RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 TMEM87AQ8NBN3 555 aa7.57□□□□□ -1.2
CPSF7-220ENST00000541963 EPS8L3Q8TE67 593 aaKnown RBP7.57□□□□□ -1.2
CPSF7-220ENST00000541963 ORAI2Q96SN7 254 aa7.57□□□□□ -1.2
CPSF7-220ENST00000541963 TLR7Q9NYK1 1049 aaKnown RBP7.57□□□□□ -1.2
CPSF7-220ENST00000541963 KNDC1Q76NI1 1749 aa7.57□□□□□ -1.2
CPSF7-220ENST00000541963 NPHP3Q7Z494 1330 aa7.56□□□□□ -1.2
CPSF7-220ENST00000541963 NALCNQ8IZF0 1738 aa7.56□□□□□ -1.2
CPSF7-220ENST00000541963 GPR25O00155 361 aa7.56□□□□□ -1.2
CPSF7-220ENST00000541963 NANOS1Q8WY41 292 aaKnown RBP7.56□□□□□ -1.2
CPSF7-220ENST00000541963 SLC30A3Q99726 388 aa7.56□□□□□ -1.2
CPSF7-220ENST00000541963 BACH2Q9BYV9 841 aa7.56□□□□□ -1.2
CPSF7-220ENST00000541963 SRCIN1Q9C0H9 1055 aa7.56□□□□□ -1.2
CPSF7-220ENST00000541963 IGFLR1Q9H665 355 aa7.56□□□□□ -1.2
CPSF7-220ENST00000541963 ASXL1Q8IXJ9 1541 aa7.56□□□□□ -1.2
CPSF7-220ENST00000541963 DLC1Q96QB1 1528 aa7.56□□□□□ -1.2
CPSF7-220ENST00000541963 EIF3AQ14152 1382 aaKnown RBP7.56□□□□□ -1.2
CPSF7-220ENST00000541963 PLEKHH1Q9ULM0 1364 aa7.56□□□□□ -1.2
CPSF7-220ENST00000541963 AHDC1Q5TGY3 1603 aaPredicted RBP7.56□□□□□ -1.2
CPSF7-220ENST00000541963 MED1Q15648 1581 aaPredicted RBP7.55□□□□□ -1.2
CPSF7-220ENST00000541963 SCAMP3O14828 347 aaKnown RBP7.55□□□□□ -1.2
CPSF7-220ENST00000541963 MX2P20592 715 aa7.55□□□□□ -1.2
CPSF7-220ENST00000541963 SOX18P35713 384 aa7.55□□□□□ -1.2
CPSF7-220ENST00000541963 MRPL58Q14197 206 aaKnown RBP7.55□□□□□ -1.2
CPSF7-220ENST00000541963 DHX32Q7L7V1 743 aaKnown RBP7.55□□□□□ -1.2
CPSF7-220ENST00000541963 RAB44Q7Z6P3 723 aaPredicted RBP7.55□□□□□ -1.2
CPSF7-220ENST00000541963 RBSNQ9H1K0 784 aa7.55□□□□□ -1.2
CPSF7-220ENST00000541963 EHD4Q9H223 541 aa7.55□□□□□ -1.2
CPSF7-220ENST00000541963 CHRDQ9H2X0 955 aa7.55□□□□□ -1.2
CPSF7-220ENST00000541963 NPHS2Q9NP85 383 aa7.55□□□□□ -1.2
CPSF7-220ENST00000541963 ZFATQ9P243 1243 aa7.55□□□□□ -1.2
CPSF7-220ENST00000541963 KANSL3Q9P2N6 904 aa7.55□□□□□ -1.2
CPSF7-220ENST00000541963 CDC42BPGQ6DT37 1551 aa7.54□□□□□ -1.2
CPSF7-220ENST00000541963 CTBSQ01459 385 aa7.54□□□□□ -1.2
CPSF7-220ENST00000541963 TBC1D8BQ0IIM8 1120 aa7.54□□□□□ -1.2
CPSF7-220ENST00000541963 SUV39H2Q9H5I1 410 aa7.54□□□□□ -1.2
CPSF7-220ENST00000541963 C12orf49Q9H741 205 aa7.54□□□□□ -1.2
CPSF7-220ENST00000541963 NXF1Q9UBU9 619 aaKnown RBP7.54□□□□□ -1.2
CPSF7-220ENST00000541963 TONSLQ96HA7 1378 aa7.54□□□□□ -1.2
CPSF7-220ENST00000541963 COL16A1Q07092 1604 aaPredicted RBP7.53□□□□□ -1.2
CPSF7-220ENST00000541963 KIAA1210Q9ULL0 1709 aa7.53□□□□□ -1.2
CPSF7-220ENST00000541963 RECKO95980 971 aa7.53□□□□□ -1.2
CPSF7-220ENST00000541963 GHRHP01286 108 aa7.53□□□□□ -1.2
CPSF7-220ENST00000541963 CYP2E1P05181 493 aaPredicted RBP7.53□□□□□ -1.2
CPSF7-220ENST00000541963 IRS1P35568 1242 aa7.53□□□□□ -1.2
CPSF7-220ENST00000541963 NRLP54845 237 aa7.53□□□□□ -1.2
CPSF7-220ENST00000541963 GRIN2CQ14957 1233 aa7.53□□□□□ -1.2
CPSF7-220ENST00000541963 KIAA0319Q5VV43 1072 aa7.53□□□□□ -1.2
CPSF7-220ENST00000541963 KRT28Q7Z3Y7 464 aa7.53□□□□□ -1.2
CPSF7-220ENST00000541963 NPAS3Q8IXF0 933 aa7.53□□□□□ -1.2
CPSF7-220ENST00000541963 DDX17Q92841 729 aaKnown RBP7.53□□□□□ -1.2
CPSF7-220ENST00000541963 BCO2Q9BYV7 579 aa7.53□□□□□ -1.2
CPSF7-220ENST00000541963 UBE2OQ9C0C9 1292 aaKnown RBP7.53□□□□□ -1.2
CPSF7-220ENST00000541963 RNF19AQ9NV58 838 aa7.53□□□□□ -1.2
CPSF7-220ENST00000541963 FAM8A1Q9UBU6 413 aa7.53□□□□□ -1.2
CPSF7-220ENST00000541963 SALL4Q9UJQ4 1053 aa7.53□□□□□ -1.2
CPSF7-220ENST00000541963 ADGRB1O14514 1584 aa7.53□□□□□ -1.2
CPSF7-220ENST00000541963 NHSL1Q5SYE7 1610 aa7.52□□□□□ -1.2
CPSF7-220ENST00000541963 MAP2K3P46734 347 aa7.52□□□□□ -1.21
CPSF7-220ENST00000541963 ZNF772Q68DY9 489 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-220ENST00000541963 PI16Q6UXB8 463 aa7.52□□□□□ -1.21
CPSF7-220ENST00000541963 ILDR2Q71H61 639 aa7.52□□□□□ -1.21
CPSF7-220ENST00000541963 SYT9Q86SS6 491 aa7.52□□□□□ -1.21
CPSF7-220ENST00000541963 SLC16A10Q8TF71 515 aa7.52□□□□□ -1.21
CPSF7-220ENST00000541963 CRELD1Q96HD1 420 aa7.52□□□□□ -1.21
CPSF7-220ENST00000541963 HIRIP3Q9BW71 556 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-220ENST00000541963 PCGF6Q9BYE7 350 aa7.52□□□□□ -1.21
CPSF7-220ENST00000541963 ZFYVE1Q9HBF4 777 aa7.52□□□□□ -1.21
CPSF7-220ENST00000541963 SHPRHQ149N8 1683 aa7.51□□□□□ -1.21
CPSF7-220ENST00000541963 LOC102724428A0A0B4J2F2 783 aa7.51□□□□□ -1.21
CPSF7-220ENST00000541963 GSTT1P30711 240 aa7.51□□□□□ -1.21
CPSF7-220ENST00000541963 SIK1P57059 783 aa7.51□□□□□ -1.21
CPSF7-220ENST00000541963 ZNF468Q5VIY5 522 aaPredicted RBP7.51□□□□□ -1.21
CPSF7-220ENST00000541963 NXPE4Q6UWF7 544 aa7.51□□□□□ -1.21
CPSF7-220ENST00000541963 MICALL1Q8N3F8 863 aa7.51□□□□□ -1.21
CPSF7-220ENST00000541963 NGDNQ8NEJ9 315 aaKnown RBP7.51□□□□□ -1.21
CPSF7-220ENST00000541963 NSUN5Q96P11 429 aaKnown RBP7.51□□□□□ -1.21
CPSF7-220ENST00000541963 OSMRQ99650 979 aa7.51□□□□□ -1.21
CPSF7-220ENST00000541963 CDK19Q9BWU1 502 aa7.51□□□□□ -1.21
CPSF7-220ENST00000541963 AVENQ9NQS1 362 aaPredicted RBP7.51□□□□□ -1.21
CPSF7-220ENST00000541963 FMN2Q9NZ56 1722 aa7.51□□□□□ -1.21
CPSF7-220ENST00000541963 ANKARQ7Z5J8 1434 aa7.51□□□□□ -1.21
CPSF7-220ENST00000541963 CENPJQ9HC77 1338 aaPredicted RBP7.51□□□□□ -1.21
CPSF7-220ENST00000541963 ROCK2O75116 1388 aaKnown RBP7.5□□□□□ -1.21
CPSF7-220ENST00000541963 GPRASP1Q5JY77 1395 aa7.5□□□□□ -1.21
CPSF7-220ENST00000541963 PNPLA6Q8IY17 1366 aa7.5□□□□□ -1.21
CPSF7-220ENST00000541963 A0A1W2PP55 124 aa7.5□□□□□ -1.21
CPSF7-220ENST00000541963 POTECB2RU33 542 aa7.5□□□□□ -1.21
CPSF7-220ENST00000541963 SIN3BO75182 1162 aa7.5□□□□□ -1.21
CPSF7-220ENST00000541963 HOXD8P13378 290 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-220ENST00000541963 ADH6P28332 368 aa7.5□□□□□ -1.21
CPSF7-220ENST00000541963 ZNF76P36508 570 aa7.5□□□□□ -1.21
CPSF7-220ENST00000541963 VEGFBP49765 207 aa7.5□□□□□ -1.21
CPSF7-220ENST00000541963 GPLD1P80108 840 aa7.5□□□□□ -1.21
CPSF7-220ENST00000541963 PMFBP1Q8TBY8 1022 aa7.5□□□□□ -1.21
CPSF7-220ENST00000541963 TRPM4Q8TD43 1214 aa7.5□□□□□ -1.21
CPSF7-220ENST00000541963 RNF34Q969K3 372 aa7.5□□□□□ -1.21
CPSF7-220ENST00000541963 OSBPL7Q9BZF2 842 aa7.5□□□□□ -1.21
CPSF7-220ENST00000541963 LIN7BQ9HAP6 207 aa7.5□□□□□ -1.21
CPSF7-220ENST00000541963 METTL5Q9NRN9 209 aaKnown RBP7.5□□□□□ -1.21
CPSF7-220ENST00000541963 KIF1AQ12756 1690 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms