RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 PARP9Q8IXQ6 854 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 CEP57L1Q8IYX8 460 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 OGFOD1Q8N543 542 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 ACRBPQ8NEB7 543 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 TBC1D5Q92609 795 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 MS4A3Q96HJ5 214 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 SPAG5Q96R06 1193 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 TMEM106CQ9BVX2 250 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 RMI1Q9H9A7 625 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 SENP2Q9HC62 589 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 ANKIB1Q9P2G1 1089 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 CTNNAL1Q9UBT7 734 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 DDX20Q9UHI6 824 aaKnown RBP6.97□□□□□ -1.29
SNHG1-211ENST00000539921 CHIC2Q9UKJ5 165 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 INO80Q9ULG1 1556 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-211ENST00000539921 PCDHGC5Q9Y5F6 944 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 ATP7BP35670 1465 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 ABCC4O15439 1325 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 AOX1Q06278 1338 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 ZC3H13Q5T200 1668 aaKnown RBP6.96□□□□□ -1.29
SNHG1-211ENST00000539921 UNC13BO14795 1591 aa6.96□□□□□ -1.29
SNHG1-211ENST00000539921 NPATQ14207 1427 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 RBM47A0AV96 593 aaKnown RBP6.96□□□□□ -1.3
SNHG1-211ENST00000539921 ZBTB7BO15156 539 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-211ENST00000539921 CBFA2T2O43439 604 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 PRC1O43663 620 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 NPTXRO95502 500 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 GNAI3P08754 354 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 VDRP11473 427 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 HARSP12081 509 aaKnown RBP6.96□□□□□ -1.3
SNHG1-211ENST00000539921 VCAM1P19320 739 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 POLD1P28340 1107 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 CCT5P48643 541 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 CCNG1P51959 295 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 NAP1L1P55209 391 aaKnown RBP6.96□□□□□ -1.3
SNHG1-211ENST00000539921 PSMC1P62191 440 aaKnown RBP6.96□□□□□ -1.3
SNHG1-211ENST00000539921 BLMHQ13867 455 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 SGSM1Q2NKQ1 1148 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 SPTY2D1Q68D10 685 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-211ENST00000539921 DNAJC14Q6Y2X3 702 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-211ENST00000539921 UBE3BQ7Z3V4 1068 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 MYLK4Q86YV6 388 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-211ENST00000539921 FAM114A1Q8IWE2 563 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 AFAP1Q8N556 730 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 TMEM57Q8N5G2 664 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 LRRN4CLQ8ND94 238 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 SMARCC2Q8TAQ2 1214 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 CNKSR1Q969H4 720 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 TEKT1Q969V4 418 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 RBM41Q96IZ5 413 aaKnown RBP6.96□□□□□ -1.3
SNHG1-211ENST00000539921 MS4A4AQ96JQ5 239 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 GORASP1Q9BQQ3 440 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 LUC7LQ9NQ29 371 aaKnown RBP6.96□□□□□ -1.3
SNHG1-211ENST00000539921 PAPOLBQ9NRJ5 636 aaKnown RBP6.96□□□□□ -1.3
SNHG1-211ENST00000539921 MYO1AQ9UBC5 1043 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 SWAP70Q9UH65 585 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 HOOK1Q9UJC3 728 aaKnown RBP6.96□□□□□ -1.3
SNHG1-211ENST00000539921 CDC23Q9UJX2 597 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 TMCO1Q9UM00 188 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 MYO3AQ8NEV4 1616 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 CDK12Q9NYV4 1490 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-211ENST00000539921 TUBGCP6Q96RT7 1819 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 GRIN2DO15399 1336 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 UBN2Q6ZU65 1347 aa6.96□□□□□ -1.3
SNHG1-211ENST00000539921 CEMIPQ8WUJ3 1361 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 MADDQ8WXG6 1647 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 EME2A4GXA9 379 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-211ENST00000539921 A6NHS1 94 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 BECN2A8MW95 431 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 B4DLN1 442 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 TMEM232C9JQI7 657 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 KIF3BO15066 747 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 CUTAO60888 179 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 MYL1P05976 194 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 GHRP10912 638 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 TPP2P29144 1249 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-211ENST00000539921 PSMC4P43686 418 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 SESN3P58005 492 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 KCNB1Q14721 858 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 LBRQ14739 615 aaKnown RBP6.95□□□□□ -1.3
SNHG1-211ENST00000539921 KBTBD12Q3ZCT8 623 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 LACTB2Q53H82 288 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-211ENST00000539921 CYB5D1Q6P9G0 228 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 RPAP2Q8IXW5 612 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-211ENST00000539921 CCDC146Q8IYE0 955 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 LRRC43Q8N309 656 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 TCP11L2Q8N4U5 519 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 SMYD1Q8NB12 490 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 BCAS4Q8TDM0 211 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 SMCR8Q8TEV9 937 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-211ENST00000539921 ANKRD24Q8TF21 1146 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 NUP133Q8WUM0 1156 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 BHMTQ93088 406 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 KIFC2Q96AC6 838 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 ZBTB10Q96DT7 871 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 CCDC114Q96M63 670 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 EPAS1Q99814 870 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 CCDC28BQ9BUN5 200 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 CAPS2Q9BXY5 557 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 TSGA10Q9BZW7 698 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms