RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 RASA1P20936 1047 aa5.8□□□□□ -1.48
C2CD3-214ENST00000540057 COL9A3Q14050 684 aaPredicted RBP5.8□□□□□ -1.48
C2CD3-214ENST00000540057 CRTC2Q53ET0 693 aaPredicted RBP5.8□□□□□ -1.48
C2CD3-214ENST00000540057 TNFRSF25Q93038 417 aa5.8□□□□□ -1.48
C2CD3-214ENST00000540057 SUSD3Q96L08 255 aa5.8□□□□□ -1.48
C2CD3-214ENST00000540057 CARD10Q9BWT7 1032 aa5.8□□□□□ -1.48
C2CD3-214ENST00000540057 BRD7Q9NPI1 651 aa5.8□□□□□ -1.48
C2CD3-214ENST00000540057 TFCP2L1Q9NZI6 479 aa5.8□□□□□ -1.48
C2CD3-214ENST00000540057 NOP53Q9NZM5 478 aaKnown RBP5.8□□□□□ -1.48
C2CD3-214ENST00000540057 STARD13Q9Y3M8 1113 aa5.8□□□□□ -1.48
C2CD3-214ENST00000540057 SLIT3O75094 1523 aa5.79□□□□□ -1.48
C2CD3-214ENST00000540057 SPEM2Q0P670 501 aa5.79□□□□□ -1.48
C2CD3-214ENST00000540057 PTK7Q13308 1070 aa5.79□□□□□ -1.48
C2CD3-214ENST00000540057 RAB44Q7Z6P3 723 aaPredicted RBP5.79□□□□□ -1.48
C2CD3-214ENST00000540057 PPP1R12CQ9BZL4 782 aa5.79□□□□□ -1.48
C2CD3-214ENST00000540057 CD2APQ9Y5K6 639 aa5.79□□□□□ -1.48
C2CD3-214ENST00000540057 ABCC6O95255 1503 aa5.79□□□□□ -1.48
C2CD3-214ENST00000540057 TRPM1Q7Z4N2 1603 aa5.78□□□□□ -1.48
C2CD3-214ENST00000540057 HSPA1AP0DMV8 641 aaKnown RBP5.78□□□□□ -1.48
C2CD3-214ENST00000540057 HSPA1BP0DMV9 641 aaKnown RBP5.78□□□□□ -1.48
C2CD3-214ENST00000540057 SEC13P55735 322 aa5.78□□□□□ -1.48
C2CD3-214ENST00000540057 MSL1Q68DK7 614 aa5.78□□□□□ -1.48
C2CD3-214ENST00000540057 COL23A1Q86Y22 540 aaPredicted RBP5.78□□□□□ -1.48
C2CD3-214ENST00000540057 ALDH16A1Q8IZ83 802 aa5.78□□□□□ -1.48
C2CD3-214ENST00000540057 SCG3Q8WXD2 468 aaKnown RBP5.78□□□□□ -1.48
C2CD3-214ENST00000540057 CEP63Q96MT8 703 aa5.78□□□□□ -1.48
C2CD3-214ENST00000540057 CDK19Q9BWU1 502 aa5.78□□□□□ -1.48
C2CD3-214ENST00000540057 PLVAPQ9BX97 442 aa5.78□□□□□ -1.48
C2CD3-214ENST00000540057 NEUROD4Q9HD90 331 aa5.78□□□□□ -1.48
C2CD3-214ENST00000540057 NMRK2Q9NPI5 230 aa5.78□□□□□ -1.48
C2CD3-214ENST00000540057 CHMP3Q9Y3E7 222 aa5.78□□□□□ -1.48
C2CD3-214ENST00000540057 PCNTO95613 3336 aa5.78□□□□□ -1.48
C2CD3-214ENST00000540057 CICQ96RK0 1608 aaPredicted RBP5.77□□□□□ -1.48
C2CD3-214ENST00000540057 CPSF1Q10570 1443 aaKnown RBP5.77□□□□□ -1.49
C2CD3-214ENST00000540057 PPIP5K1Q6PFW1 1433 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 USP17L15C9J2P7 530 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 USP17L10C9JJH3 530 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 USP17L13C9JLJ4 530 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 USP17L12C9JPN9 530 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 USP17L11C9JVI0 530 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 USP17L21D6R901 530 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 USP17L18D6R9N7 530 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 USP17L22D6RA61 530 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 USP17L17D6RBQ6 530 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 USP17L19D6RCP7 530 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 USP17L20D6RJB6 530 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 K7ELQ4 463 aaPredicted RBP5.77□□□□□ -1.49
C2CD3-214ENST00000540057 LGR5O75473 907 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 ALBP02768 609 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 FURINP09958 794 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 ADH7P40394 386 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 USP17L24Q0WX57 530 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 DPYDQ12882 1025 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 BTLAQ7Z6A9 289 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 GAS2L2Q8NHY3 880 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 PRDM6Q9NQX0 595 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 ANKIB1Q9P2G1 1089 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 KCNH4Q9UQ05 1017 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 CCDC7Q96M83 1385 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 LY75O60449 1722 aa5.77□□□□□ -1.49
C2CD3-214ENST00000540057 IGSF1Q8N6C5 1336 aa5.76□□□□□ -1.49
C2CD3-214ENST00000540057 FAM196BA6NMK8 535 aa5.76□□□□□ -1.49
C2CD3-214ENST00000540057 M0R082 166 aa5.76□□□□□ -1.49
C2CD3-214ENST00000540057 SPATA31C1P0DKV0 1188 aa5.76□□□□□ -1.49
C2CD3-214ENST00000540057 GRNP28799 593 aaKnown RBP5.76□□□□□ -1.49
C2CD3-214ENST00000540057 FSTL1Q12841 308 aa5.76□□□□□ -1.49
C2CD3-214ENST00000540057 C20orf204Q6ZNR8 217 aa5.76□□□□□ -1.49
C2CD3-214ENST00000540057 C8orf86Q6ZUL3 223 aa5.76□□□□□ -1.49
C2CD3-214ENST00000540057 ARHGEF25Q86VW2 580 aa5.76□□□□□ -1.49
C2CD3-214ENST00000540057 ZNF417Q8TAU3 575 aa5.76□□□□□ -1.49
C2CD3-214ENST00000540057 CALR3Q96L12 384 aaKnown RBP5.76□□□□□ -1.49
C2CD3-214ENST00000540057 ZNF587Q96SQ5 575 aaPredicted RBP5.76□□□□□ -1.49
C2CD3-214ENST00000540057 DMGDHQ9UI17 866 aaKnown RBP5.76□□□□□ -1.49
C2CD3-214ENST00000540057 BCS1LQ9Y276 419 aa5.76□□□□□ -1.49
C2CD3-214ENST00000540057 PIK3C2AO00443 1686 aa5.75□□□□□ -1.49
C2CD3-214ENST00000540057 NID1P14543 1247 aa5.75□□□□□ -1.49
C2CD3-214ENST00000540057 ALAS2P22557 587 aa5.75□□□□□ -1.49
C2CD3-214ENST00000540057 IGFBP4P22692 258 aa5.75□□□□□ -1.49
C2CD3-214ENST00000540057 ITGB7P26010 798 aa5.75□□□□□ -1.49
C2CD3-214ENST00000540057 RTN1Q16799 776 aa5.75□□□□□ -1.49
C2CD3-214ENST00000540057 IER5Q5VY09 327 aa5.75□□□□□ -1.49
C2CD3-214ENST00000540057 ANKMY2Q8IV38 441 aa5.75□□□□□ -1.49
C2CD3-214ENST00000540057 MICALL1Q8N3F8 863 aa5.75□□□□□ -1.49
C2CD3-214ENST00000540057 MPHOSPH9Q99550 1183 aa5.75□□□□□ -1.49
C2CD3-214ENST00000540057 RBM19Q9Y4C8 960 aaKnown RBP5.75□□□□□ -1.49
C2CD3-214ENST00000540057 TGFBR3LH3BV60 316 aa5.74□□□□□ -1.49
C2CD3-214ENST00000540057 IL2RBP14784 551 aa5.74□□□□□ -1.49
C2CD3-214ENST00000540057 C16orf71Q8IYS4 520 aaPredicted RBP5.74□□□□□ -1.49
C2CD3-214ENST00000540057 NSD2O96028 1365 aa5.73□□□□□ -1.49
C2CD3-214ENST00000540057 FAM229AH3BQW9 127 aa5.73□□□□□ -1.49
C2CD3-214ENST00000540057 LMOD1P29536 600 aaPredicted RBP5.73□□□□□ -1.49
C2CD3-214ENST00000540057 KCNH5Q8NCM2 988 aa5.73□□□□□ -1.49
C2CD3-214ENST00000540057 BHMTQ93088 406 aa5.73□□□□□ -1.49
C2CD3-214ENST00000540057 CCNL1Q9UK58 526 aaPredicted RBP5.73□□□□□ -1.49
C2CD3-214ENST00000540057 DOT1LQ8TEK3 1739 aa5.73□□□□□ -1.49
C2CD3-214ENST00000540057 USP54Q70EL1 1684 aa5.72□□□□□ -1.49
C2CD3-214ENST00000540057 QRICH2Q9H0J4 1663 aa5.72□□□□□ -1.49
C2CD3-214ENST00000540057 KIAA1551Q9HCM1 1747 aa5.72□□□□□ -1.49
C2CD3-214ENST00000540057 WEE1P30291 646 aa5.72□□□□□ -1.49
C2CD3-214ENST00000540057 NEUROD1Q13562 356 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms