RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 MRPL50Q8N5N7 158 aaKnown RBP25.06■■□□□ 1.6
LPCAT3-211ENST00000543794 ZNF341Q9BYN7 854 aa25.06■■□□□ 1.6
LPCAT3-211ENST00000543794 MYCP01106 439 aaPredicted RBP25.05■■□□□ 1.6
LPCAT3-211ENST00000543794 PUM3Q15397 648 aaKnown RBP25.05■■□□□ 1.6
LPCAT3-211ENST00000543794 RPAP1Q9BWH6 1393 aaPredicted RBP25.05■■□□□ 1.6
LPCAT3-211ENST00000543794 USP44Q9H0E7 712 aa25.04■■□□□ 1.6
LPCAT3-211ENST00000543794 INPP5BP32019 993 aa25.03■■□□□ 1.6
LPCAT3-211ENST00000543794 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.03■■□□□ 1.6
LPCAT3-211ENST00000543794 WDR66Q8TBY9 1149 aa25.03■■□□□ 1.6
LPCAT3-211ENST00000543794 FAM151AQ8WW52 585 aa25.03■■□□□ 1.6
LPCAT3-211ENST00000543794 ZNF112Q9UJU3 913 aa25.03■■□□□ 1.6
LPCAT3-211ENST00000543794 COLQQ9Y215 455 aaPredicted RBP25.03■■□□□ 1.6
LPCAT3-211ENST00000543794 ANKRD23Q86SG2 305 aa25.02■■□□□ 1.6
LPCAT3-211ENST00000543794 PTPRCP08575 1304 aa25.02■■□□□ 1.6
LPCAT3-211ENST00000543794 CTGFP29279 349 aa25.01■■□□□ 1.59
LPCAT3-211ENST00000543794 LPIN2Q92539 896 aa25.01■■□□□ 1.59
LPCAT3-211ENST00000543794 CPA4Q9UI42 421 aa25.01■■□□□ 1.59
LPCAT3-211ENST00000543794 KCNH4Q9UQ05 1017 aa25.01■■□□□ 1.59
LPCAT3-211ENST00000543794 EYA2O00167 538 aa25■■□□□ 1.59
LPCAT3-211ENST00000543794 PSMC4P43686 418 aa25■■□□□ 1.59
LPCAT3-211ENST00000543794 RFX5P48382 616 aaPredicted RBP25■■□□□ 1.59
LPCAT3-211ENST00000543794 FAM9BQ8IZU0 186 aa25■■□□□ 1.59
LPCAT3-211ENST00000543794 SRRDQ9UH36 339 aa25■■□□□ 1.59
LPCAT3-211ENST00000543794 ZNF521Q96K83 1311 aa25■■□□□ 1.59
LPCAT3-211ENST00000543794 H0YGN5 161 aa24.99■■□□□ 1.59
LPCAT3-211ENST00000543794 PDHXO00330 501 aa24.99■■□□□ 1.59
LPCAT3-211ENST00000543794 SLC5A1P13866 664 aa24.99■■□□□ 1.59
LPCAT3-211ENST00000543794 HOXD10P28358 340 aa24.99■■□□□ 1.59
LPCAT3-211ENST00000543794 CDC42EP5Q6NZY7 148 aa24.99■■□□□ 1.59
LPCAT3-211ENST00000543794 TRIM47Q96LD4 638 aa24.99■■□□□ 1.59
LPCAT3-211ENST00000543794 DAGLAQ9Y4D2 1042 aa24.99■■□□□ 1.59
LPCAT3-211ENST00000543794 ADGRA2Q96PE1 1338 aa24.98■■□□□ 1.59
LPCAT3-211ENST00000543794 TCP10Q12799 353 aa24.98■■□□□ 1.59
LPCAT3-211ENST00000543794 MOGSQ13724 837 aa24.98■■□□□ 1.59
LPCAT3-211ENST00000543794 MTFR1Q15390 333 aa24.98■■□□□ 1.59
LPCAT3-211ENST00000543794 NFIAQ12857 509 aa24.97■■□□□ 1.59
LPCAT3-211ENST00000543794 NOL9Q5SY16 702 aaKnown RBP24.97■■□□□ 1.59
LPCAT3-211ENST00000543794 ECM2O94769 699 aaPredicted RBP24.96■■□□□ 1.59
LPCAT3-211ENST00000543794 OSBPP22059 807 aa24.96■■□□□ 1.59
LPCAT3-211ENST00000543794 ZEB1P37275 1124 aaPredicted RBP24.96■■□□□ 1.59
LPCAT3-211ENST00000543794 DIXDC1Q155Q3 683 aa24.96■■□□□ 1.59
LPCAT3-211ENST00000543794 ATG9AQ7Z3C6 839 aa24.96■■□□□ 1.59
LPCAT3-211ENST00000543794 SSH1Q8WYL5 1049 aa24.96■■□□□ 1.59
LPCAT3-211ENST00000543794 SHISA4Q96DD7 197 aa24.96■■□□□ 1.59
LPCAT3-211ENST00000543794 FMNL1O95466 1100 aaPredicted RBP24.95■■□□□ 1.58
LPCAT3-211ENST00000543794 GRK4P32298 578 aa24.95■■□□□ 1.58
LPCAT3-211ENST00000543794 FAM198AQ9UFP1 575 aa24.95■■□□□ 1.58
LPCAT3-211ENST00000543794 ZSWIM8A7E2V4 1837 aa24.95■■□□□ 1.58
LPCAT3-211ENST00000543794 CXCL11O14625 94 aa24.94■■□□□ 1.58
LPCAT3-211ENST00000543794 PRDX5P30044 214 aa24.94■■□□□ 1.58
LPCAT3-211ENST00000543794 NKX2-3Q8TAU0 364 aa24.94■■□□□ 1.58
LPCAT3-211ENST00000543794 RAET1EQ8TD07 263 aa24.94■■□□□ 1.58
LPCAT3-211ENST00000543794 USP40Q9NVE5 1235 aa24.94■■□□□ 1.58
LPCAT3-211ENST00000543794 CEP290O15078 2479 aa24.93■■□□□ 1.58
LPCAT3-211ENST00000543794 GPAT2Q6NUI2 795 aa24.93■■□□□ 1.58
LPCAT3-211ENST00000543794 FBXO3Q9UK99 471 aa24.93■■□□□ 1.58
LPCAT3-211ENST00000543794 LDHBP07195 334 aaKnown RBP24.92■■□□□ 1.58
LPCAT3-211ENST00000543794 GJB1P08034 283 aa24.92■■□□□ 1.58
LPCAT3-211ENST00000543794 BCRP11274 1271 aa24.92■■□□□ 1.58
LPCAT3-211ENST00000543794 ZFPM1Q8IX07 1006 aa24.92■■□□□ 1.58
LPCAT3-211ENST00000543794 PARK7Q99497 189 aaKnown RBP24.92■■□□□ 1.58
LPCAT3-211ENST00000543794 GNL3LQ9NVN8 582 aaKnown RBP24.92■■□□□ 1.58
LPCAT3-211ENST00000543794 MYPNQ86TC9 1320 aa24.91■■□□□ 1.58
LPCAT3-211ENST00000543794 SALL1Q9NSC2 1324 aa24.91■■□□□ 1.58
LPCAT3-211ENST00000543794 GJA8P48165 433 aa24.91■■□□□ 1.58
LPCAT3-211ENST00000543794 UBE2Q1Q7Z7E8 422 aa24.91■■□□□ 1.58
LPCAT3-211ENST00000543794 PHF20L1A8MW92 1017 aa24.9■■□□□ 1.58
LPCAT3-211ENST00000543794 CIAO1O76071 339 aa24.9■■□□□ 1.58
LPCAT3-211ENST00000543794 ATP2B3Q16720 1220 aa24.9■■□□□ 1.58
LPCAT3-211ENST00000543794 DPF3Q92784 378 aa24.9■■□□□ 1.58
LPCAT3-211ENST00000543794 CEP126Q9P2H0 1117 aa24.9■■□□□ 1.58
LPCAT3-211ENST00000543794 DENND2AQ9ULE3 1009 aa24.9■■□□□ 1.58
LPCAT3-211ENST00000543794 E9PSI1 815 aa24.89■■□□□ 1.58
LPCAT3-211ENST00000543794 ZBTB22O15209 634 aa24.89■■□□□ 1.58
LPCAT3-211ENST00000543794 CYP2C8P10632 490 aa24.89■■□□□ 1.58
LPCAT3-211ENST00000543794 CCL5P13501 91 aa24.89■■□□□ 1.58
LPCAT3-211ENST00000543794 IDI2Q9BXS1 227 aa24.89■■□□□ 1.58
LPCAT3-211ENST00000543794 SZT2Q5T011 3432 aa24.89■■□□□ 1.57
LPCAT3-211ENST00000543794 TRIOBPQ9H2D6 2365 aa24.89■■□□□ 1.57
LPCAT3-211ENST00000543794 SEMA3EO15041 775 aa24.88■■□□□ 1.57
LPCAT3-211ENST00000543794 FCGRTP55899 365 aa24.88■■□□□ 1.57
LPCAT3-211ENST00000543794 PRKCZQ05513 592 aa24.88■■□□□ 1.57
LPCAT3-211ENST00000543794 CHRDL2Q6WN34 429 aa24.88■■□□□ 1.57
LPCAT3-211ENST00000543794 FASTKD5Q7L8L6 764 aaKnown RBP24.88■■□□□ 1.57
LPCAT3-211ENST00000543794 RNF208Q9H0X6 261 aa24.88■■□□□ 1.57
LPCAT3-211ENST00000543794 SIL1Q9H173 461 aa24.88■■□□□ 1.57
LPCAT3-211ENST00000543794 ZHX2Q9Y6X8 837 aa24.88■■□□□ 1.57
LPCAT3-211ENST00000543794 ATRNL1Q5VV63 1379 aa24.88■■□□□ 1.57
LPCAT3-211ENST00000543794 A0A0G2JLL6 359 aaPredicted RBP24.87■■□□□ 1.57
LPCAT3-211ENST00000543794 ENTPD3O75355 529 aa24.87■■□□□ 1.57
LPCAT3-211ENST00000543794 PHKA1P46020 1223 aa24.87■■□□□ 1.57
LPCAT3-211ENST00000543794 UBXN2AP68543 259 aa24.87■■□□□ 1.57
LPCAT3-211ENST00000543794 MAP3K10Q02779 954 aa24.87■■□□□ 1.57
LPCAT3-211ENST00000543794 ALDH1L2Q3SY69 923 aa24.87■■□□□ 1.57
LPCAT3-211ENST00000543794 PRRT2Q7Z6L0 340 aaPredicted RBP24.87■■□□□ 1.57
LPCAT3-211ENST00000543794 SCYL3Q8IZE3 742 aa24.87■■□□□ 1.57
LPCAT3-211ENST00000543794 BIN2Q9UBW5 565 aaPredicted RBP24.87■■□□□ 1.57
LPCAT3-211ENST00000543794 PTPRAP18433 802 aa24.86■■□□□ 1.57
LPCAT3-211ENST00000543794 RGS3P49796 1198 aa24.86■■□□□ 1.57
LPCAT3-211ENST00000543794 SLAIN1Q8ND83 568 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms