RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 GPR25O00155 361 aa23.55■■□□□ 1.36
TNFRSF1A-212ENST00000539372 IGF2BP3O00425 579 aaKnown RBP eCLIP23.55■■□□□ 1.36
TNFRSF1A-212ENST00000539372 INHBEP58166 350 aa23.55■■□□□ 1.36
TNFRSF1A-212ENST00000539372 TCP10Q12799 353 aa23.55■■□□□ 1.36
TNFRSF1A-212ENST00000539372 POLA2Q14181 598 aa23.55■■□□□ 1.36
TNFRSF1A-212ENST00000539372 GORABQ5T7V8 394 aa23.55■■□□□ 1.36
TNFRSF1A-212ENST00000539372 CTU1Q7Z7A3 348 aaKnown RBP23.55■■□□□ 1.36
TNFRSF1A-212ENST00000539372 ZGPATQ8N5A5 531 aaKnown RBP23.55■■□□□ 1.36
TNFRSF1A-212ENST00000539372 USP40Q9NVE5 1235 aa23.55■■□□□ 1.36
TNFRSF1A-212ENST00000539372 CSADQ9Y600 493 aa23.55■■□□□ 1.36
TNFRSF1A-212ENST00000539372 ZBTB22O15209 634 aa23.54■■□□□ 1.36
TNFRSF1A-212ENST00000539372 ALDH1A1P00352 501 aa23.54■■□□□ 1.36
TNFRSF1A-212ENST00000539372 ATP8B2P98198 1209 aa23.54■■□□□ 1.36
TNFRSF1A-212ENST00000539372 NFIAQ12857 509 aa23.54■■□□□ 1.36
TNFRSF1A-212ENST00000539372 DZIP1Q86YF9 867 aaKnown RBP23.54■■□□□ 1.36
TNFRSF1A-212ENST00000539372 PDS5AQ29RF7 1337 aaKnown RBP23.54■■□□□ 1.36
TNFRSF1A-212ENST00000539372 ZBTB7BO15156 539 aaPredicted RBP23.53■■□□□ 1.36
TNFRSF1A-212ENST00000539372 OS9Q13438 667 aaPredicted RBP23.53■■□□□ 1.36
TNFRSF1A-212ENST00000539372 MIGA2Q7L4E1 593 aa23.53■■□□□ 1.36
TNFRSF1A-212ENST00000539372 PANK1Q8TE04 598 aa23.53■■□□□ 1.36
TNFRSF1A-212ENST00000539372 WRNIP1Q96S55 665 aa23.53■■□□□ 1.36
TNFRSF1A-212ENST00000539372 RPAP1Q9BWH6 1393 aaPredicted RBP23.52■■□□□ 1.36
TNFRSF1A-212ENST00000539372 PI16Q6UXB8 463 aa23.52■■□□□ 1.36
TNFRSF1A-212ENST00000539372 SSH3Q8TE77 659 aa23.52■■□□□ 1.36
TNFRSF1A-212ENST00000539372 FAM151AQ8WW52 585 aa23.52■■□□□ 1.36
TNFRSF1A-212ENST00000539372 HOOK2Q96ED9 719 aa23.52■■□□□ 1.36
TNFRSF1A-212ENST00000539372 CFHR5Q9BXR6 569 aa23.52■■□□□ 1.36
TNFRSF1A-212ENST00000539372 HMG20BQ9P0W2 317 aa23.52■■□□□ 1.36
TNFRSF1A-212ENST00000539372 SPTY2D1Q68D10 685 aaPredicted RBP23.51■■□□□ 1.35
TNFRSF1A-212ENST00000539372 ZKSCAN4Q969J2 545 aaPredicted RBP23.51■■□□□ 1.35
TNFRSF1A-212ENST00000539372 OTUD5Q96G74 571 aa23.51■■□□□ 1.35
TNFRSF1A-212ENST00000539372 PTPN18Q99952 460 aa23.51■■□□□ 1.35
TNFRSF1A-212ENST00000539372 FAM198AQ9UFP1 575 aa23.51■■□□□ 1.35
TNFRSF1A-212ENST00000539372 FKTNO75072 461 aa23.5■■□□□ 1.35
TNFRSF1A-212ENST00000539372 SURF6O75683 361 aaKnown RBP23.5■■□□□ 1.35
TNFRSF1A-212ENST00000539372 NOM1Q5C9Z4 860 aaKnown RBP23.5■■□□□ 1.35
TNFRSF1A-212ENST00000539372 DCAF15Q66K64 600 aa23.5■■□□□ 1.35
TNFRSF1A-212ENST00000539372 SPATA5Q8NB90 893 aa23.5■■□□□ 1.35
TNFRSF1A-212ENST00000539372 MS4A4AQ96JQ5 239 aa23.5■■□□□ 1.35
TNFRSF1A-212ENST00000539372 SNCAIPQ9Y6H5 919 aa23.5■■□□□ 1.35
TNFRSF1A-212ENST00000539372 GAKO14976 1311 aa23.5■■□□□ 1.35
TNFRSF1A-212ENST00000539372 ARID4AP29374 1257 aaPredicted RBP23.49■■□□□ 1.35
TNFRSF1A-212ENST00000539372 OTUD7BQ6GQQ9 843 aa23.49■■□□□ 1.35
TNFRSF1A-212ENST00000539372 TBC1D9Q6ZT07 1266 aa23.49■■□□□ 1.35
TNFRSF1A-212ENST00000539372 ERICH6Q7L0X2 663 aa23.49■■□□□ 1.35
TNFRSF1A-212ENST00000539372 ZFPM1Q8IX07 1006 aa23.49■■□□□ 1.35
TNFRSF1A-212ENST00000539372 ZNF341Q9BYN7 854 aa23.49■■□□□ 1.35
TNFRSF1A-212ENST00000539372 LAMB1P07942 1786 aa23.49■■□□□ 1.35
TNFRSF1A-212ENST00000539372 TESPA1A2RU30 521 aaPredicted RBP23.48■■□□□ 1.35
TNFRSF1A-212ENST00000539372 MECOMQ03112 1051 aa23.48■■□□□ 1.35
TNFRSF1A-212ENST00000539372 TNNI3KQ59H18 835 aa23.48■■□□□ 1.35
TNFRSF1A-212ENST00000539372 SLF2Q8IX21 1173 aa23.48■■□□□ 1.35
TNFRSF1A-212ENST00000539372 FPGT-TNNI3KV9GXZ4 949 aa23.48■■□□□ 1.35
TNFRSF1A-212ENST00000539372 MYH2Q9UKX2 1941 aa23.48■■□□□ 1.35
TNFRSF1A-212ENST00000539372 CCL15-CCL14A0A0B4J2E2 113 aa23.47■■□□□ 1.35
TNFRSF1A-212ENST00000539372 SPDYE5A6NIY4 337 aa23.47■■□□□ 1.35
TNFRSF1A-212ENST00000539372 INPP5BP32019 993 aa23.47■■□□□ 1.35
TNFRSF1A-212ENST00000539372 MCAMP43121 646 aa23.47■■□□□ 1.35
TNFRSF1A-212ENST00000539372 BTDP43251 543 aa23.47■■□□□ 1.35
TNFRSF1A-212ENST00000539372 RGS3P49796 1198 aa23.47■■□□□ 1.35
TNFRSF1A-212ENST00000539372 GTF2A2P52657 109 aa23.47■■□□□ 1.35
TNFRSF1A-212ENST00000539372 CRHR2Q13324 411 aa23.47■■□□□ 1.35
TNFRSF1A-212ENST00000539372 CCL15Q16663 113 aa23.47■■□□□ 1.35
TNFRSF1A-212ENST00000539372 BRI3BPQ8WY22 251 aa23.47■■□□□ 1.35
TNFRSF1A-212ENST00000539372 MROH7-TTC4A0A0A0MT08 1334 aa23.46■■□□□ 1.35
TNFRSF1A-212ENST00000539372 UQCRFS1P1P0C7P4 283 aa23.46■■□□□ 1.35
TNFRSF1A-212ENST00000539372 ERO1BQ86YB8 467 aa23.46■■□□□ 1.35
TNFRSF1A-212ENST00000539372 ZNF384Q8TF68 577 aa23.46■■□□□ 1.35
TNFRSF1A-212ENST00000539372 DBNDD2Q9BQY9 259 aa23.46■■□□□ 1.35
TNFRSF1A-212ENST00000539372 TTC39AQ5SRH9 613 aa23.45■■□□□ 1.34
TNFRSF1A-212ENST00000539372 CEP85Q6P2H3 762 aa23.45■■□□□ 1.34
TNFRSF1A-212ENST00000539372 FAM163AQ96GL9 167 aaPredicted RBP23.45■■□□□ 1.34
TNFRSF1A-212ENST00000539372 IDI2Q9BXS1 227 aa23.45■■□□□ 1.34
TNFRSF1A-212ENST00000539372 GPR108Q9NPR9 543 aa23.45■■□□□ 1.34
TNFRSF1A-212ENST00000539372 SNRKQ9NRH2 765 aa23.45■■□□□ 1.34
TNFRSF1A-212ENST00000539372 RAI14Q9P0K7 980 aa23.45■■□□□ 1.34
TNFRSF1A-212ENST00000539372 NOP58Q9Y2X3 529 aaKnown RBP23.45■■□□□ 1.34
TNFRSF1A-212ENST00000539372 AK9Q5TCS8 1911 aa23.44■■□□□ 1.34
TNFRSF1A-212ENST00000539372 PICALMQ13492 652 aa23.44■■□□□ 1.34
TNFRSF1A-212ENST00000539372 PKN2Q16513 984 aaKnown RBP23.44■■□□□ 1.34
TNFRSF1A-212ENST00000539372 RFX7Q2KHR2 1363 aa23.43■■□□□ 1.34
TNFRSF1A-212ENST00000539372 IRF6O14896 467 aa23.43■■□□□ 1.34
TNFRSF1A-212ENST00000539372 ENTPD3O75355 529 aa23.43■■□□□ 1.34
TNFRSF1A-212ENST00000539372 WDHD1O75717 1129 aaPredicted RBP23.43■■□□□ 1.34
TNFRSF1A-212ENST00000539372 CCDC158Q5M9N0 1113 aa23.43■■□□□ 1.34
TNFRSF1A-212ENST00000539372 ZSCAN29Q8IWY8 852 aaPredicted RBP23.43■■□□□ 1.34
TNFRSF1A-212ENST00000539372 NSUN4Q96CB9 384 aaKnown RBP23.43■■□□□ 1.34
TNFRSF1A-212ENST00000539372 DDX4Q9NQI0 724 aaKnown RBP23.43■■□□□ 1.34
TNFRSF1A-212ENST00000539372 ZNF112Q9UJU3 913 aa23.43■■□□□ 1.34
TNFRSF1A-212ENST00000539372 HPS5Q9UPZ3 1129 aa23.43■■□□□ 1.34
TNFRSF1A-212ENST00000539372 GPR75-ASB3A0A0A6YYF3 556 aa23.42■■□□□ 1.34
TNFRSF1A-212ENST00000539372 GSTO1P78417 241 aa23.42■■□□□ 1.34
TNFRSF1A-212ENST00000539372 PPIL2Q13356 520 aa23.42■■□□□ 1.34
TNFRSF1A-212ENST00000539372 SH3BP5LQ7L8J4 393 aa23.42■■□□□ 1.34
TNFRSF1A-212ENST00000539372 FAM43AQ8N2R8 423 aa23.42■■□□□ 1.34
TNFRSF1A-212ENST00000539372 LRP2BPQ9P2M1 347 aa23.42■■□□□ 1.34
TNFRSF1A-212ENST00000539372 CETPP11597 493 aa23.41■■□□□ 1.34
TNFRSF1A-212ENST00000539372 MS4A1P11836 297 aa23.41■■□□□ 1.34
TNFRSF1A-212ENST00000539372 RHBDL3P58872 404 aa23.41■■□□□ 1.34
TNFRSF1A-212ENST00000539372 SNAPC2Q13487 334 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms