RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 GIGYF2Q6Y7W6 1299 aaKnown RBP17.41■□□□□ 0.38
VARS2-211ENST00000541562 MB21D2Q8IYB1 491 aaPredicted RBP17.41■□□□□ 0.38
VARS2-211ENST00000541562 ZSWIM4Q9H7M6 989 aa17.41■□□□□ 0.38
VARS2-211ENST00000541562 RIPOR2Q9Y4F9 1068 aa17.41■□□□□ 0.38
VARS2-211ENST00000541562 SYKP43405 635 aa17.41■□□□□ 0.38
VARS2-211ENST00000541562 OXER1Q8TDS5 423 aa17.41■□□□□ 0.38
VARS2-211ENST00000541562 EPC1Q9H2F5 836 aa17.41■□□□□ 0.38
VARS2-211ENST00000541562 ANO10Q9NW15 660 aa17.41■□□□□ 0.38
VARS2-211ENST00000541562 TMEM232C9JQI7 657 aa17.41■□□□□ 0.38
VARS2-211ENST00000541562 PTF1AQ7RTS3 328 aa17.41■□□□□ 0.38
VARS2-211ENST00000541562 SMYD4Q8IYR2 804 aaPredicted RBP17.41■□□□□ 0.38
VARS2-211ENST00000541562 NMT2O60551 498 aa17.4■□□□□ 0.38
VARS2-211ENST00000541562 PDE8BO95263 885 aa17.4■□□□□ 0.38
VARS2-211ENST00000541562 CDC25AP30304 524 aa17.4■□□□□ 0.38
VARS2-211ENST00000541562 LRRC8AQ8IWT6 810 aa17.4■□□□□ 0.38
VARS2-211ENST00000541562 LRRN4CLQ8ND94 238 aa17.4■□□□□ 0.38
VARS2-211ENST00000541562 CCDC112Q8NEF3 446 aa17.4■□□□□ 0.38
VARS2-211ENST00000541562 CEP135Q66GS9 1140 aa17.4■□□□□ 0.38
VARS2-211ENST00000541562 GPR101Q96P66 508 aaPredicted RBP17.4■□□□□ 0.38
VARS2-211ENST00000541562 PLIN2Q99541 437 aa17.4■□□□□ 0.38
VARS2-211ENST00000541562 ANGEL1Q9UNK9 670 aaKnown RBP17.4■□□□□ 0.38
VARS2-211ENST00000541562 CYP7A1P22680 504 aa17.4■□□□□ 0.38
VARS2-211ENST00000541562 APOA5Q6Q788 366 aa17.4■□□□□ 0.38
VARS2-211ENST00000541562 MAPK8IP1Q9UQF2 711 aa17.4■□□□□ 0.38
VARS2-211ENST00000541562 MAP3K15Q6ZN16 1313 aa17.4■□□□□ 0.38
VARS2-211ENST00000541562 TNS3Q68CZ2 1445 aa17.39■□□□□ 0.38
VARS2-211ENST00000541562 PCCAP05165 728 aaPredicted RBP17.39■□□□□ 0.37
VARS2-211ENST00000541562 CDK11BP21127 795 aaKnown RBP17.39■□□□□ 0.37
VARS2-211ENST00000541562 ADD2P35612 726 aa17.39■□□□□ 0.37
VARS2-211ENST00000541562 KIF23Q02241 960 aaPredicted RBP17.39■□□□□ 0.37
VARS2-211ENST00000541562 SYT10Q6XYQ8 523 aa17.39■□□□□ 0.37
VARS2-211ENST00000541562 PLA2G4DQ86XP0 818 aa17.39■□□□□ 0.37
VARS2-211ENST00000541562 EPB41L4AQ9HCS5 686 aaPredicted RBP17.39■□□□□ 0.37
VARS2-211ENST00000541562 CAMTA1Q9Y6Y1 1673 aa17.39■□□□□ 0.37
VARS2-211ENST00000541562 LONRF3Q496Y0 759 aa17.39■□□□□ 0.37
VARS2-211ENST00000541562 NAA16Q6N069 864 aaPredicted RBP17.39■□□□□ 0.37
VARS2-211ENST00000541562 FMR1NBQ8N0W7 255 aaPredicted RBP17.39■□□□□ 0.37
VARS2-211ENST00000541562 SPATA5Q8NB90 893 aa17.39■□□□□ 0.37
VARS2-211ENST00000541562 TDRD7Q8NHU6 1098 aaKnown RBP17.39■□□□□ 0.37
VARS2-211ENST00000541562 VPS54Q9P1Q0 977 aa17.39■□□□□ 0.37
VARS2-211ENST00000541562 PTPN14Q15678 1187 aa17.39■□□□□ 0.37
VARS2-211ENST00000541562 FAM47AQ5JRC9 791 aa17.39■□□□□ 0.37
VARS2-211ENST00000541562 ZNF274Q96GC6 653 aaPredicted RBP17.39■□□□□ 0.37
VARS2-211ENST00000541562 CABP5Q9NP86 173 aa17.39■□□□□ 0.37
VARS2-211ENST00000541562 KIAA1468Q9P260 1216 aa17.39■□□□□ 0.37
VARS2-211ENST00000541562 IFNL3Q8IZI9 196 aa17.38■□□□□ 0.37
VARS2-211ENST00000541562 CARD10Q9BWT7 1032 aa17.38■□□□□ 0.37
VARS2-211ENST00000541562 C3orf67Q6ZVT6 689 aa17.38■□□□□ 0.37
VARS2-211ENST00000541562 ADGRA1Q86SQ6 560 aa17.38■□□□□ 0.37
VARS2-211ENST00000541562 CNNM3Q8NE01 707 aa17.38■□□□□ 0.37
VARS2-211ENST00000541562 ZNF215Q9UL58 517 aaPredicted RBP17.38■□□□□ 0.37
VARS2-211ENST00000541562 PES1O00541 588 aaKnown RBP17.38■□□□□ 0.37
VARS2-211ENST00000541562 KLRK1P26718 216 aa17.38■□□□□ 0.37
VARS2-211ENST00000541562 ENGASEQ8NFI3 743 aa17.38■□□□□ 0.37
VARS2-211ENST00000541562 MFSD6Q6ZSS7 791 aa17.37■□□□□ 0.37
VARS2-211ENST00000541562 POLR2DO15514 142 aaKnown RBP17.37■□□□□ 0.37
VARS2-211ENST00000541562 DHX16O60231 1041 aaKnown RBP17.37■□□□□ 0.37
VARS2-211ENST00000541562 CYP19A1P11511 503 aaPredicted RBP17.37■□□□□ 0.37
VARS2-211ENST00000541562 FANCLQ9NW38 375 aa17.37■□□□□ 0.37
VARS2-211ENST00000541562 AFDNP55196 1824 aaKnown RBP17.36■□□□□ 0.37
VARS2-211ENST00000541562 ERCC3P19447 782 aa17.36■□□□□ 0.37
VARS2-211ENST00000541562 SHC4Q6S5L8 630 aa17.36■□□□□ 0.37
VARS2-211ENST00000541562 LLPHQ9BRT6 129 aaKnown RBP17.36■□□□□ 0.37
VARS2-211ENST00000541562 PRR29P0C7W0 189 aa17.36■□□□□ 0.37
VARS2-211ENST00000541562 ADKP55263 362 aaKnown RBP17.36■□□□□ 0.37
VARS2-211ENST00000541562 ADALQ6DHV7 355 aa17.36■□□□□ 0.37
VARS2-211ENST00000541562 PCDHB6Q9Y5E3 794 aa17.36■□□□□ 0.37
VARS2-211ENST00000541562 LMO7Q8WWI1 1683 aa17.36■□□□□ 0.37
VARS2-211ENST00000541562 ELF2Q15723 593 aa17.35■□□□□ 0.37
VARS2-211ENST00000541562 DIS3L2Q8IYB7 885 aaKnown RBP17.35■□□□□ 0.37
VARS2-211ENST00000541562 UTP14AQ9BVJ6 771 aaKnown RBP17.35■□□□□ 0.37
VARS2-211ENST00000541562 MAP3K12Q12852 859 aa17.35■□□□□ 0.37
VARS2-211ENST00000541562 CPLX2Q6PUV4 134 aaKnown RBP17.35■□□□□ 0.37
VARS2-211ENST00000541562 DHX58Q96C10 678 aa17.35■□□□□ 0.37
VARS2-211ENST00000541562 STRBPQ96SI9 672 aaKnown RBP17.35■□□□□ 0.37
VARS2-211ENST00000541562 ST7Q9NRC1 585 aa17.35■□□□□ 0.37
VARS2-211ENST00000541562 VEGFAP15692 232 aaPredicted RBP17.35■□□□□ 0.37
VARS2-211ENST00000541562 PDE4BQ07343 736 aa17.35■□□□□ 0.37
VARS2-211ENST00000541562 PKNOX2Q96KN3 472 aa17.35■□□□□ 0.37
VARS2-211ENST00000541562 DESI2Q9BSY9 194 aa17.35■□□□□ 0.37
VARS2-211ENST00000541562 CPVLQ9H3G5 476 aa17.35■□□□□ 0.37
VARS2-211ENST00000541562 SSRP1Q08945 709 aaKnown RBP17.34■□□□□ 0.37
VARS2-211ENST00000541562 PCDHA5Q9Y5H7 936 aa17.34■□□□□ 0.37
VARS2-211ENST00000541562 ZNF174Q15697 407 aa17.34■□□□□ 0.37
VARS2-211ENST00000541562 SPTLC3Q9NUV7 552 aa17.34■□□□□ 0.37
VARS2-211ENST00000541562 TULP1O00294 542 aaPredicted RBP17.34■□□□□ 0.37
VARS2-211ENST00000541562 PDE8AO60658 829 aa17.34■□□□□ 0.37
VARS2-211ENST00000541562 CRKLP46109 303 aaKnown RBP17.34■□□□□ 0.37
VARS2-211ENST00000541562 UBASH3AP57075 661 aa17.34■□□□□ 0.37
VARS2-211ENST00000541562 LRRFIP1Q32MZ4 808 aaKnown RBP17.34■□□□□ 0.37
VARS2-211ENST00000541562 FOXP4Q8IVH2 680 aaPredicted RBP17.34■□□□□ 0.37
VARS2-211ENST00000541562 UBAC1Q9BSL1 405 aa17.34■□□□□ 0.37
VARS2-211ENST00000541562 RTEL1Q9NZ71 1219 aa17.34■□□□□ 0.37
VARS2-211ENST00000541562 DHX8Q14562 1220 aaKnown RBP17.33■□□□□ 0.37
VARS2-211ENST00000541562 WTAPQ15007 396 aa17.33■□□□□ 0.37
VARS2-211ENST00000541562 PRIMPOLQ96LW4 560 aa17.33■□□□□ 0.37
VARS2-211ENST00000541562 SERTAD1Q9UHV2 236 aa17.33■□□□□ 0.37
VARS2-211ENST00000541562 DNAI1Q9UI46 699 aa17.33■□□□□ 0.37
VARS2-211ENST00000541562 V9GY48 417 aaPredicted RBP17.33■□□□□ 0.37
VARS2-211ENST00000541562 ERICH2A1L162 156 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms