RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 NBPF6Q5VWK0 638 aa11.64□□□□□ -0.55
PCDH9-204ENST00000544246 NBPF4Q96M43 638 aa11.64□□□□□ -0.55
PCDH9-204ENST00000544246 NKTRP30414 1462 aaKnown RBP11.64□□□□□ -0.55
PCDH9-204ENST00000544246 CYP7A1P22680 504 aa11.64□□□□□ -0.55
PCDH9-204ENST00000544246 NECAB1Q8N987 351 aa11.64□□□□□ -0.55
PCDH9-204ENST00000544246 HAUS8Q9BT25 410 aa11.64□□□□□ -0.55
PCDH9-204ENST00000544246 HAUS2Q9NVX0 235 aa11.64□□□□□ -0.55
PCDH9-204ENST00000544246 TRIM75PA6NK02 468 aa11.64□□□□□ -0.55
PCDH9-204ENST00000544246 EPB41P11171 864 aaKnown RBP11.64□□□□□ -0.55
PCDH9-204ENST00000544246 INPP1P49441 399 aa11.64□□□□□ -0.55
PCDH9-204ENST00000544246 VWA3BQ502W6 1294 aa11.64□□□□□ -0.55
PCDH9-204ENST00000544246 TTC22Q5TAA0 569 aa11.64□□□□□ -0.55
PCDH9-204ENST00000544246 GSDMBQ8TAX9 411 aa11.64□□□□□ -0.55
PCDH9-204ENST00000544246 THUMPD2Q9BTF0 503 aaKnown RBP11.64□□□□□ -0.55
PCDH9-204ENST00000544246 ZBTB3Q9H5J0 574 aa11.64□□□□□ -0.55
PCDH9-204ENST00000544246 CCDC152Q4G0S7 254 aa11.64□□□□□ -0.55
PCDH9-204ENST00000544246 CROCCP2Q86T23 111 aa11.64□□□□□ -0.55
PCDH9-204ENST00000544246 SSH1Q8WYL5 1049 aa11.64□□□□□ -0.55
PCDH9-204ENST00000544246 ZBTB21Q9ULJ3 1066 aa11.64□□□□□ -0.55
PCDH9-204ENST00000544246 NUP153P49790 1475 aaKnown RBP11.64□□□□□ -0.55
PCDH9-204ENST00000544246 TNFAIP3P21580 790 aa11.63□□□□□ -0.55
PCDH9-204ENST00000544246 ZNF365Q70YC5 407 aa11.63□□□□□ -0.55
PCDH9-204ENST00000544246 VSIG1Q86XK7 387 aa11.63□□□□□ -0.55
PCDH9-204ENST00000544246 CNGA4Q8IV77 575 aa11.63□□□□□ -0.55
PCDH9-204ENST00000544246 RNF10Q8N5U6 811 aaKnown RBP11.63□□□□□ -0.55
PCDH9-204ENST00000544246 A6NNZ2 444 aa11.63□□□□□ -0.55
PCDH9-204ENST00000544246 CALML3P27482 149 aa11.63□□□□□ -0.55
PCDH9-204ENST00000544246 RARSP54136 660 aaKnown RBP11.63□□□□□ -0.55
PCDH9-204ENST00000544246 PPP2R3AQ06190 1150 aa11.63□□□□□ -0.55
PCDH9-204ENST00000544246 TUBB8Q3ZCM7 444 aa11.63□□□□□ -0.55
PCDH9-204ENST00000544246 UBL4BQ8N7F7 174 aa11.63□□□□□ -0.55
PCDH9-204ENST00000544246 UBE2Q2Q8WVN8 375 aa11.63□□□□□ -0.55
PCDH9-204ENST00000544246 ZBTB9Q96C00 473 aa11.63□□□□□ -0.55
PCDH9-204ENST00000544246 NAP1L4Q99733 375 aaKnown RBP11.63□□□□□ -0.55
PCDH9-204ENST00000544246 NEO1Q92859 1461 aa11.63□□□□□ -0.55
PCDH9-204ENST00000544246 NBPF8Q3BBV2 869 aa11.63□□□□□ -0.55
PCDH9-204ENST00000544246 PICALMQ13492 652 aa11.63□□□□□ -0.55
PCDH9-204ENST00000544246 LGSNQ5TDP6 509 aa11.63□□□□□ -0.55
PCDH9-204ENST00000544246 ZNF710Q8N1W2 664 aa11.63□□□□□ -0.55
PCDH9-204ENST00000544246 TMX3Q96JJ7 454 aa11.63□□□□□ -0.55
PCDH9-204ENST00000544246 FNBP1Q96RU3 617 aa11.63□□□□□ -0.55
PCDH9-204ENST00000544246 NDUFAB1O14561 156 aa11.62□□□□□ -0.55
PCDH9-204ENST00000544246 LMOD1P29536 600 aaPredicted RBP11.62□□□□□ -0.55
PCDH9-204ENST00000544246 PPP2R5CQ13362 524 aa11.62□□□□□ -0.55
PCDH9-204ENST00000544246 SPTLC2O15270 562 aa11.62□□□□□ -0.55
PCDH9-204ENST00000544246 SMIM24O75264 130 aa11.62□□□□□ -0.55
PCDH9-204ENST00000544246 C8orf74Q6P047 294 aa11.62□□□□□ -0.55
PCDH9-204ENST00000544246 USHBP1Q8N6Y0 703 aa11.62□□□□□ -0.55
PCDH9-204ENST00000544246 GBP5Q96PP8 586 aa11.62□□□□□ -0.55
PCDH9-204ENST00000544246 DACT1Q9NYF0 836 aa11.62□□□□□ -0.55
PCDH9-204ENST00000544246 KDM5BQ9UGL1 1544 aa11.62□□□□□ -0.55
PCDH9-204ENST00000544246 TIAM1Q13009 1591 aa11.62□□□□□ -0.55
PCDH9-204ENST00000544246 STX17P56962 302 aa11.62□□□□□ -0.55
PCDH9-204ENST00000544246 BIRC3Q13489 604 aa11.62□□□□□ -0.55
PCDH9-204ENST00000544246 Q6ZUG5 572 aa11.62□□□□□ -0.55
PCDH9-204ENST00000544246 MIER3Q7Z3K6 550 aa11.62□□□□□ -0.55
PCDH9-204ENST00000544246 NSMCE1Q8WV22 266 aa11.62□□□□□ -0.55
PCDH9-204ENST00000544246 NUDT16Q96DE0 195 aaKnown RBP11.62□□□□□ -0.55
PCDH9-204ENST00000544246 ZFYVE16Q7Z3T8 1539 aa11.62□□□□□ -0.55
PCDH9-204ENST00000544246 ARHGAP25P42331 645 aa11.62□□□□□ -0.55
PCDH9-204ENST00000544246 TNNI2P48788 182 aa11.62□□□□□ -0.55
PCDH9-204ENST00000544246 AKR1B15C9JRZ8 316 aaPredicted RBP11.61□□□□□ -0.55
PCDH9-204ENST00000544246 IRX4P78413 519 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 BMP2KLQ5H9B9 411 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 MAP3K21Q5TCX8 1036 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 PLCB1Q9NQ66 1216 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 PHF8Q9UPP1 1060 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 KRT3P12035 628 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 RFC4P35249 363 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 TUBB2AQ13885 445 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 CCDC125Q86Z20 511 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 IFT20Q8IY31 132 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 GTF3C6Q969F1 213 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 TUBB2BQ9BVA1 445 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 F13A1P00488 732 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 CLCN1P35523 988 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 SH3BGRP55822 239 aaPredicted RBP11.61□□□□□ -0.55
PCDH9-204ENST00000544246 KMT5BQ4FZB7 885 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 ZKSCAN5Q9Y2L8 839 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 GOLGA6CA6NDK9 693 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 GOLGA6DP0CG33 693 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 TYRO3Q06418 890 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 GRM1Q13255 1194 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 UTP14CQ5TAP6 766 aaKnown RBP11.61□□□□□ -0.55
PCDH9-204ENST00000544246 RUFY3Q7L099 469 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 KRT28Q7Z3Y7 464 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 PSPC1Q8WXF1 523 aaKnown RBP11.61□□□□□ -0.55
PCDH9-204ENST00000544246 DDX21Q9NR30 783 aaKnown RBP eCLIP11.61□□□□□ -0.55
PCDH9-204ENST00000544246 GOLGA6AQ9NYA3 693 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 IFNKQ9P0W0 207 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 PPP2R5DQ14738 602 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 ASIC2Q16515 512 aa11.61□□□□□ -0.55
PCDH9-204ENST00000544246 NAPGQ99747 312 aaPredicted RBP11.61□□□□□ -0.55
PCDH9-204ENST00000544246 SEPT8Q92599 483 aa11.6□□□□□ -0.55
PCDH9-204ENST00000544246 ZKSCAN3Q9BRR0 538 aa11.6□□□□□ -0.55
PCDH9-204ENST00000544246 PIK3R4Q99570 1358 aa11.6□□□□□ -0.55
PCDH9-204ENST00000544246 BACH1O14867 736 aa11.6□□□□□ -0.55
PCDH9-204ENST00000544246 PPP1R2P41236 205 aa11.6□□□□□ -0.55
PCDH9-204ENST00000544246 EVCP57679 992 aa11.6□□□□□ -0.55
PCDH9-204ENST00000544246 TRIM14Q14142 442 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms