RNA–Protein interactions for RNA: ENST00000542277.5

PTPN6-216, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 664 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-216ENST00000542277 TRMT2AQ8IZ69 625 aaKnown RBP22.39■■□□□ 1.17
PTPN6-216ENST00000542277 ZNF333Q96JL9 665 aa22.39■■□□□ 1.17
PTPN6-216ENST00000542277 ZNF341Q9BYN7 854 aa22.39■■□□□ 1.17
PTPN6-216ENST00000542277 ARHGAP39Q9C0H5 1083 aa22.39■■□□□ 1.17
PTPN6-216ENST00000542277 SMC4Q9NTJ3 1288 aa22.39■■□□□ 1.17
PTPN6-216ENST00000542277 NOB1Q9ULX3 412 aaKnown RBP22.39■■□□□ 1.17
PTPN6-216ENST00000542277 DAGLAQ9Y4D2 1042 aa22.39■■□□□ 1.17
PTPN6-216ENST00000542277 ECM29Q5VYK3 1845 aa22.38■■□□□ 1.17
PTPN6-216ENST00000542277 NFIAQ12857 509 aa22.38■■□□□ 1.17
PTPN6-216ENST00000542277 PPIL2Q13356 520 aa22.38■■□□□ 1.17
PTPN6-216ENST00000542277 CEP126Q9P2H0 1117 aa22.38■■□□□ 1.17
PTPN6-216ENST00000542277 UBTFL1P0CB47 393 aaPredicted RBP22.37■■□□□ 1.17
PTPN6-216ENST00000542277 PRDX5P30044 214 aa22.37■■□□□ 1.17
PTPN6-216ENST00000542277 PPATQ06203 517 aa22.37■■□□□ 1.17
PTPN6-216ENST00000542277 ATP2B3Q16720 1220 aa22.37■■□□□ 1.17
PTPN6-216ENST00000542277 ZFPM1Q8IX07 1006 aa22.37■■□□□ 1.17
PTPN6-216ENST00000542277 TMEM106CQ9BVX2 250 aa22.37■■□□□ 1.17
PTPN6-216ENST00000542277 USP40Q9NVE5 1235 aa22.37■■□□□ 1.17
PTPN6-216ENST00000542277 ZNF112Q9UJU3 913 aa22.37■■□□□ 1.17
PTPN6-216ENST00000542277 WDHD1O75717 1129 aaPredicted RBP22.36■■□□□ 1.17
PTPN6-216ENST00000542277 ECM2O94769 699 aaPredicted RBP22.36■■□□□ 1.17
PTPN6-216ENST00000542277 NBPF11Q86T75 865 aa22.36■■□□□ 1.17
PTPN6-216ENST00000542277 ZCCHC17Q9NP64 241 aaKnown RBP22.36■■□□□ 1.17
PTPN6-216ENST00000542277 FAM198AQ9UFP1 575 aa22.36■■□□□ 1.17
PTPN6-216ENST00000542277 PA2G4Q9UQ80 394 aaKnown RBP22.36■■□□□ 1.17
PTPN6-216ENST00000542277 CIAO1O76071 339 aa22.35■■□□□ 1.17
PTPN6-216ENST00000542277 MYCP01106 439 aaPredicted RBP22.35■■□□□ 1.17
PTPN6-216ENST00000542277 LACTBP83111 547 aaPredicted RBP22.35■■□□□ 1.17
PTPN6-216ENST00000542277 SLC9C1Q4G0N8 1177 aa22.35■■□□□ 1.17
PTPN6-216ENST00000542277 C17orf99Q6UX52 265 aa22.35■■□□□ 1.17
PTPN6-216ENST00000542277 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.35■■□□□ 1.17
PTPN6-216ENST00000542277 FBXO3Q9UK99 471 aa22.35■■□□□ 1.17
PTPN6-216ENST00000542277 LDHBP07195 334 aaKnown RBP22.34■■□□□ 1.17
PTPN6-216ENST00000542277 PHKA1P46020 1223 aa22.34■■□□□ 1.17
PTPN6-216ENST00000542277 SH3TC2Q8TF17 1288 aa22.34■■□□□ 1.17
PTPN6-216ENST00000542277 GNL3LQ9NVN8 582 aaKnown RBP22.34■■□□□ 1.17
PTPN6-216ENST00000542277 BRCA2P51587 3418 aa22.34■■□□□ 1.17
PTPN6-216ENST00000542277 CTGFP29279 349 aa22.33■■□□□ 1.17
PTPN6-216ENST00000542277 ADORA1P30542 326 aa22.33■■□□□ 1.17
PTPN6-216ENST00000542277 IL15P40933 162 aaPredicted RBP22.33■■□□□ 1.17
PTPN6-216ENST00000542277 TIMM10P62072 90 aa22.33■■□□□ 1.17
PTPN6-216ENST00000542277 MOGSQ13724 837 aa22.33■■□□□ 1.17
PTPN6-216ENST00000542277 KIF22Q14807 665 aa22.33■■□□□ 1.17
PTPN6-216ENST00000542277 CPA4Q9UI42 421 aa22.33■■□□□ 1.17
PTPN6-216ENST00000542277 LRRFIP2Q9Y608 721 aaKnown RBP22.33■■□□□ 1.17
PTPN6-216ENST00000542277 PDHXO00330 501 aa22.32■■□□□ 1.16
PTPN6-216ENST00000542277 SLC4A8Q2Y0W8 1093 aa22.32■■□□□ 1.16
PTPN6-216ENST00000542277 KCNH4Q9UQ05 1017 aa22.32■■□□□ 1.16
PTPN6-216ENST00000542277 RPAP1Q9BWH6 1393 aaPredicted RBP22.31■■□□□ 1.16
PTPN6-216ENST00000542277 ANKRD23Q86SG2 305 aa22.31■■□□□ 1.16
PTPN6-216ENST00000542277 GCC1Q96CN9 775 aa22.31■■□□□ 1.16
PTPN6-216ENST00000542277 DENND2AQ9ULE3 1009 aa22.31■■□□□ 1.16
PTPN6-216ENST00000542277 HABP4Q5JVS0 413 aaKnown RBP22.3■■□□□ 1.16
PTPN6-216ENST00000542277 CCDC102BQ68D86 513 aa22.3■■□□□ 1.16
PTPN6-216ENST00000542277 API5Q9BZZ5 524 aaKnown RBP22.3■■□□□ 1.16
PTPN6-216ENST00000542277 COPRSQ9NQ92 184 aa22.3■■□□□ 1.16
PTPN6-216ENST00000542277 SALL1Q9NSC2 1324 aa22.3■■□□□ 1.16
PTPN6-216ENST00000542277 OTOFQ9HC10 1997 aa22.29■■□□□ 1.16
PTPN6-216ENST00000542277 PHF20L1A8MW92 1017 aa22.29■■□□□ 1.16
PTPN6-216ENST00000542277 SEMA3EO15041 775 aa22.29■■□□□ 1.16
PTPN6-216ENST00000542277 SLURP2P0DP57 97 aa22.29■■□□□ 1.16
PTPN6-216ENST00000542277 PSMC4P43686 418 aa22.29■■□□□ 1.16
PTPN6-216ENST00000542277 NOL9Q5SY16 702 aaKnown RBP22.29■■□□□ 1.16
PTPN6-216ENST00000542277 SH3BP5LQ7L8J4 393 aa22.29■■□□□ 1.16
PTPN6-216ENST00000542277 MEIS3Q99687 375 aa22.29■■□□□ 1.16
PTPN6-216ENST00000542277 GNRH1P01148 92 aa22.28■■□□□ 1.16
PTPN6-216ENST00000542277 RGS3P49796 1198 aa22.28■■□□□ 1.16
PTPN6-216ENST00000542277 GPAT2Q6NUI2 795 aa22.28■■□□□ 1.16
PTPN6-216ENST00000542277 TRIM47Q96LD4 638 aa22.28■■□□□ 1.16
PTPN6-216ENST00000542277 CXCL11O14625 94 aa22.27■■□□□ 1.16
PTPN6-216ENST00000542277 IDI2Q9BXS1 227 aa22.27■■□□□ 1.16
PTPN6-216ENST00000542277 HDAC5Q9UQL6 1122 aa22.27■■□□□ 1.16
PTPN6-216ENST00000542277 LAMB1P07942 1786 aa22.27■■□□□ 1.16
PTPN6-216ENST00000542277 ZBTB22O15209 634 aa22.26■■□□□ 1.15
PTPN6-216ENST00000542277 FMNL1O95466 1100 aaPredicted RBP22.26■■□□□ 1.15
PTPN6-216ENST00000542277 CT47B1P0C2W7 299 aaPredicted RBP22.26■■□□□ 1.15
PTPN6-216ENST00000542277 PRMT2P55345 433 aa22.26■■□□□ 1.15
PTPN6-216ENST00000542277 RASGRF1Q13972 1273 aa22.26■■□□□ 1.15
PTPN6-216ENST00000542277 ABCF2Q9UG63 623 aa22.26■■□□□ 1.15
PTPN6-216ENST00000542277 SRRDQ9UH36 339 aa22.26■■□□□ 1.15
PTPN6-216ENST00000542277 ZHX2Q9Y6X8 837 aa22.26■■□□□ 1.15
PTPN6-216ENST00000542277 ENTPD3O75355 529 aa22.25■■□□□ 1.15
PTPN6-216ENST00000542277 CYP2C8P10632 490 aa22.25■■□□□ 1.15
PTPN6-216ENST00000542277 OSBPP22059 807 aa22.25■■□□□ 1.15
PTPN6-216ENST00000542277 RARSP54136 660 aaKnown RBP22.25■■□□□ 1.15
PTPN6-216ENST00000542277 MAP3K10Q02779 954 aa22.25■■□□□ 1.15
PTPN6-216ENST00000542277 TFCP2Q12800 502 aa22.25■■□□□ 1.15
PTPN6-216ENST00000542277 MTFR1Q15390 333 aa22.25■■□□□ 1.15
PTPN6-216ENST00000542277 FAM163AQ96GL9 167 aaPredicted RBP22.25■■□□□ 1.15
PTPN6-216ENST00000542277 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.25■■□□□ 1.15
PTPN6-216ENST00000542277 ARAP2Q8WZ64 1704 aa22.25■■□□□ 1.15
PTPN6-216ENST00000542277 ADGRA2Q96PE1 1338 aa22.25■■□□□ 1.15
PTPN6-216ENST00000542277 DDTLA6NHG4 134 aaPredicted RBP22.24■■□□□ 1.15
PTPN6-216ENST00000542277 XAGE2Q96GT9 111 aa22.24■■□□□ 1.15
PTPN6-216ENST00000542277 DDX4Q9NQI0 724 aaKnown RBP22.24■■□□□ 1.15
PTPN6-216ENST00000542277 GAKO14976 1311 aa22.24■■□□□ 1.15
PTPN6-216ENST00000542277 CEP290O15078 2479 aa22.23■■□□□ 1.15
PTPN6-216ENST00000542277 PTPRAP18433 802 aa22.23■■□□□ 1.15
PTPN6-216ENST00000542277 HOXD10P28358 340 aa22.23■■□□□ 1.15
PTPN6-216ENST00000542277 ZSCAN29Q8IWY8 852 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms