RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 EPHX2P34913 555 aa22.72■■□□□ 1.23
TNFRSF1A-213ENST00000540022 CRKP46108 304 aa22.72■■□□□ 1.23
TNFRSF1A-213ENST00000540022 HDLBPQ00341 1268 aaKnown RBP22.72■■□□□ 1.23
TNFRSF1A-213ENST00000540022 TEKT1Q969V4 418 aa22.72■■□□□ 1.23
TNFRSF1A-213ENST00000540022 AIDAQ96BJ3 306 aa22.72■■□□□ 1.23
TNFRSF1A-213ENST00000540022 ARMT1Q9H993 441 aa22.72■■□□□ 1.23
TNFRSF1A-213ENST00000540022 AATFQ9NY61 560 aaKnown RBP eCLIP22.72■■□□□ 1.23
TNFRSF1A-213ENST00000540022 USP17L8P0C7I0 530 aa22.72■■□□□ 1.23
TNFRSF1A-213ENST00000540022 MFAP1P55081 439 aaKnown RBP22.72■■□□□ 1.23
TNFRSF1A-213ENST00000540022 CHADLQ6NUI6 762 aa22.72■■□□□ 1.23
TNFRSF1A-213ENST00000540022 HHIPL2Q6UWX4 724 aa22.72■■□□□ 1.23
TNFRSF1A-213ENST00000540022 LCORLQ8N3X6 602 aa22.72■■□□□ 1.23
TNFRSF1A-213ENST00000540022 STRBPQ96SI9 672 aaKnown RBP22.72■■□□□ 1.23
TNFRSF1A-213ENST00000540022 GPRC5DQ9NZD1 345 aa22.72■■□□□ 1.23
TNFRSF1A-213ENST00000540022 CNOT7Q9UIV1 285 aaKnown RBP22.72■■□□□ 1.23
TNFRSF1A-213ENST00000540022 GPR75-ASB3A0A0A6YYF3 556 aa22.71■■□□□ 1.23
TNFRSF1A-213ENST00000540022 EGFRP00533 1210 aa22.71■■□□□ 1.23
TNFRSF1A-213ENST00000540022 BTDP43251 543 aa22.71■■□□□ 1.23
TNFRSF1A-213ENST00000540022 HTRA3P83110 453 aa22.71■■□□□ 1.23
TNFRSF1A-213ENST00000540022 LDHDQ86WU2 507 aa22.71■■□□□ 1.23
TNFRSF1A-213ENST00000540022 MICALL2Q8IY33 904 aa22.71■■□□□ 1.23
TNFRSF1A-213ENST00000540022 DPF2Q92785 391 aa22.71■■□□□ 1.23
TNFRSF1A-213ENST00000540022 ANO2Q9NQ90 1003 aa22.71■■□□□ 1.23
TNFRSF1A-213ENST00000540022 SERPINA10Q9UK55 444 aa22.71■■□□□ 1.23
TNFRSF1A-213ENST00000540022 PCDHAC2Q9Y5I4 1007 aa22.71■■□□□ 1.23
TNFRSF1A-213ENST00000540022 PPP4CP60510 307 aa22.7■■□□□ 1.22
TNFRSF1A-213ENST00000540022 OGFOD1Q8N543 542 aa22.7■■□□□ 1.22
TNFRSF1A-213ENST00000540022 LSG1Q9H089 658 aaKnown RBP22.7■■□□□ 1.22
TNFRSF1A-213ENST00000540022 HDAC9Q9UKV0 1011 aa22.7■■□□□ 1.22
TNFRSF1A-213ENST00000540022 MYH7P12883 1935 aa22.7■■□□□ 1.22
TNFRSF1A-213ENST00000540022 REC8O95072 547 aa22.69■■□□□ 1.22
TNFRSF1A-213ENST00000540022 EAPPQ56P03 285 aaPredicted RBP22.69■■□□□ 1.22
TNFRSF1A-213ENST00000540022 VPS53Q5VIR6 699 aa22.69■■□□□ 1.22
TNFRSF1A-213ENST00000540022 APOBEC3HQ6NTF7 200 aaKnown RBP22.69■■□□□ 1.22
TNFRSF1A-213ENST00000540022 DNAJC5GQ8N7S2 189 aa22.69■■□□□ 1.22
TNFRSF1A-213ENST00000540022 ZDHHC15Q96MV8 337 aa22.69■■□□□ 1.22
TNFRSF1A-213ENST00000540022 BAG3O95817 575 aa22.68■■□□□ 1.22
TNFRSF1A-213ENST00000540022 RBM5P52756 815 aaKnown RBP eCLIP22.68■■□□□ 1.22
TNFRSF1A-213ENST00000540022 PTH1RQ03431 593 aa22.68■■□□□ 1.22
TNFRSF1A-213ENST00000540022 CFAP100Q494V2 611 aa22.68■■□□□ 1.22
TNFRSF1A-213ENST00000540022 KIAA1211Q6ZU35 1233 aa22.68■■□□□ 1.22
TNFRSF1A-213ENST00000540022 SAMD7Q7Z3H4 446 aa22.68■■□□□ 1.22
TNFRSF1A-213ENST00000540022 NOL10Q9BSC4 688 aaKnown RBP22.68■■□□□ 1.22
TNFRSF1A-213ENST00000540022 PCNTO95613 3336 aa22.68■■□□□ 1.22
TNFRSF1A-213ENST00000540022 FOXP2O15409 715 aa22.67■■□□□ 1.22
TNFRSF1A-213ENST00000540022 LMOD1P29536 600 aaPredicted RBP22.67■■□□□ 1.22
TNFRSF1A-213ENST00000540022 ZNF280AP59817 542 aaPredicted RBP22.67■■□□□ 1.22
TNFRSF1A-213ENST00000540022 PNMA8AQ86V59 439 aaPredicted RBP22.67■■□□□ 1.22
TNFRSF1A-213ENST00000540022 PRKAB2O43741 272 aa22.67■■□□□ 1.22
TNFRSF1A-213ENST00000540022 HSPD1P10809 573 aaKnown RBP22.67■■□□□ 1.22
TNFRSF1A-213ENST00000540022 RHBDL3P58872 404 aa22.67■■□□□ 1.22
TNFRSF1A-213ENST00000540022 TRPM4Q8TD43 1214 aa22.67■■□□□ 1.22
TNFRSF1A-213ENST00000540022 SH3RF3Q8TEJ3 882 aaPredicted RBP22.67■■□□□ 1.22
TNFRSF1A-213ENST00000540022 EIF5BO60841 1220 aaKnown RBP22.66■■□□□ 1.22
TNFRSF1A-213ENST00000540022 TBC1D10BQ4KMP7 808 aaPredicted RBP22.66■■□□□ 1.22
TNFRSF1A-213ENST00000540022 RBM26Q5T8P6 1007 aaKnown RBP22.66■■□□□ 1.22
TNFRSF1A-213ENST00000540022 PRMT6Q96LA8 375 aaPredicted RBP22.66■■□□□ 1.22
TNFRSF1A-213ENST00000540022 USP26Q9BXU7 913 aa22.66■■□□□ 1.22
TNFRSF1A-213ENST00000540022 SLC4A4Q9Y6R1 1079 aa22.66■■□□□ 1.22
TNFRSF1A-213ENST00000540022 MMP14P50281 582 aa22.65■■□□□ 1.22
TNFRSF1A-213ENST00000540022 HIRAP54198 1017 aaPredicted RBP22.65■■□□□ 1.22
TNFRSF1A-213ENST00000540022 DLGAP5Q15398 846 aa22.65■■□□□ 1.22
TNFRSF1A-213ENST00000540022 SDR42E1Q8WUS8 393 aa22.65■■□□□ 1.22
TNFRSF1A-213ENST00000540022 DSCC1Q9BVC3 393 aa22.65■■□□□ 1.22
TNFRSF1A-213ENST00000540022 GSG1L2A8MUP6 293 aa22.64■■□□□ 1.21
TNFRSF1A-213ENST00000540022 PLCG2P16885 1265 aa22.64■■□□□ 1.21
TNFRSF1A-213ENST00000540022 GNAT2P19087 354 aa22.64■■□□□ 1.21
TNFRSF1A-213ENST00000540022 CDC42EP5Q6NZY7 148 aa22.64■■□□□ 1.21
TNFRSF1A-213ENST00000540022 CERS3Q8IU89 383 aa22.64■■□□□ 1.21
TNFRSF1A-213ENST00000540022 MTMR14Q8NCE2 650 aa22.64■■□□□ 1.21
TNFRSF1A-213ENST00000540022 MAP4K1Q92918 833 aa22.64■■□□□ 1.21
TNFRSF1A-213ENST00000540022 CRNKL1Q9BZJ0 848 aaKnown RBP22.64■■□□□ 1.21
TNFRSF1A-213ENST00000540022 MYOZ2Q9NPC6 264 aa22.64■■□□□ 1.21
TNFRSF1A-213ENST00000540022 CLEC11AQ9Y240 323 aa22.64■■□□□ 1.21
TNFRSF1A-213ENST00000540022 SPDYE2BA6NHP3 402 aa22.63■■□□□ 1.21
TNFRSF1A-213ENST00000540022 PATL2C9JE40 543 aaKnown RBP22.63■■□□□ 1.21
TNFRSF1A-213ENST00000540022 H7C1D1 291 aa22.63■■□□□ 1.21
TNFRSF1A-213ENST00000540022 ITGBL1O95965 494 aaPredicted RBP22.63■■□□□ 1.21
TNFRSF1A-213ENST00000540022 SPDYE6P0CI01 402 aa22.63■■□□□ 1.21
TNFRSF1A-213ENST00000540022 ZBED3Q96IU2 234 aaPredicted RBP22.63■■□□□ 1.21
TNFRSF1A-213ENST00000540022 EPB41L4AQ9HCS5 686 aaPredicted RBP22.63■■□□□ 1.21
TNFRSF1A-213ENST00000540022 USP40Q9NVE5 1235 aa22.63■■□□□ 1.21
TNFRSF1A-213ENST00000540022 PASKQ96RG2 1323 aa22.63■■□□□ 1.21
TNFRSF1A-213ENST00000540022 MYH2Q9UKX2 1941 aa22.63■■□□□ 1.21
TNFRSF1A-213ENST00000540022 APPP05067 770 aa22.62■■□□□ 1.21
TNFRSF1A-213ENST00000540022 TEX11Q8IYF3 940 aa22.62■■□□□ 1.21
TNFRSF1A-213ENST00000540022 ADARB2Q9NS39 739 aaKnown RBP22.62■■□□□ 1.21
TNFRSF1A-213ENST00000540022 ASTN2O75129 1339 aaPredicted RBP22.62■■□□□ 1.21
TNFRSF1A-213ENST00000540022 POLR2AP24928 1970 aaKnown RBP22.62■■□□□ 1.21
TNFRSF1A-213ENST00000540022 EPB41L2O43491 1005 aaKnown RBP22.62■■□□□ 1.21
TNFRSF1A-213ENST00000540022 MAP1SQ66K74 1059 aaPredicted RBP22.62■■□□□ 1.21
TNFRSF1A-213ENST00000540022 TDRD3Q9H7E2 651 aaKnown RBP22.62■■□□□ 1.21
TNFRSF1A-213ENST00000540022 RBM8AQ9Y5S9 174 aaKnown RBP22.62■■□□□ 1.21
TNFRSF1A-213ENST00000540022 WNT10BO00744 389 aa22.61■■□□□ 1.21
TNFRSF1A-213ENST00000540022 KIF4BQ2VIQ3 1234 aa22.61■■□□□ 1.21
TNFRSF1A-213ENST00000540022 NBPF9Q3BBW0 867 aa22.61■■□□□ 1.21
TNFRSF1A-213ENST00000540022 USP50Q70EL3 339 aaPredicted RBP22.61■■□□□ 1.21
TNFRSF1A-213ENST00000540022 IFNL3Q8IZI9 196 aa22.61■■□□□ 1.21
TNFRSF1A-213ENST00000540022 TRPM7Q96QT4 1865 aa22.6■■□□□ 1.21
TNFRSF1A-213ENST00000540022 WDHD1O75717 1129 aaPredicted RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms