX7Q2KHR2 1363 aa18.36■□□□□ 0.53
SNRNP70-203ENST00000544278 SLIT2O94813 1529 aa18.35■□□□□ 0.53
SNRNP70-203ENST00000544278 SHANK3Q9BYB0 1731 aa18.35■□□□□ 0.53
SNRNP70-203ENST00000544278 SLC5A1P13866 664 aa18.35■□□□□ 0.53
SNRNP70-203ENST00000544278 ZNF75DP51815 510 aa18.35■□□□□ 0.53
SNRNP70-203ENST00000544278 LINC00301Q8NCQ3 95 aa18.35■□□□□ 0.53
SNRNP70-203ENST00000544278 CACTINQ8WUQ7 758 aaKnown RBP18.35■□□□□ 0.53
SNRNP70-203ENST00000544278 SPTLC2O15270 562 aa18.35■□□□□ 0.53
SNRNP70-203ENST00000544278 CYP7A1P22680 504 aa18.35■□□□□ 0.53
SNRNP70-203ENST00000544278 LRRFIP1Q32MZ4 808 aaKnown RBP18.35■□□□□ 0.53
SNRNP70-203ENST00000544278 VPS37DQ86XT2 251 aa18.35■□□□□ 0.53
SNRNP70-203ENST00000544278 MROH7-TTC4A0A0A0MT08 1334 aa18.34■□□□□ 0.53
SNRNP70-203ENST00000544278 PDILTQ8N807 584 aa18.34■□□□□ 0.53
SNRNP70-203ENST00000544278 KIF3AQ9Y496 699 aa18.34■□□□□ 0.53
SNRNP70-203ENST00000544278 STRCQ7RTU9 1775 aa18.34■□□□□ 0.53
SNRNP70-203ENST00000544278 TCRBV5S4A2TA0A5A2 114 aa18.34■□□□□ 0.53
SNRNP70-203ENST00000544278 ZBTB43O43298 467 aa18.34■□□□□ 0.53
SNRNP70-203ENST00000544278 KIF23Q02241 960 aaPredicted RBP18.34■□□□□ 0.53
SNRNP70-203ENST00000544278 GRIN1Q05586 938 aa18.34■□□□□ 0.53
SNRNP70-203ENST00000544278 MRPS27Q92552 414 aaKnown RBP18.34■□□□□ 0.53
SNRNP70-203ENST00000544278 NWD2Q9ULI1 1742 aa18.34■□□□□ 0.53
SNRNP70-203ENST00000544278 GSG1L2A8MUP6 293 aa18.34■□□□□ 0.53
SNRNP70-203ENST00000544278 SH2B2O14492 632 aaPredicted RBP18.34■□□□□ 0.53
SNRNP70-203ENST00000544278 FOXN1O15353 648 aa18.34■□□□□ 0.53
SNRNP70-203ENST00000544278 CAMTA2O94983 1202 aa18.34■□□□□ 0.53
SNRNP70-203ENST00000544278 IGHMBP2P38935 993 aaKnown RBP18.34■□□□□ 0.53
SNRNP70-203ENST00000544278 GPR101Q96P66 508 aaPredicted RBP18.34■□□□□ 0.53
SNRNP70-203ENST00000544278 CDHR2Q9BYE9 1310 aa18.33■□□□□ 0.53
SNRNP70-203ENST00000544278 FAM160A1Q05DH4 1040 aa18.33■□□□□ 0.53
SNRNP70-203ENST00000544278 GOLGA8FQ08AF8 430 aa18.33■□□□□ 0.53
SNRNP70-203ENST00000544278 GOLGA8DPQ0D2H9 430 aa18.33■□□□□ 0.53
SNRNP70-203ENST00000544278 MAP3K12Q12852 859 aa18.33■□□□□ 0.53
SNRNP70-203ENST00000544278 ENGASEQ8NFI3 743 aa18.33■□□□□ 0.53
SNRNP70-203ENST00000544278 CELF1Q92879 486 aaKnown RBP18.33■□□□□ 0.53
SNRNP70-203ENST00000544278 C8orf37Q96NL8 207 aa18.33■□□□□ 0.53
SNRNP70-203ENST00000544278 TAF1P21675 1872 aa18.33■□□□□ 0.53
SNRNP70-203ENST00000544278 UTRNP46939 3433 aa18.33■□□□□ 0.52
SNRNP70-203ENST00000544278 FAM205CA6NFA0 338 aa18.33■□□□□ 0.52
SNRNP70-203ENST00000544278 BTBD18B2RXH4 712 aa18.33■□□□□ 0.52
SNRNP70-203ENST00000544278 NR5A1Q13285 461 aa18.33■□□□□ 0.52
SNRNP70-203ENST00000544278 NAA30Q147X3 362 aaPredicted RBP18.33■□□□□ 0.52
SNRNP70-203ENST00000544278 UBR2Q8IWV8 1755 aa18.33■□□□□ 0.52
SNRNP70-203ENST00000544278 USP27XA6NNY8 438 aa18.32■□□□□ 0.52
SNRNP70-203ENST00000544278 NPHP1O15259 732 aa18.32■□□□□ 0.52
SNRNP70-203ENST00000544278 IARSP41252 1262 aaKnown RBP18.32■□□□□ 0.52
SNRNP70-203ENST00000544278 IQCB1Q15051 598 aa18.32■□□□□ 0.52
SNRNP70-203ENST00000544278 AMIGO3Q86WK7 504 aa18.32■□□□□ 0.52
SNRNP70-203ENST00000544278 KIAA1524Q8TCG1 905 aa18.32■□□□□ 0.52
SNRNP70-203ENST00000544278 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.32■□□□□ 0.52
SNRNP70-203ENST00000544278 SLC12A7Q9Y666 1083 aa18.32■□□□□ 0.52
SNRNP70-203ENST00000544278 COL4A1P02462 1669 aa18.32■□□□□ 0.52
SNRNP70-203ENST00000544278 FGFR2P21802 821 aa18.32■□□□□ 0.52
SNRNP70-203ENST00000544278 LMOD1P29536 600 aaPredicted RBP18.32■□□□□ 0.52
SNRNP70-203ENST00000544278 LY9Q9HBG7 655 aa18.32■□□□□ 0.52
SNRNP70-203ENST00000544278 CCDC69A6NI79 296 aa18.31■□□□□ 0.52
SNRNP70-203ENST00000544278 ANO1Q5XXA6 986 aa18.31■□□□□ 0.52
SNRNP70-203ENST00000544278 IGDCC4Q8TDY8 1250 aa18.31■□□□□ 0.52
SNRNP70-203ENST00000544278 FAM217BQ9NTX9 383 aaPredicted RBP18.31■□□□□ 0.52
SNRNP70-203ENST00000544278 NMT2O60551 498 aa18.31■□□□□ 0.52
SNRNP70-203ENST00000544278 PFKFB1P16118 471 aa18.31■□□□□ 0.52
SNRNP70-203ENST00000544278 GRAMD1CQ8IYS0 662 aa18.31■□□□□ 0.52
SNRNP70-203ENST00000544278 FMR1NBQ8N0W7 255 aaPredicted RBP18.31■□□□□ 0.52
SNRNP70-203ENST00000544278 SPDYE4A6NLX3 237 aa18.3■□□□□ 0.52
SNRNP70-203ENST00000544278 SMC2O95347 1197 aa18.3■□□□□ 0.52
SNRNP70-203ENST00000544278 PNOCQ13519 176 aa18.3■□□□□ 0.52
SNRNP70-203ENST00000544278 ZRSR1Q15695 479 aaKnown RBP18.3■□□□□ 0.52
SNRNP70-203ENST00000544278 ZSCAN25Q6NSZ9 544 aa18.3■□□□□ 0.52
SNRNP70-203ENST00000544278 MFSD6Q6ZSS7 791 aa18.3■□□□□ 0.52
SNRNP70-203ENST00000544278 OXER1Q8TDS5 423 aa18.3■□□□□ 0.52
SNRNP70-203ENST00000544278 ITGB4P16144 1822 aa18.3■□□□□ 0.52
SNRNP70-203ENST00000544278 VGLL3A8MV65 326 aa18.3■□□□□ 0.52
SNRNP70-203ENST00000544278 ZNF202O95125 648 aa18.3■□□□□ 0.52
SNRNP70-203ENST00000544278 UBE3CQ15386 1083 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms