RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 DBNLQ9UJU6 430 aaKnown RBP19.26■□□□□ 0.67
CIT-210ENST00000539413 MKRN3Q13064 507 aaKnown RBP19.25■□□□□ 0.67
CIT-210ENST00000539413 CCDC158Q5M9N0 1113 aa19.25■□□□□ 0.67
CIT-210ENST00000539413 FKBP1CQ5VVH2 108 aa19.25■□□□□ 0.67
CIT-210ENST00000539413 ERICH6Q7L0X2 663 aa19.25■□□□□ 0.67
CIT-210ENST00000539413 FAM83AQ86UY5 434 aa19.25■□□□□ 0.67
CIT-210ENST00000539413 CLMNQ96JQ2 1002 aa19.25■□□□□ 0.67
CIT-210ENST00000539413 CSRNP1Q96S65 589 aa19.25■□□□□ 0.67
CIT-210ENST00000539413 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.25■□□□□ 0.67
CIT-210ENST00000539413 GAKO14976 1311 aa19.25■□□□□ 0.67
CIT-210ENST00000539413 HMMRO75330 724 aa19.24■□□□□ 0.67
CIT-210ENST00000539413 MECOMQ03112 1051 aa19.24■□□□□ 0.67
CIT-210ENST00000539413 ERC1Q8IUD2 1116 aa19.24■□□□□ 0.67
CIT-210ENST00000539413 SNRKQ9NRH2 765 aa19.24■□□□□ 0.67
CIT-210ENST00000539413 USP40Q9NVE5 1235 aa19.24■□□□□ 0.67
CIT-210ENST00000539413 CA12O43570 354 aa19.23■□□□□ 0.67
CIT-210ENST00000539413 IREB2P48200 963 aaKnown RBP19.23■□□□□ 0.67
CIT-210ENST00000539413 NFIAQ12857 509 aa19.23■□□□□ 0.67
CIT-210ENST00000539413 HSP90AB4PQ58FF6 505 aa19.23■□□□□ 0.67
CIT-210ENST00000539413 ZNF384Q8TF68 577 aa19.23■□□□□ 0.67
CIT-210ENST00000539413 IL1RAPL2Q9NP60 686 aa19.23■□□□□ 0.67
CIT-210ENST00000539413 APBB1O00213 710 aa19.22■□□□□ 0.67
CIT-210ENST00000539413 TCP10Q12799 353 aa19.22■□□□□ 0.67
CIT-210ENST00000539413 SLF2Q8IX21 1173 aa19.22■□□□□ 0.67
CIT-210ENST00000539413 RHPN1Q8TCX5 695 aa19.22■□□□□ 0.67
CIT-210ENST00000539413 SLC10A4Q96EP9 437 aa19.22■□□□□ 0.67
CIT-210ENST00000539413 FAM163AQ96GL9 167 aaPredicted RBP19.22■□□□□ 0.67
CIT-210ENST00000539413 ZNF512BQ96KM6 892 aaPredicted RBP19.22■□□□□ 0.67
CIT-210ENST00000539413 MROH7-TTC4A0A0A0MT08 1334 aa19.22■□□□□ 0.67
CIT-210ENST00000539413 RPAP1Q9BWH6 1393 aaPredicted RBP19.21■□□□□ 0.67
CIT-210ENST00000539413 SPRYD7Q5W111 196 aa19.21■□□□□ 0.67
CIT-210ENST00000539413 AACSQ86V21 672 aa19.21■□□□□ 0.67
CIT-210ENST00000539413 REM2Q8IYK8 340 aaPredicted RBP19.21■□□□□ 0.67
CIT-210ENST00000539413 ANKRD13AQ8IZ07 590 aa19.21■□□□□ 0.67
CIT-210ENST00000539413 TNS4Q8IZW8 715 aa19.21■□□□□ 0.67
CIT-210ENST00000539413 FAM151AQ8WW52 585 aa19.21■□□□□ 0.67
CIT-210ENST00000539413 NSUN4Q96CB9 384 aaKnown RBP19.21■□□□□ 0.67
CIT-210ENST00000539413 RNF186Q9NXI6 227 aa19.21■□□□□ 0.67
CIT-210ENST00000539413 RAI14Q9P0K7 980 aa19.21■□□□□ 0.67
CIT-210ENST00000539413 FAM198AQ9UFP1 575 aa19.21■□□□□ 0.67
CIT-210ENST00000539413 MYH2Q9UKX2 1941 aa19.21■□□□□ 0.67
CIT-210ENST00000539413 OTOFQ9HC10 1997 aa19.21■□□□□ 0.67
CIT-210ENST00000539413 UNCXA6NJT0 531 aa19.2■□□□□ 0.66
CIT-210ENST00000539413 CYP2E1P05181 493 aaPredicted RBP19.2■□□□□ 0.66
CIT-210ENST00000539413 BTDP43251 543 aa19.2■□□□□ 0.66
CIT-210ENST00000539413 ZAP70P43403 619 aa19.2■□□□□ 0.66
CIT-210ENST00000539413 RRP1P56182 461 aaKnown RBP19.2■□□□□ 0.66
CIT-210ENST00000539413 KIF1BPQ96EK5 621 aa19.2■□□□□ 0.66
CIT-210ENST00000539413 WNK4Q96J92 1243 aa19.2■□□□□ 0.66
CIT-210ENST00000539413 LRP2BPQ9P2M1 347 aa19.2■□□□□ 0.66
CIT-210ENST00000539413 TRPA1O75762 1119 aa19.19■□□□□ 0.66
CIT-210ENST00000539413 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.19■□□□□ 0.66
CIT-210ENST00000539413 ZFPM1Q8IX07 1006 aa19.19■□□□□ 0.66
CIT-210ENST00000539413 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.19■□□□□ 0.66
CIT-210ENST00000539413 SAGE1Q9NXZ1 904 aa19.19■□□□□ 0.66
CIT-210ENST00000539413 RFX7Q2KHR2 1363 aa19.19■□□□□ 0.66
CIT-210ENST00000539413 AKAP11Q9UKA4 1901 aa19.18■□□□□ 0.66
CIT-210ENST00000539413 GPR75-ASB3A0A0A6YYF3 556 aa19.18■□□□□ 0.66
CIT-210ENST00000539413 RGS3P49796 1198 aa19.18■□□□□ 0.66
CIT-210ENST00000539413 GSTO1P78417 241 aa19.18■□□□□ 0.66
CIT-210ENST00000539413 IFFO2Q5TF58 517 aa19.18■□□□□ 0.66
CIT-210ENST00000539413 IDI2Q9BXS1 227 aa19.18■□□□□ 0.66
CIT-210ENST00000539413 ELP3Q9H9T3 547 aa19.18■□□□□ 0.66
CIT-210ENST00000539413 MAST2Q6P0Q8 1798 aa19.17■□□□□ 0.66
CIT-210ENST00000539413 RAB11FIP3O75154 756 aa19.17■□□□□ 0.66
CIT-210ENST00000539413 LDHCP07864 332 aa19.17■□□□□ 0.66
CIT-210ENST00000539413 GJA5P36382 358 aa19.17■□□□□ 0.66
CIT-210ENST00000539413 TM4SF4P48230 202 aa19.17■□□□□ 0.66
CIT-210ENST00000539413 RHBDL3P58872 404 aa19.17■□□□□ 0.66
CIT-210ENST00000539413 MAP3K9P80192 1104 aa19.17■□□□□ 0.66
CIT-210ENST00000539413 VGLL4Q14135 290 aa19.17■□□□□ 0.66
CIT-210ENST00000539413 MIGA2Q7L4E1 593 aa19.17■□□□□ 0.66
CIT-210ENST00000539413 CLASRPQ8N2M8 674 aaKnown RBP19.17■□□□□ 0.66
CIT-210ENST00000539413 HOOK2Q96ED9 719 aa19.17■□□□□ 0.66
CIT-210ENST00000539413 BCL11AQ9H165 835 aa19.17■□□□□ 0.66
CIT-210ENST00000539413 PIH1D3Q9NQM4 214 aaKnown RBP19.17■□□□□ 0.66
CIT-210ENST00000539413 NDUFB9Q9Y6M9 179 aa19.17■□□□□ 0.66
CIT-210ENST00000539413 ENTPD3O75355 529 aa19.16■□□□□ 0.66
CIT-210ENST00000539413 WDHD1O75717 1129 aaPredicted RBP19.16■□□□□ 0.66
CIT-210ENST00000539413 ZBTB48P10074 688 aaPredicted RBP19.16■□□□□ 0.66
CIT-210ENST00000539413 SREBF2Q12772 1141 aa19.16■□□□□ 0.66
CIT-210ENST00000539413 DCAF15Q66K64 600 aa19.16■□□□□ 0.66
CIT-210ENST00000539413 DDX4Q9NQI0 724 aaKnown RBP19.16■□□□□ 0.66
CIT-210ENST00000539413 PICALMQ13492 652 aa19.15■□□□□ 0.66
CIT-210ENST00000539413 NAA16Q6N069 864 aaPredicted RBP19.15■□□□□ 0.66
CIT-210ENST00000539413 CNKSR2Q8WXI2 1034 aa19.15■□□□□ 0.66
CIT-210ENST00000539413 OPTNQ96CV9 577 aa19.15■□□□□ 0.66
CIT-210ENST00000539413 WRNIP1Q96S55 665 aa19.15■□□□□ 0.66
CIT-210ENST00000539413 CSADQ9Y600 493 aa19.15■□□□□ 0.66
CIT-210ENST00000539413 MANSC4A6NHS7 340 aaPredicted RBP19.14■□□□□ 0.65
CIT-210ENST00000539413 IFIT2P09913 472 aaKnown RBP19.14■□□□□ 0.65
CIT-210ENST00000539413 SH3BP5LQ7L8J4 393 aa19.14■□□□□ 0.65
CIT-210ENST00000539413 ZKSCAN4Q969J2 545 aaPredicted RBP19.14■□□□□ 0.65
CIT-210ENST00000539413 ZNF341Q9BYN7 854 aa19.14■□□□□ 0.65
CIT-210ENST00000539413 ANTXR1Q9H6X2 564 aa19.14■□□□□ 0.65
CIT-210ENST00000539413 SNCAIPQ9Y6H5 919 aa19.14■□□□□ 0.65
CIT-210ENST00000539413 ADGRA1Q86SQ6 560 aa19.13■□□□□ 0.65
CIT-210ENST00000539413 LAMB1P07942 1786 aa19.13■□□□□ 0.65
CIT-210ENST00000539413 ATRNL1Q5VV63 1379 aa19.12■□□□□ 0.65
CIT-210ENST00000539413 DDTLA6NHG4 134 aaPredicted RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms