RNA–Protein interactions for RNA: ENST00000541948.2

NECAP1-205, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-205ENST00000541948 PPP2R3BQ9Y5P8 575 aa9.54□□□□□ -0.88
NECAP1-205ENST00000541948 CDK5RAP2Q96SN8 1893 aa9.53□□□□□ -0.88
NECAP1-205ENST00000541948 ATRNL1Q5VV63 1379 aa9.53□□□□□ -0.88
NECAP1-205ENST00000541948 MYO1BO43795 1136 aa9.53□□□□□ -0.88
NECAP1-205ENST00000541948 FRAT2O75474 233 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-205ENST00000541948 TM4SF4P48230 202 aa9.53□□□□□ -0.88
NECAP1-205ENST00000541948 INHBEP58166 350 aa9.53□□□□□ -0.88
NECAP1-205ENST00000541948 CEP85Q6P2H3 762 aa9.53□□□□□ -0.88
NECAP1-205ENST00000541948 ITPRIPQ8IWB1 547 aa9.53□□□□□ -0.88
NECAP1-205ENST00000541948 WDR66Q8TBY9 1149 aa9.53□□□□□ -0.88
NECAP1-205ENST00000541948 WNK4Q96J92 1243 aa9.53□□□□□ -0.88
NECAP1-205ENST00000541948 PTPN18Q99952 460 aa9.53□□□□□ -0.88
NECAP1-205ENST00000541948 DBNDD2Q9BQY9 259 aa9.53□□□□□ -0.88
NECAP1-205ENST00000541948 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-205ENST00000541948 NOP58Q9Y2X3 529 aaKnown RBP9.53□□□□□ -0.88
NECAP1-205ENST00000541948 SUGT1Q9Y2Z0 365 aa9.53□□□□□ -0.88
NECAP1-205ENST00000541948 SIPA1L1O43166 1804 aa9.53□□□□□ -0.88
NECAP1-205ENST00000541948 GAKO14976 1311 aa9.53□□□□□ -0.88
NECAP1-205ENST00000541948 DOCK2Q92608 1830 aa9.52□□□□□ -0.89
NECAP1-205ENST00000541948 IGF2BP3O00425 579 aaKnown RBP eCLIP9.52□□□□□ -0.89
NECAP1-205ENST00000541948 TBC1D8O95759 1140 aa9.52□□□□□ -0.89
NECAP1-205ENST00000541948 ARID4AP29374 1257 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-205ENST00000541948 MCAMP43121 646 aa9.52□□□□□ -0.89
NECAP1-205ENST00000541948 MLLT1Q03111 559 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-205ENST00000541948 SH3BP5LQ7L8J4 393 aa9.52□□□□□ -0.89
NECAP1-205ENST00000541948 ARMC9Q7Z3E5 817 aa9.52□□□□□ -0.89
NECAP1-205ENST00000541948 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.52□□□□□ -0.89
NECAP1-205ENST00000541948 EAF2Q96CJ1 260 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-205ENST00000541948 DENND2AQ9ULE3 1009 aa9.52□□□□□ -0.89
NECAP1-205ENST00000541948 MAST2Q6P0Q8 1798 aa9.52□□□□□ -0.89
NECAP1-205ENST00000541948 PDS5AQ29RF7 1337 aaKnown RBP9.52□□□□□ -0.89
NECAP1-205ENST00000541948 ZSWIM8A7E2V4 1837 aa9.52□□□□□ -0.89
NECAP1-205ENST00000541948 SEMA3EO15041 775 aa9.51□□□□□ -0.89
NECAP1-205ENST00000541948 ALDH1A1P00352 501 aa9.51□□□□□ -0.89
NECAP1-205ENST00000541948 SREBF2Q12772 1141 aa9.51□□□□□ -0.89
NECAP1-205ENST00000541948 TCP10Q12799 353 aa9.51□□□□□ -0.89
NECAP1-205ENST00000541948 VGLL4Q14135 290 aa9.51□□□□□ -0.89
NECAP1-205ENST00000541948 TNNI3KQ59H18 835 aa9.51□□□□□ -0.89
NECAP1-205ENST00000541948 FAM83AQ86UY5 434 aa9.51□□□□□ -0.89
NECAP1-205ENST00000541948 MS4A4AQ96JQ5 239 aa9.51□□□□□ -0.89
NECAP1-205ENST00000541948 NEUROD6Q96NK8 337 aa9.51□□□□□ -0.89
NECAP1-205ENST00000541948 MCOLN1Q9GZU1 580 aa9.51□□□□□ -0.89
NECAP1-205ENST00000541948 ELP3Q9H9T3 547 aa9.51□□□□□ -0.89
NECAP1-205ENST00000541948 DDX4Q9NQI0 724 aaKnown RBP9.51□□□□□ -0.89
NECAP1-205ENST00000541948 DBNLQ9UJU6 430 aaKnown RBP9.51□□□□□ -0.89
NECAP1-205ENST00000541948 HDAC5Q9UQL6 1122 aa9.51□□□□□ -0.89
NECAP1-205ENST00000541948 COG6Q9Y2V7 657 aa9.51□□□□□ -0.89
NECAP1-205ENST00000541948 SNCAIPQ9Y6H5 919 aa9.51□□□□□ -0.89
NECAP1-205ENST00000541948 FPGT-TNNI3KV9GXZ4 949 aa9.51□□□□□ -0.89
NECAP1-205ENST00000541948 RPAP1Q9BWH6 1393 aaPredicted RBP9.5□□□□□ -0.89
NECAP1-205ENST00000541948 PHIPQ8WWQ0 1821 aa9.5□□□□□ -0.89
NECAP1-205ENST00000541948 SURF6O75683 361 aaKnown RBP9.5□□□□□ -0.89
NECAP1-205ENST00000541948 WDHD1O75717 1129 aaPredicted RBP9.5□□□□□ -0.89
NECAP1-205ENST00000541948 LDHBP07195 334 aaKnown RBP9.5□□□□□ -0.89
NECAP1-205ENST00000541948 INPP5BP32019 993 aa9.5□□□□□ -0.89
NECAP1-205ENST00000541948 RHBDL3P58872 404 aa9.5□□□□□ -0.89
NECAP1-205ENST00000541948 MECOMQ03112 1051 aa9.5□□□□□ -0.89
NECAP1-205ENST00000541948 SUPT20HL1Q3ZLR7 823 aa9.5□□□□□ -0.89
NECAP1-205ENST00000541948 FKBP1CQ5VVH2 108 aa9.5□□□□□ -0.89
NECAP1-205ENST00000541948 MIGA2Q7L4E1 593 aa9.5□□□□□ -0.89
NECAP1-205ENST00000541948 ADGRA1Q86SQ6 560 aa9.5□□□□□ -0.89
NECAP1-205ENST00000541948 FTSJ3Q8IY81 847 aaKnown RBP9.5□□□□□ -0.89
NECAP1-205ENST00000541948 ANKRD13AQ8IZ07 590 aa9.5□□□□□ -0.89
NECAP1-205ENST00000541948 SPATA5Q8NB90 893 aa9.5□□□□□ -0.89
NECAP1-205ENST00000541948 ZKSCAN4Q969J2 545 aaPredicted RBP9.5□□□□□ -0.89
NECAP1-205ENST00000541948 CFHR5Q9BXR6 569 aa9.5□□□□□ -0.89
NECAP1-205ENST00000541948 SNRKQ9NRH2 765 aa9.5□□□□□ -0.89
NECAP1-205ENST00000541948 ZBTB40Q9NUA8 1239 aa9.5□□□□□ -0.89
NECAP1-205ENST00000541948 RCAN3Q9UKA8 241 aa9.5□□□□□ -0.89
NECAP1-205ENST00000541948 EXOC6BQ9Y2D4 811 aa9.5□□□□□ -0.89
NECAP1-205ENST00000541948 NDUFB9Q9Y6M9 179 aa9.5□□□□□ -0.89
NECAP1-205ENST00000541948 MAST3O60307 1309 aa9.5□□□□□ -0.89
NECAP1-205ENST00000541948 FOCADQ5VW36 1801 aa9.49□□□□□ -0.89
NECAP1-205ENST00000541948 TESPA1A2RU30 521 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-205ENST00000541948 DDTLA6NHG4 134 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-205ENST00000541948 CCDC85CA6NKD9 419 aa9.49□□□□□ -0.89
NECAP1-205ENST00000541948 PPP1R12BO60237 982 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-205ENST00000541948 CYP2E1P05181 493 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-205ENST00000541948 G3BP1Q13283 466 aaKnown RBP eCLIP9.49□□□□□ -0.89
NECAP1-205ENST00000541948 DGKZQ13574 1117 aa9.49□□□□□ -0.89
NECAP1-205ENST00000541948 TNFAIP1Q13829 316 aa9.49□□□□□ -0.89
NECAP1-205ENST00000541948 MVPQ14764 893 aaKnown RBP9.49□□□□□ -0.89
NECAP1-205ENST00000541948 IFNL1Q8IU54 200 aa9.49□□□□□ -0.89
NECAP1-205ENST00000541948 PIP4P2Q8N4L2 257 aa9.49□□□□□ -0.89
NECAP1-205ENST00000541948 ZNF296Q8WUU4 475 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-205ENST00000541948 NSUN4Q96CB9 384 aaKnown RBP9.49□□□□□ -0.89
NECAP1-205ENST00000541948 OPTNQ96CV9 577 aa9.49□□□□□ -0.89
NECAP1-205ENST00000541948 SLC10A4Q96EP9 437 aa9.49□□□□□ -0.89
NECAP1-205ENST00000541948 FAM163AQ96GL9 167 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-205ENST00000541948 CCDC8Q9H0W5 538 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-205ENST00000541948 GPR108Q9NPR9 543 aa9.49□□□□□ -0.89
NECAP1-205ENST00000541948 PIH1D3Q9NQM4 214 aaKnown RBP9.49□□□□□ -0.89
NECAP1-205ENST00000541948 USP40Q9NVE5 1235 aa9.49□□□□□ -0.89
NECAP1-205ENST00000541948 GNL3LQ9NVN8 582 aaKnown RBP9.49□□□□□ -0.89
NECAP1-205ENST00000541948 ABCF2Q9UG63 623 aa9.49□□□□□ -0.89
NECAP1-205ENST00000541948 AKAP2Q9Y2D5 859 aa9.49□□□□□ -0.89
NECAP1-205ENST00000541948 PDE4DIPQ5VU43 2346 aa9.49□□□□□ -0.89
NECAP1-205ENST00000541948 GPR75-ASB3A0A0A6YYF3 556 aa9.48□□□□□ -0.89
NECAP1-205ENST00000541948 ZBTB48P10074 688 aaPredicted RBP9.48□□□□□ -0.89
NECAP1-205ENST00000541948 BTDP43251 543 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms